RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 NISCHQ9Y2I1 1504 aa19.11■□□□□ 0.65
AMBRA1-202ENST00000458649 DCAF8L2P0C7V8 631 aa18.98■□□□□ 0.63
AMBRA1-202ENST00000458649 SUPT5HO00267 1087 aaKnown RBP17.71■□□□□ 0.43
AMBRA1-202ENST00000458649 SHROOM4Q9ULL8 1493 aa17.63■□□□□ 0.41
AMBRA1-202ENST00000458649 FAM9AQ8IZU1 332 aaPredicted RBP17.29■□□□□ 0.36
AMBRA1-202ENST00000458649 MYT1Q01538 1121 aa17.05■□□□□ 0.32
AMBRA1-202ENST00000458649 PELP1Q8IZL8 1130 aaKnown RBP17.04■□□□□ 0.32
AMBRA1-202ENST00000458649 APLP2Q06481 763 aa16.97■□□□□ 0.31
AMBRA1-202ENST00000458649 EHMT2Q96KQ7 1210 aa16.77■□□□□ 0.27
AMBRA1-202ENST00000458649 TRIM41Q8WV44 630 aa16.49■□□□□ 0.23
AMBRA1-202ENST00000458649 ATP1B4Q9UN42 357 aaPredicted RBP16.36■□□□□ 0.21
AMBRA1-202ENST00000458649 PCGF6Q9BYE7 350 aa16.33■□□□□ 0.2
AMBRA1-202ENST00000458649 ERICH6Q7L0X2 663 aa16.3■□□□□ 0.2
AMBRA1-202ENST00000458649 RANGAP1P46060 587 aaPredicted RBP16.27■□□□□ 0.2
AMBRA1-202ENST00000458649 UBTFP17480 764 aaKnown RBP16.27■□□□□ 0.19
AMBRA1-202ENST00000458649 CENPBP07199 599 aaPredicted RBP16.24■□□□□ 0.19
AMBRA1-202ENST00000458649 ABCC9O60706 1549 aa16.2■□□□□ 0.18
AMBRA1-202ENST00000458649 CCER1Q8TC90 406 aaPredicted RBP16.18■□□□□ 0.18
AMBRA1-202ENST00000458649 TTBK1Q5TCY1 1321 aaPredicted RBP16.17■□□□□ 0.18
AMBRA1-202ENST00000458649 CHIC1Q5VXU3 224 aa16.13■□□□□ 0.17
AMBRA1-202ENST00000458649 MYT1LQ9UL68 1186 aa16.03■□□□□ 0.16
AMBRA1-202ENST00000458649 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16■□□□□ 0.15
AMBRA1-202ENST00000458649 HNRNPUL2Q1KMD3 747 aaKnown RBP16■□□□□ 0.15
AMBRA1-202ENST00000458649 ZEB1P37275 1124 aaPredicted RBP16■□□□□ 0.15
AMBRA1-202ENST00000458649 PABPN1Q86U42 306 aaKnown RBP eCLIP15.94■□□□□ 0.14
AMBRA1-202ENST00000458649 LOC105371045A0A1W2PR82 267 aa15.91■□□□□ 0.14
AMBRA1-202ENST00000458649 ZCCHC6Q5VYS8 1495 aaKnown RBP15.88■□□□□ 0.13
AMBRA1-202ENST00000458649 TRIM26Q12899 539 aaPredicted RBP15.85■□□□□ 0.13
AMBRA1-202ENST00000458649 CCDC180Q9P1Z9 1646 aa15.85■□□□□ 0.13
AMBRA1-202ENST00000458649 PPARGC1BQ86YN6 1023 aaKnown RBP15.81■□□□□ 0.12
AMBRA1-202ENST00000458649 NEFLP07196 543 aa15.66■□□□□ 0.1
AMBRA1-202ENST00000458649 HRCP23327 699 aa15.63■□□□□ 0.09
AMBRA1-202ENST00000458649 SCRIBQ14160 1630 aa15.59■□□□□ 0.09
AMBRA1-202ENST00000458649 FBLN2P98095 1184 aa15.58■□□□□ 0.08
AMBRA1-202ENST00000458649 YTHDC1Q96MU7 727 aaKnown RBP15.56■□□□□ 0.08
AMBRA1-202ENST00000458649 ITGAEP38570 1179 aa15.52■□□□□ 0.08
AMBRA1-202ENST00000458649 POLR3GLQ9BT43 218 aa15.35■□□□□ 0.05
AMBRA1-202ENST00000458649 NPM1P06748 294 aaKnown RBP eCLIP15.34■□□□□ 0.05
AMBRA1-202ENST00000458649 CSRNP3Q8WYN3 585 aa15.34■□□□□ 0.05
AMBRA1-202ENST00000458649 RB1CC1Q8TDY2 1594 aa15.32■□□□□ 0.04
AMBRA1-202ENST00000458649 CDK11AQ9UQ88 783 aaPredicted RBP15.32■□□□□ 0.04
AMBRA1-202ENST00000458649 FAM50AQ14320 339 aaKnown RBP15.31■□□□□ 0.04
AMBRA1-202ENST00000458649 SLC4A1APQ9BWU0 796 aaKnown RBP15.31■□□□□ 0.04
AMBRA1-202ENST00000458649 NACADO15069 1562 aa15.28■□□□□ 0.04
AMBRA1-202ENST00000458649 ESF1Q9H501 851 aaKnown RBP15.27■□□□□ 0.03
AMBRA1-202ENST00000458649 RTL5Q5HYW3 569 aaPredicted RBP15.27■□□□□ 0.03
AMBRA1-202ENST00000458649 DAXXQ9UER7 740 aaPredicted RBP15.26■□□□□ 0.03
AMBRA1-202ENST00000458649 TRIM52Q96A61 297 aa15.26■□□□□ 0.03
AMBRA1-202ENST00000458649 DCAF1Q9Y4B6 1507 aa15.26■□□□□ 0.03
AMBRA1-202ENST00000458649 RSF1Q96T23 1441 aaPredicted RBP15.23■□□□□ 0.03
AMBRA1-202ENST00000458649 BCANQ96GW7 911 aa15.14■□□□□ 0.01
AMBRA1-202ENST00000458649 DIEXFQ68CQ4 756 aaKnown RBP15.07■□□□□ 0
AMBRA1-202ENST00000458649 CHMP7Q8WUX9 453 aaPredicted RBP15.04■□□□□ -0
AMBRA1-202ENST00000458649 P3H3Q8IVL6 736 aa15.04■□□□□ -0
AMBRA1-202ENST00000458649 ZNF777Q9ULD5 760 aaPredicted RBP15.02■□□□□ -0
AMBRA1-202ENST00000458649 STAG3Q9UJ98 1225 aa14.99□□□□□ -0.01
AMBRA1-202ENST00000458649 ARID3CA6NKF2 412 aa14.99□□□□□ -0.01
AMBRA1-202ENST00000458649 NEFMP07197 916 aa14.97□□□□□ -0.01
AMBRA1-202ENST00000458649 MYO15BQ96JP2 1530 aa14.97□□□□□ -0.01
AMBRA1-202ENST00000458649 BAZ1AQ9NRL2 1556 aaPredicted RBP14.96□□□□□ -0.01
AMBRA1-202ENST00000458649 NEUROD1Q13562 356 aa14.96□□□□□ -0.01
AMBRA1-202ENST00000458649 CNGB1Q14028 1251 aaPredicted RBP14.96□□□□□ -0.01
AMBRA1-202ENST00000458649 CECR2Q9BXF3 1484 aa14.96□□□□□ -0.02
AMBRA1-202ENST00000458649 ZNF326Q5BKZ1 582 aaKnown RBP14.95□□□□□ -0.02
AMBRA1-202ENST00000458649 GTF3C3Q9Y5Q9 886 aa14.94□□□□□ -0.02
AMBRA1-202ENST00000458649 BAZ1BQ9UIG0 1483 aaKnown RBP14.92□□□□□ -0.02
AMBRA1-202ENST00000458649 GLIPR1L2Q4G1C9 344 aa14.92□□□□□ -0.02
AMBRA1-202ENST00000458649 EEA1Q15075 1411 aa14.91□□□□□ -0.02
AMBRA1-202ENST00000458649 ERCC6Q03468 1493 aa14.91□□□□□ -0.02
AMBRA1-202ENST00000458649 ZNF316A6NFI3 1004 aaPredicted RBP14.89□□□□□ -0.03
AMBRA1-202ENST00000458649 WRNQ14191 1432 aaPredicted RBP eCLIP14.88□□□□□ -0.03
AMBRA1-202ENST00000458649 EIF5BO60841 1220 aaKnown RBP14.87□□□□□ -0.03
AMBRA1-202ENST00000458649 TSPY4P0CV99 314 aa14.83□□□□□ -0.04
AMBRA1-202ENST00000458649 TSPY10P0CW01 314 aa14.83□□□□□ -0.04
AMBRA1-202ENST00000458649 ZBTB47Q9UFB7 747 aaPredicted RBP14.83□□□□□ -0.04
AMBRA1-202ENST00000458649 CLIP1P30622 1438 aa14.83□□□□□ -0.04
AMBRA1-202ENST00000458649 CHGAP10645 457 aaKnown RBP14.82□□□□□ -0.04
AMBRA1-202ENST00000458649 GOLGA3Q08378 1498 aa14.8□□□□□ -0.04
AMBRA1-202ENST00000458649 MROH2BQ7Z745 1585 aa14.79□□□□□ -0.04
AMBRA1-202ENST00000458649 PLPPR3Q6T4P5 718 aa14.78□□□□□ -0.04
AMBRA1-202ENST00000458649 SLC24A1O60721 1099 aa14.77□□□□□ -0.04
AMBRA1-202ENST00000458649 CLSPNQ9HAW4 1339 aa14.77□□□□□ -0.04
AMBRA1-202ENST00000458649 CEP162Q5TB80 1403 aa14.77□□□□□ -0.05
AMBRA1-202ENST00000458649 ACIN1Q9UKV3 1341 aaKnown RBP14.74□□□□□ -0.05
AMBRA1-202ENST00000458649 ANP32CO43423 234 aa14.74□□□□□ -0.05
AMBRA1-202ENST00000458649 MTUS2Q5JR59 1369 aa14.73□□□□□ -0.05
AMBRA1-202ENST00000458649 PLEKHD1A6NEE1 506 aa14.73□□□□□ -0.05
AMBRA1-202ENST00000458649 TNIKQ9UKE5 1360 aa14.73□□□□□ -0.05
AMBRA1-202ENST00000458649 KIF27Q86VH2 1401 aa14.71□□□□□ -0.05
AMBRA1-202ENST00000458649 CEP164Q9UPV0 1460 aa14.7□□□□□ -0.06
AMBRA1-202ENST00000458649 CCDC88BA6NC98 1476 aa14.66□□□□□ -0.06
AMBRA1-202ENST00000458649 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.65□□□□□ -0.062e-7■■□□□ 11.4
AMBRA1-202ENST00000458649 TONSLQ96HA7 1378 aa14.63□□□□□ -0.07
AMBRA1-202ENST00000458649 CANXP27824 592 aaKnown RBP14.63□□□□□ -0.07
AMBRA1-202ENST00000458649 KCNH8Q96L42 1107 aa14.63□□□□□ -0.07
AMBRA1-202ENST00000458649 ARID4BQ4LE39 1312 aaPredicted RBP14.63□□□□□ -0.07
AMBRA1-202ENST00000458649 PPP1R15AO75807 674 aaPredicted RBP14.61□□□□□ -0.07
AMBRA1-202ENST00000458649 SMARCA2P51531 1590 aa14.6□□□□□ -0.07
AMBRA1-202ENST00000458649 SOGA1O94964 1423 aa14.6□□□□□ -0.07
AMBRA1-202ENST00000458649 PDS5BQ9NTI5 1447 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms