RNA–Protein interactions for RNA: ENST00000473485.5

ATP6V0B-208, Transcript of ATPase H+ transporting V0 subunit b, humanhuman

TSL 2

Gene ATP6V0B, Length 1,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0B-208ENST00000473485 NISCHQ9Y2I1 1504 aa50.33■■■■■ 5.65
ATP6V0B-208ENST00000473485 CCDC180Q9P1Z9 1646 aa43.87■■■■■ 4.61
ATP6V0B-208ENST00000473485 ZCCHC6Q5VYS8 1495 aaKnown RBP42.37■■■■■ 4.37
ATP6V0B-208ENST00000473485 DCAF1Q9Y4B6 1507 aa41.74■■■■■ 4.27
ATP6V0B-208ENST00000473485 MYO15BQ96JP2 1530 aa41.18■■■■■ 4.18
ATP6V0B-208ENST00000473485 DCAF8L2P0C7V8 631 aa41.13■■■■■ 4.18
ATP6V0B-208ENST00000473485 ABCC9O60706 1549 aa41.01■■■■■ 4.16
ATP6V0B-208ENST00000473485 SHROOM4Q9ULL8 1493 aa40.97■■■■■ 4.15
ATP6V0B-208ENST00000473485 NACADO15069 1562 aa40.75■■■■■ 4.11
ATP6V0B-208ENST00000473485 RB1CC1Q8TDY2 1594 aa40.3■■■■■ 4.04
ATP6V0B-208ENST00000473485 SCRIBQ14160 1630 aa40.19■■■■■ 4.03
ATP6V0B-208ENST00000473485 SUPT5HO00267 1087 aaKnown RBP39.53■■■■□ 3.92
ATP6V0B-208ENST00000473485 UNC13AQ9UPW8 1703 aa39.49■■■■□ 3.91
ATP6V0B-208ENST00000473485 RSF1Q96T23 1441 aaPredicted RBP39.11■■■■□ 3.85
ATP6V0B-208ENST00000473485 BICRAQ9NZM4 1560 aa39.09■■■■□ 3.85
ATP6V0B-208ENST00000473485 CECR2Q9BXF3 1484 aa39■■■■□ 3.83
ATP6V0B-208ENST00000473485 BAZ1AQ9NRL2 1556 aaPredicted RBP38.86■■■■□ 3.81
ATP6V0B-208ENST00000473485 MROH2BQ7Z745 1585 aa38.84■■■■□ 3.81
ATP6V0B-208ENST00000473485 SMARCA4P51532 1647 aa38.64■■■■□ 3.78
ATP6V0B-208ENST00000473485 PABPN1Q86U42 306 aaKnown RBP eCLIP38.64■■■■□ 3.78
ATP6V0B-208ENST00000473485 WIZO95785 1651 aa38.52■■■■□ 3.76
ATP6V0B-208ENST00000473485 PEG3Q9GZU2 1588 aa38.25■■■■□ 3.71
ATP6V0B-208ENST00000473485 TOP2AP11388 1531 aaKnown RBP38.22■■■■□ 3.71
ATP6V0B-208ENST00000473485 CHIC1Q5VXU3 224 aa38.11■■■■□ 3.69
ATP6V0B-208ENST00000473485 SMARCA2P51531 1590 aa37.95■■■■□ 3.67
ATP6V0B-208ENST00000473485 ATAD2BQ9ULI0 1458 aa37.92■■■■□ 3.66
ATP6V0B-208ENST00000473485 EIF4G1Q04637 1599 aaKnown RBP37.86■■■■□ 3.65
ATP6V0B-208ENST00000473485 CCDC88BA6NC98 1476 aa37.76■■■■□ 3.63
ATP6V0B-208ENST00000473485 BAZ1BQ9UIG0 1483 aaKnown RBP37.7■■■■□ 3.63
ATP6V0B-208ENST00000473485 HMGXB3Q12766 1538 aa37.61■■■■□ 3.61
ATP6V0B-208ENST00000473485 NCAPD3P42695 1498 aa37.58■■■■□ 3.61
ATP6V0B-208ENST00000473485 TRIM41Q8WV44 630 aa37.23■■■■□ 3.55
ATP6V0B-208ENST00000473485 CC2D2AQ9P2K1 1620 aa37.21■■■■□ 3.55
ATP6V0B-208ENST00000473485 ABCC8Q09428 1581 aa37■■■■□ 3.51
ATP6V0B-208ENST00000473485 CFTRP13569 1480 aa36.81■■■■□ 3.48
ATP6V0B-208ENST00000473485 WRNQ14191 1432 aaPredicted RBP eCLIP36.78■■■■□ 3.48
ATP6V0B-208ENST00000473485 PRDM2Q13029 1718 aa36.71■■■■□ 3.47
ATP6V0B-208ENST00000473485 SYNJ1O43426 1573 aa36.64■■■■□ 3.46
ATP6V0B-208ENST00000473485 CADPSQ9ULU8 1353 aa36.58■■■■□ 3.45
ATP6V0B-208ENST00000473485 LOC105371045A0A1W2PR82 267 aa36.54■■■■□ 3.44
ATP6V0B-208ENST00000473485 TOP2BQ02880 1626 aa36.53■■■■□ 3.44
ATP6V0B-208ENST00000473485 BIVM-ERCC5R4GMW8 1640 aa36.52■■■■□ 3.44
ATP6V0B-208ENST00000473485 EEA1Q15075 1411 aa36.49■■■■□ 3.43
ATP6V0B-208ENST00000473485 FAM9AQ8IZU1 332 aaPredicted RBP36.43■■■■□ 3.42
ATP6V0B-208ENST00000473485 SOGA1O94964 1423 aa36.35■■■■□ 3.41
ATP6V0B-208ENST00000473485 CUX1P39880 1505 aa36.32■■■■□ 3.4
ATP6V0B-208ENST00000473485 LAMC3Q9Y6N6 1575 aa36.28■■■■□ 3.4
ATP6V0B-208ENST00000473485 RUSC2Q8N2Y8 1516 aa36.18■■■■□ 3.38
ATP6V0B-208ENST00000473485 FANCD2Q9BXW9 1451 aa36.18■■■■□ 3.38
ATP6V0B-208ENST00000473485 CSRNP3Q8WYN3 585 aa36.11■■■■□ 3.37
ATP6V0B-208ENST00000473485 NESP48681 1621 aa36.1■■■■□ 3.37
ATP6V0B-208ENST00000473485 DNAJC5BQ9UF47 199 aa36.02■■■■□ 3.36
ATP6V0B-208ENST00000473485 KIF21BO75037 1637 aa36■■■■□ 3.35
ATP6V0B-208ENST00000473485 DNMBPQ6XZF7 1577 aa35.96■■■■□ 3.35
ATP6V0B-208ENST00000473485 GOLGA3Q08378 1498 aa35.93■■■■□ 3.34
ATP6V0B-208ENST00000473485 CEP164Q9UPV0 1460 aa35.93■■■■□ 3.34
ATP6V0B-208ENST00000473485 PDS5BQ9NTI5 1447 aa35.93■■■■□ 3.34
ATP6V0B-208ENST00000473485 TNIKQ9UKE5 1360 aa35.87■■■■□ 3.33
ATP6V0B-208ENST00000473485 FGD5Q6ZNL6 1462 aa35.87■■■■□ 3.33
ATP6V0B-208ENST00000473485 KIF27Q86VH2 1401 aa35.84■■■■□ 3.33
ATP6V0B-208ENST00000473485 TOPBP1Q92547 1522 aa35.83■■■■□ 3.33
ATP6V0B-208ENST00000473485 EHMT2Q96KQ7 1210 aa35.79■■■■□ 3.32
ATP6V0B-208ENST00000473485 KIF21AQ7Z4S6 1674 aa35.74■■■■□ 3.31
ATP6V0B-208ENST00000473485 URB2Q14146 1524 aaKnown RBP35.72■■■■□ 3.31
ATP6V0B-208ENST00000473485 ERICH3Q5RHP9 1530 aa35.72■■■■□ 3.31
ATP6V0B-208ENST00000473485 PRXQ9BXM0 1461 aa35.72■■■■□ 3.31
ATP6V0B-208ENST00000473485 POLA1P09884 1462 aaPredicted RBP35.68■■■■□ 3.3
ATP6V0B-208ENST00000473485 CEP162Q5TB80 1403 aa35.65■■■■□ 3.3
ATP6V0B-208ENST00000473485 CUX2O14529 1486 aa35.65■■■■□ 3.3
ATP6V0B-208ENST00000473485 RAPGEF2Q9Y4G8 1499 aa35.64■■■■□ 3.3
ATP6V0B-208ENST00000473485 ABCA10Q8WWZ4 1543 aa35.62■■■■□ 3.29
ATP6V0B-208ENST00000473485 UBTFP17480 764 aaKnown RBP35.57■■■■□ 3.28
ATP6V0B-208ENST00000473485 WDR97A6NE52 1622 aa35.52■■■■□ 3.28
ATP6V0B-208ENST00000473485 RAD54L2Q9Y4B4 1467 aa35.48■■■■□ 3.27
ATP6V0B-208ENST00000473485 IGF1RP08069 1367 aa35.48■■■■□ 3.27
ATP6V0B-208ENST00000473485 MRC2Q9UBG0 1479 aa35.47■■■■□ 3.27
ATP6V0B-208ENST00000473485 ABCA5Q8WWZ7 1642 aa35.33■■■■□ 3.25
ATP6V0B-208ENST00000473485 TARBP1Q13395 1621 aaKnown RBP35.32■■■■□ 3.24
ATP6V0B-208ENST00000473485 CLIP1P30622 1438 aa35.32■■■■□ 3.24
ATP6V0B-208ENST00000473485 WDR62O43379 1518 aa35.31■■■■□ 3.24
ATP6V0B-208ENST00000473485 CARMIL1Q5VZK9 1371 aa35.29■■■■□ 3.24
ATP6V0B-208ENST00000473485 CUL7Q14999 1698 aa35.29■■■■□ 3.24
ATP6V0B-208ENST00000473485 TRIM26Q12899 539 aaPredicted RBP35.19■■■■□ 3.22
ATP6V0B-208ENST00000473485 GAPVD1Q14C86 1478 aa35.16■■■■□ 3.22
ATP6V0B-208ENST00000473485 ERCC6Q03468 1493 aa35.15■■■■□ 3.22
ATP6V0B-208ENST00000473485 THOC2Q8NI27 1593 aaKnown RBP35.15■■■■□ 3.22
ATP6V0B-208ENST00000473485 PCGF6Q9BYE7 350 aa35.12■■■■□ 3.21
ATP6V0B-208ENST00000473485 IFT140Q96RY7 1462 aa35.09■■■■□ 3.21
ATP6V0B-208ENST00000473485 VPS8Q8N3P4 1428 aa35.09■■■■□ 3.21
ATP6V0B-208ENST00000473485 TDRD9Q8NDG6 1382 aaKnown RBP35.08■■■■□ 3.21
ATP6V0B-208ENST00000473485 PBRM1Q86U86 1689 aa34.99■■■■□ 3.19
ATP6V0B-208ENST00000473485 ARAP1Q96P48 1450 aa34.98■■■■□ 3.19
ATP6V0B-208ENST00000473485 ARHGAP35Q9NRY4 1499 aa34.92■■■■□ 3.18
ATP6V0B-208ENST00000473485 CTTNBP2Q8WZ74 1663 aa34.9■■■■□ 3.18
ATP6V0B-208ENST00000473485 GRIN2BQ13224 1484 aa34.87■■■■□ 3.17
ATP6V0B-208ENST00000473485 AQRO60306 1485 aaKnown RBP eCLIP34.84■■■■□ 3.172e-9■■■■■ 47
ATP6V0B-208ENST00000473485 ADAMTS12P58397 1594 aa34.83■■■■□ 3.17
ATP6V0B-208ENST00000473485 FHAD1B1AJZ9 1412 aa34.82■■■■□ 3.16
ATP6V0B-208ENST00000473485 ZNF608Q9ULD9 1512 aaPredicted RBP34.8■■■■□ 3.16
ATP6V0B-208ENST00000473485 RANGAP1P46060 587 aaPredicted RBP34.77■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms