RNA–Protein interactions for RNA: ENST00000445776.1

PSMD4-205, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 3

Gene PSMD4, Length 703 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-205ENST00000445776 NISCHQ9Y2I1 1504 aa43.51■■■■■ 4.56
PSMD4-205ENST00000445776 CCDC180Q9P1Z9 1646 aa39.04■■■■□ 3.84
PSMD4-205ENST00000445776 ABCC9O60706 1549 aa39.02■■■■□ 3.84
PSMD4-205ENST00000445776 RB1CC1Q8TDY2 1594 aa37.14■■■■□ 3.54
PSMD4-205ENST00000445776 NACADO15069 1562 aa36.92■■■■□ 3.5
PSMD4-205ENST00000445776 DNAJC5BQ9UF47 199 aa36.77■■■■□ 3.48
PSMD4-205ENST00000445776 DCAF8L2P0C7V8 631 aa36.52■■■■□ 3.44
PSMD4-205ENST00000445776 MYO15BQ96JP2 1530 aa36.49■■■■□ 3.43
PSMD4-205ENST00000445776 UNC13AQ9UPW8 1703 aa36.35■■■■□ 3.41
PSMD4-205ENST00000445776 PABPN1Q86U42 306 aaKnown RBP eCLIP36.31■■■■□ 3.4
PSMD4-205ENST00000445776 BICRAQ9NZM4 1560 aa36.18■■■■□ 3.38
PSMD4-205ENST00000445776 ZCCHC6Q5VYS8 1495 aaKnown RBP36.06■■■■□ 3.36
PSMD4-205ENST00000445776 DCAF1Q9Y4B6 1507 aa35.98■■■■□ 3.35
PSMD4-205ENST00000445776 SHROOM4Q9ULL8 1493 aa35.66■■■■□ 3.3
PSMD4-205ENST00000445776 SCRIBQ14160 1630 aa35.5■■■■□ 3.27
PSMD4-205ENST00000445776 CC2D2AQ9P2K1 1620 aa35.29■■■■□ 3.24
PSMD4-205ENST00000445776 EIF4G1Q04637 1599 aaKnown RBP35.22■■■■□ 3.23
PSMD4-205ENST00000445776 CECR2Q9BXF3 1484 aa35.18■■■■□ 3.22
PSMD4-205ENST00000445776 NCAPD3P42695 1498 aa34.14■■■■□ 3.06
PSMD4-205ENST00000445776 ATAD2BQ9ULI0 1458 aa34■■■■□ 3.03
PSMD4-205ENST00000445776 SMARCA4P51532 1647 aa33.93■■■■□ 3.02
PSMD4-205ENST00000445776 SMARCA2P51531 1590 aa33.85■■■■□ 3.01
PSMD4-205ENST00000445776 HMGXB3Q12766 1538 aa33.84■■■■□ 3.01
PSMD4-205ENST00000445776 DNAJC5Q9H3Z4 198 aa33.76■■■□□ 2.99
PSMD4-205ENST00000445776 BAZ1AQ9NRL2 1556 aaPredicted RBP33.73■■■□□ 2.99
PSMD4-205ENST00000445776 CUX2O14529 1486 aa33.69■■■□□ 2.98
PSMD4-205ENST00000445776 PEG3Q9GZU2 1588 aa33.68■■■□□ 2.98
PSMD4-205ENST00000445776 ERCC6Q03468 1493 aa33.63■■■□□ 2.97
PSMD4-205ENST00000445776 BAZ1BQ9UIG0 1483 aaKnown RBP33.58■■■□□ 2.97
PSMD4-205ENST00000445776 NESP48681 1621 aa33.56■■■□□ 2.96
PSMD4-205ENST00000445776 MROH2BQ7Z745 1585 aa33.52■■■□□ 2.96
PSMD4-205ENST00000445776 LAMC3Q9Y6N6 1575 aa33.31■■■□□ 2.92
PSMD4-205ENST00000445776 THOC2Q8NI27 1593 aaKnown RBP33.26■■■□□ 2.91
PSMD4-205ENST00000445776 KIF21AQ7Z4S6 1674 aa33.1■■■□□ 2.89
PSMD4-205ENST00000445776 PDS5BQ9NTI5 1447 aa33.09■■■□□ 2.89
PSMD4-205ENST00000445776 WIZO95785 1651 aa33.08■■■□□ 2.89
PSMD4-205ENST00000445776 CADPSQ9ULU8 1353 aa33.05■■■□□ 2.88
PSMD4-205ENST00000445776 MRC2Q9UBG0 1479 aa32.82■■■□□ 2.84
PSMD4-205ENST00000445776 RSF1Q96T23 1441 aaPredicted RBP32.81■■■□□ 2.84
PSMD4-205ENST00000445776 WDR62O43379 1518 aa32.79■■■□□ 2.84
PSMD4-205ENST00000445776 CFTRP13569 1480 aa32.69■■■□□ 2.82
PSMD4-205ENST00000445776 TOP2AP11388 1531 aaKnown RBP32.67■■■□□ 2.82
PSMD4-205ENST00000445776 CEP164Q9UPV0 1460 aa32.65■■■□□ 2.82
PSMD4-205ENST00000445776 FANCD2Q9BXW9 1451 aa32.64■■■□□ 2.82
PSMD4-205ENST00000445776 URB2Q14146 1524 aaKnown RBP32.42■■■□□ 2.78
PSMD4-205ENST00000445776 CCDC88BA6NC98 1476 aa32.32■■■□□ 2.76
PSMD4-205ENST00000445776 PRDM2Q13029 1718 aa32.29■■■□□ 2.76
PSMD4-205ENST00000445776 OSCARQ8IYS5 282 aa32.1■■■□□ 2.73
PSMD4-205ENST00000445776 TRIM41Q8WV44 630 aa32.09■■■□□ 2.73
PSMD4-205ENST00000445776 TOPBP1Q92547 1522 aa32.04■■■□□ 2.72
PSMD4-205ENST00000445776 IFT140Q96RY7 1462 aa32.03■■■□□ 2.72
PSMD4-205ENST00000445776 ZNF608Q9ULD9 1512 aaPredicted RBP32.01■■■□□ 2.72
PSMD4-205ENST00000445776 ABCC8Q09428 1581 aa31.94■■■□□ 2.7
PSMD4-205ENST00000445776 DNMBPQ6XZF7 1577 aa31.9■■■□□ 2.7
PSMD4-205ENST00000445776 EIF4G3O43432 1585 aaKnown RBP31.81■■■□□ 2.68
PSMD4-205ENST00000445776 TARBP1Q13395 1621 aaKnown RBP31.8■■■□□ 2.68
PSMD4-205ENST00000445776 RIMBP3CA6NJZ7 1639 aa31.72■■■□□ 2.67
PSMD4-205ENST00000445776 RIMBP3BA6NNM3 1639 aa31.72■■■□□ 2.67
PSMD4-205ENST00000445776 RIMBP3Q9UFD9 1639 aa31.72■■■□□ 2.67
PSMD4-205ENST00000445776 POLA1P09884 1462 aaPredicted RBP31.72■■■□□ 2.67
PSMD4-205ENST00000445776 AQRO60306 1485 aaKnown RBP eCLIP31.7■■■□□ 2.661e-8■□□□□ 10
PSMD4-205ENST00000445776 ARHGEF11O15085 1522 aa31.62■■■□□ 2.65
PSMD4-205ENST00000445776 RAD54L2Q9Y4B4 1467 aa31.59■■■□□ 2.65
PSMD4-205ENST00000445776 CHD1O14646 1710 aa31.55■■■□□ 2.64
PSMD4-205ENST00000445776 SOGA1O94964 1423 aa31.53■■■□□ 2.64
PSMD4-205ENST00000445776 CUX1P39880 1505 aa31.49■■■□□ 2.63
PSMD4-205ENST00000445776 FGD5Q6ZNL6 1462 aa31.48■■■□□ 2.63
PSMD4-205ENST00000445776 TDRD9Q8NDG6 1382 aaKnown RBP31.47■■■□□ 2.63
PSMD4-205ENST00000445776 WDR97A6NE52 1622 aa31.45■■■□□ 2.62
PSMD4-205ENST00000445776 SNAPC4Q5SXM2 1469 aa31.35■■■□□ 2.61
PSMD4-205ENST00000445776 FBLN2P98095 1184 aa31.35■■■□□ 2.61
PSMD4-205ENST00000445776 ARAP1Q96P48 1450 aa31.33■■■□□ 2.61
PSMD4-205ENST00000445776 CYB5RLQ6IPT4 315 aa31.32■■■□□ 2.6
PSMD4-205ENST00000445776 MAGI1Q96QZ7 1491 aaPredicted RBP31.29■■■□□ 2.6
PSMD4-205ENST00000445776 CLASP1Q7Z460 1538 aa31.29■■■□□ 2.6
PSMD4-205ENST00000445776 GRIN2BQ13224 1484 aa31.27■■■□□ 2.6
PSMD4-205ENST00000445776 SYNJ2O15056 1496 aa31.19■■■□□ 2.58
PSMD4-205ENST00000445776 CHMP7Q8WUX9 453 aaPredicted RBP31.17■■■□□ 2.58
PSMD4-205ENST00000445776 ABCA10Q8WWZ4 1543 aa31.17■■■□□ 2.58
PSMD4-205ENST00000445776 SYNJ1O43426 1573 aa31.16■■■□□ 2.58
PSMD4-205ENST00000445776 GAPVD1Q14C86 1478 aa31.15■■■□□ 2.58
PSMD4-205ENST00000445776 SUPT5HO00267 1087 aaKnown RBP31.14■■■□□ 2.58
PSMD4-205ENST00000445776 ABCA5Q8WWZ7 1642 aa31.13■■■□□ 2.57
PSMD4-205ENST00000445776 PBRM1Q86U86 1689 aa31.13■■■□□ 2.57
PSMD4-205ENST00000445776 BIVM-ERCC5R4GMW8 1640 aa30.97■■■□□ 2.55
PSMD4-205ENST00000445776 WRNQ14191 1432 aaPredicted RBP eCLIP30.97■■■□□ 2.55
PSMD4-205ENST00000445776 TOP2BQ02880 1626 aa30.95■■■□□ 2.55
PSMD4-205ENST00000445776 TRHP20396 242 aaPredicted RBP30.9■■■□□ 2.54
PSMD4-205ENST00000445776 GRIN2AQ12879 1464 aa30.89■■■□□ 2.53
PSMD4-205ENST00000445776 ADAMTS12P58397 1594 aa30.87■■■□□ 2.53
PSMD4-205ENST00000445776 NUP160Q12769 1436 aa30.83■■■□□ 2.53
PSMD4-205ENST00000445776 CEP170Q5SW79 1584 aa30.79■■■□□ 2.52
PSMD4-205ENST00000445776 ERCC6L2Q5T890 1561 aa30.78■■■□□ 2.52
PSMD4-205ENST00000445776 FHAD1B1AJZ9 1412 aa30.76■■■□□ 2.51
PSMD4-205ENST00000445776 ERICH3Q5RHP9 1530 aa30.76■■■□□ 2.51
PSMD4-205ENST00000445776 SHROOM2Q13796 1616 aa30.71■■■□□ 2.51
PSMD4-205ENST00000445776 PRG4Q92954 1404 aaPredicted RBP30.46■■■□□ 2.47
PSMD4-205ENST00000445776 JPH4Q96JJ6 628 aa30.45■■■□□ 2.47
PSMD4-205ENST00000445776 RUSC2Q8N2Y8 1516 aa30.44■■■□□ 2.46
PSMD4-205ENST00000445776 IGF1RP08069 1367 aa30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 187.6 ms