RNA–Protein interactions for RNA: ENST00000634348.1

SRSF4-208, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 5

Gene SRSF4, Length 8,128 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-208ENST00000634348 DCAF8L2P0C7V8 631 aa19.24■□□□□ 0.67
SRSF4-208ENST00000634348 PELP1Q8IZL8 1130 aaKnown RBP19.12■□□□□ 0.65
SRSF4-208ENST00000634348 MYT1Q01538 1121 aa18.79■□□□□ 0.6
SRSF4-208ENST00000634348 ERICH6Q7L0X2 663 aa18.39■□□□□ 0.53
SRSF4-208ENST00000634348 EHMT2Q96KQ7 1210 aa18.3■□□□□ 0.52
SRSF4-208ENST00000634348 SUPT5HO00267 1087 aaKnown RBP18.2■□□□□ 0.5
SRSF4-208ENST00000634348 CCER1Q8TC90 406 aaPredicted RBP18.17■□□□□ 0.5
SRSF4-208ENST00000634348 TTBK1Q5TCY1 1321 aaPredicted RBP17.87■□□□□ 0.45
SRSF4-208ENST00000634348 SHROOM4Q9ULL8 1493 aa17.72■□□□□ 0.43
SRSF4-208ENST00000634348 YTHDC1Q96MU7 727 aaKnown RBP17.71■□□□□ 0.43
SRSF4-208ENST00000634348 CENPBP07199 599 aaPredicted RBP17.7■□□□□ 0.42
SRSF4-208ENST00000634348 FAM9AQ8IZU1 332 aaPredicted RBP17.38■□□□□ 0.37
SRSF4-208ENST00000634348 APLP2Q06481 763 aa17.34■□□□□ 0.37
SRSF4-208ENST00000634348 NEFLP07196 543 aa17.31■□□□□ 0.36
SRSF4-208ENST00000634348 PCGF6Q9BYE7 350 aa17.29■□□□□ 0.36
SRSF4-208ENST00000634348 RANGAP1P46060 587 aaPredicted RBP17.28■□□□□ 0.36
SRSF4-208ENST00000634348 DAXXQ9UER7 740 aaPredicted RBP17.2■□□□□ 0.34
SRSF4-208ENST00000634348 ATP1B4Q9UN42 357 aaPredicted RBP17.03■□□□□ 0.32
SRSF4-208ENST00000634348 ZEB1P37275 1124 aaPredicted RBP17■□□□□ 0.31
SRSF4-208ENST00000634348 RTL5Q5HYW3 569 aaPredicted RBP16.96■□□□□ 0.31
SRSF4-208ENST00000634348 PPARGC1BQ86YN6 1023 aaKnown RBP16.79■□□□□ 0.28
SRSF4-208ENST00000634348 GLIPR1L2Q4G1C9 344 aa16.75■□□□□ 0.27
SRSF4-208ENST00000634348 ZNF316A6NFI3 1004 aaPredicted RBP16.71■□□□□ 0.27
SRSF4-208ENST00000634348 CNGB1Q14028 1251 aaPredicted RBP16.65■□□□□ 0.26
SRSF4-208ENST00000634348 UBTFP17480 764 aaKnown RBP16.61■□□□□ 0.25
SRSF4-208ENST00000634348 TRIM41Q8WV44 630 aa16.57■□□□□ 0.24
SRSF4-208ENST00000634348 POLR3GLQ9BT43 218 aa16.57■□□□□ 0.24
SRSF4-208ENST00000634348 EIF5BO60841 1220 aaKnown RBP16.56■□□□□ 0.24
SRSF4-208ENST00000634348 NISCHQ9Y2I1 1504 aa16.44■□□□□ 0.22
SRSF4-208ENST00000634348 ITGAEP38570 1179 aa16.44■□□□□ 0.22
SRSF4-208ENST00000634348 CHIC1Q5VXU3 224 aa16.41■□□□□ 0.22
SRSF4-208ENST00000634348 MYT1LQ9UL68 1186 aa16.37■□□□□ 0.21
SRSF4-208ENST00000634348 CLSPNQ9HAW4 1339 aa16.32■□□□□ 0.2
SRSF4-208ENST00000634348 SLC4A1APQ9BWU0 796 aaKnown RBP16.24■□□□□ 0.19
SRSF4-208ENST00000634348 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.23■□□□□ 0.19
SRSF4-208ENST00000634348 HNRNPUL2Q1KMD3 747 aaKnown RBP16.23■□□□□ 0.19
SRSF4-208ENST00000634348 HRCP23327 699 aa16.14■□□□□ 0.17
SRSF4-208ENST00000634348 ANP32BQ92688 251 aaKnown RBP16.09■□□□□ 0.17
SRSF4-208ENST00000634348 CDK11AQ9UQ88 783 aaPredicted RBP16.08■□□□□ 0.16
SRSF4-208ENST00000634348 LOC105371045A0A1W2PR82 267 aa16.06■□□□□ 0.16
SRSF4-208ENST00000634348 TRIM26Q12899 539 aaPredicted RBP16.04■□□□□ 0.16
SRSF4-208ENST00000634348 BCL11AQ9H165 835 aa16.04■□□□□ 0.16
SRSF4-208ENST00000634348 BCANQ96GW7 911 aa16■□□□□ 0.15
SRSF4-208ENST00000634348 TNNT2P45379 298 aaPredicted RBP15.98■□□□□ 0.15
SRSF4-208ENST00000634348 ANP32AP39687 249 aaKnown RBP15.93■□□□□ 0.14
SRSF4-208ENST00000634348 GTF3C3Q9Y5Q9 886 aa15.9■□□□□ 0.14
SRSF4-208ENST00000634348 DIEXFQ68CQ4 756 aaKnown RBP15.83■□□□□ 0.13
SRSF4-208ENST00000634348 CDK11BP21127 795 aaKnown RBP15.82■□□□□ 0.12
SRSF4-208ENST00000634348 ZBTB47Q9UFB7 747 aaPredicted RBP15.82■□□□□ 0.12
SRSF4-208ENST00000634348 SLC24A1O60721 1099 aa15.8■□□□□ 0.12
SRSF4-208ENST00000634348 NEUROD1Q13562 356 aa15.79■□□□□ 0.12
SRSF4-208ENST00000634348 FAM50AQ14320 339 aaKnown RBP15.74■□□□□ 0.11
SRSF4-208ENST00000634348 ZNF326Q5BKZ1 582 aaKnown RBP15.73■□□□□ 0.11
SRSF4-208ENST00000634348 TRIM52Q96A61 297 aa15.7■□□□□ 0.1
SRSF4-208ENST00000634348 TRIM44Q96DX7 344 aaPredicted RBP15.66■□□□□ 0.1
SRSF4-208ENST00000634348 NPM2Q86SE8 214 aaKnown RBP15.63■□□□□ 0.09
SRSF4-208ENST00000634348 HSP90AA1P07900 732 aaKnown RBP15.6■□□□□ 0.09
SRSF4-208ENST00000634348 NBR1Q14596 966 aa15.59■□□□□ 0.09
SRSF4-208ENST00000634348 NCLP19338 710 aaKnown RBP15.57■□□□□ 0.08
SRSF4-208ENST00000634348 CANXP27824 592 aaKnown RBP15.54■□□□□ 0.08
SRSF4-208ENST00000634348 AMER1Q5JTC6 1135 aaPredicted RBP15.49■□□□□ 0.07
SRSF4-208ENST00000634348 ARXQ96QS3 562 aa15.49■□□□□ 0.07
SRSF4-208ENST00000634348 ANP32CO43423 234 aa15.49■□□□□ 0.07
SRSF4-208ENST00000634348 UPF2Q9HAU5 1272 aaKnown RBP15.46■□□□□ 0.07
SRSF4-208ENST00000634348 ACIN1Q9UKV3 1341 aaKnown RBP15.46■□□□□ 0.07
SRSF4-208ENST00000634348 ARID3CA6NKF2 412 aa15.46■□□□□ 0.06
SRSF4-208ENST00000634348 NAP1L5Q96NT1 182 aaPredicted RBP15.4■□□□□ 0.06
SRSF4-208ENST00000634348 ERICH6BQ5W0A0 696 aa15.39■□□□□ 0.05
SRSF4-208ENST00000634348 FBLN2P98095 1184 aa15.37■□□□□ 0.05
SRSF4-208ENST00000634348 PLPPR3Q6T4P5 718 aa15.36■□□□□ 0.05
SRSF4-208ENST00000634348 SALL2Q9Y467 1007 aaPredicted RBP15.34■□□□□ 0.05
SRSF4-208ENST00000634348 ANP32EQ9BTT0 268 aa15.33■□□□□ 0.04
SRSF4-208ENST00000634348 DNTTIP2Q5QJE6 756 aaKnown RBP15.31■□□□□ 0.04
SRSF4-208ENST00000634348 P3H3Q8IVL6 736 aa15.3■□□□□ 0.04
SRSF4-208ENST00000634348 NEFMP07197 916 aa15.28■□□□□ 0.04
SRSF4-208ENST00000634348 CALRP27797 417 aaKnown RBP15.27■□□□□ 0.04
SRSF4-208ENST00000634348 FKBP8Q14318 412 aa15.25■□□□□ 0.03
SRSF4-208ENST00000634348 RTN4Q9NQC3 1192 aaKnown RBP15.23■□□□□ 0.03
SRSF4-208ENST00000634348 PTMAP06454 111 aaKnown RBP15.21■□□□□ 0.03
SRSF4-208ENST00000634348 TNNT3P45378 269 aaPredicted RBP15.21■□□□□ 0.03
SRSF4-208ENST00000634348 ZNF777Q9ULD5 760 aaPredicted RBP15.2■□□□□ 0.02
SRSF4-208ENST00000634348 PABPN1Q86U42 306 aaKnown RBP eCLIP15.19■□□□□ 0.022e-8■□□□□ 8.2
SRSF4-208ENST00000634348 FAM9BQ8IZU0 186 aa15.16■□□□□ 0.02
SRSF4-208ENST00000634348 CHGAP10645 457 aaKnown RBP15.14■□□□□ 0.01
SRSF4-208ENST00000634348 SENP3Q9H4L4 574 aaPredicted RBP15.14■□□□□ 0.01
SRSF4-208ENST00000634348 PLEKHG5O94827 1062 aa15.13■□□□□ 0.01
SRSF4-208ENST00000634348 DDRGK1Q96HY6 314 aa15.12■□□□□ 0.01
SRSF4-208ENST00000634348 GOLGA6L22H0YM25 854 aa15.12■□□□□ 0.01
SRSF4-208ENST00000634348 HNRNPUQ00839 825 aaKnown RBP eCLIP15.11■□□□□ 0.01
SRSF4-208ENST00000634348 IRX6P78412 446 aaPredicted RBP15.1■□□□□ 0.01
SRSF4-208ENST00000634348 BECN1Q14457 450 aa15.09■□□□□ 0.01
SRSF4-208ENST00000634348 SENP3-EIF4A1A0A087X0R7 540 aa15.07■□□□□ 0
SRSF4-208ENST00000634348 PTMSP20962 102 aa15.07■□□□□ 0
SRSF4-208ENST00000634348 DDX10Q13206 875 aaKnown RBP15.06■□□□□ 0
SRSF4-208ENST00000634348 A0A0G2JS52 829 aa15.06■□□□□ 0
SRSF4-208ENST00000634348 CHAF1AQ13111 956 aaPredicted RBP15.05■□□□□ -0
SRSF4-208ENST00000634348 CCDC136Q96JN2 1154 aa15.04■□□□□ -0
SRSF4-208ENST00000634348 ZRSR1Q15695 479 aaKnown RBP15.02□□□□□ -0.01
SRSF4-208ENST00000634348 STAG3Q9UJ98 1225 aa15.01□□□□□ -0.01
SRSF4-208ENST00000634348 SCAF1Q9H7N4 1312 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms