RNA–Protein interactions for RNA: ENST00000506523.6

RBM4-207, Transcript of RNA binding motif protein 4, humanhuman

TSL 3 BASIC

Gene RBM4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM4-207ENST00000506523 NISCHQ9Y2I1 1504 aa33.38■■■□□ 2.93
RBM4-207ENST00000506523 CCDC180Q9P1Z9 1646 aa30.04■■■□□ 2.4
RBM4-207ENST00000506523 ABCC9O60706 1549 aa30.01■■■□□ 2.39
RBM4-207ENST00000506523 RB1CC1Q8TDY2 1594 aa28.58■■■□□ 2.17
RBM4-207ENST00000506523 NACADO15069 1562 aa28.37■■■□□ 2.13
RBM4-207ENST00000506523 DNAJC5BQ9UF47 199 aa28.2■■■□□ 2.1
RBM4-207ENST00000506523 DCAF8L2P0C7V8 631 aa28.03■■■□□ 2.08
RBM4-207ENST00000506523 MYO15BQ96JP2 1530 aa28■■■□□ 2.07
RBM4-207ENST00000506523 UNC13AQ9UPW8 1703 aa27.98■■■□□ 2.07
RBM4-207ENST00000506523 PABPN1Q86U42 306 aaKnown RBP eCLIP27.88■■■□□ 2.05
RBM4-207ENST00000506523 BICRAQ9NZM4 1560 aa27.78■■■□□ 2.04
RBM4-207ENST00000506523 ZCCHC6Q5VYS8 1495 aaKnown RBP27.69■■■□□ 2.02
RBM4-207ENST00000506523 DCAF1Q9Y4B6 1507 aa27.62■■■□□ 2.01
RBM4-207ENST00000506523 SHROOM4Q9ULL8 1493 aa27.42■■□□□ 1.98
RBM4-207ENST00000506523 SCRIBQ14160 1630 aa27.3■■□□□ 1.96
RBM4-207ENST00000506523 CC2D2AQ9P2K1 1620 aa27.15■■□□□ 1.94
RBM4-207ENST00000506523 EIF4G1Q04637 1599 aaKnown RBP27.09■■□□□ 1.93
RBM4-207ENST00000506523 CECR2Q9BXF3 1484 aa27.06■■□□□ 1.92
RBM4-207ENST00000506523 NCAPD3P42695 1498 aa26.19■■□□□ 1.78
RBM4-207ENST00000506523 ATAD2BQ9ULI0 1458 aa26.1■■□□□ 1.77
RBM4-207ENST00000506523 SMARCA4P51532 1647 aa26.07■■□□□ 1.76
RBM4-207ENST00000506523 SMARCA2P51531 1590 aa26.03■■□□□ 1.76
RBM4-207ENST00000506523 HMGXB3Q12766 1538 aa26.02■■□□□ 1.76
RBM4-207ENST00000506523 DNAJC5Q9H3Z4 198 aa25.94■■□□□ 1.74
RBM4-207ENST00000506523 CUX2O14529 1486 aa25.93■■□□□ 1.74
RBM4-207ENST00000506523 BAZ1AQ9NRL2 1556 aaPredicted RBP25.92■■□□□ 1.74
RBM4-207ENST00000506523 ERCC6Q03468 1493 aa25.9■■□□□ 1.74
RBM4-207ENST00000506523 PEG3Q9GZU2 1588 aa25.86■■□□□ 1.73
RBM4-207ENST00000506523 BAZ1BQ9UIG0 1483 aaKnown RBP25.82■■□□□ 1.72
RBM4-207ENST00000506523 NESP48681 1621 aa25.78■■□□□ 1.72
RBM4-207ENST00000506523 MROH2BQ7Z745 1585 aa25.72■■□□□ 1.71
RBM4-207ENST00000506523 LAMC3Q9Y6N6 1575 aa25.62■■□□□ 1.69
RBM4-207ENST00000506523 THOC2Q8NI27 1593 aaKnown RBP25.6■■□□□ 1.69
RBM4-207ENST00000506523 KIF21AQ7Z4S6 1674 aa25.48■■□□□ 1.67
RBM4-207ENST00000506523 PDS5BQ9NTI5 1447 aa25.43■■□□□ 1.66
RBM4-207ENST00000506523 WIZO95785 1651 aa25.41■■□□□ 1.66
RBM4-207ENST00000506523 CADPSQ9ULU8 1353 aa25.36■■□□□ 1.65
RBM4-207ENST00000506523 MRC2Q9UBG0 1479 aa25.24■■□□□ 1.63
RBM4-207ENST00000506523 WDR62O43379 1518 aa25.22■■□□□ 1.63
RBM4-207ENST00000506523 RSF1Q96T23 1441 aaPredicted RBP25.15■■□□□ 1.62
RBM4-207ENST00000506523 CEP164Q9UPV0 1460 aa25.12■■□□□ 1.61
RBM4-207ENST00000506523 TOP2AP11388 1531 aaKnown RBP25.1■■□□□ 1.61
RBM4-207ENST00000506523 CFTRP13569 1480 aa25.09■■□□□ 1.61
RBM4-207ENST00000506523 FANCD2Q9BXW9 1451 aa25.09■■□□□ 1.61
RBM4-207ENST00000506523 URB2Q14146 1524 aaKnown RBP24.9■■□□□ 1.58
RBM4-207ENST00000506523 PRDM2Q13029 1718 aa24.88■■□□□ 1.57
RBM4-207ENST00000506523 CCDC88BA6NC98 1476 aa24.77■■□□□ 1.56
RBM4-207ENST00000506523 TRIM41Q8WV44 630 aa24.71■■□□□ 1.55
RBM4-207ENST00000506523 OSCARQ8IYS5 282 aa24.65■■□□□ 1.54
RBM4-207ENST00000506523 IFT140Q96RY7 1462 aa24.62■■□□□ 1.53
RBM4-207ENST00000506523 TOPBP1Q92547 1522 aa24.61■■□□□ 1.53
RBM4-207ENST00000506523 ZNF608Q9ULD9 1512 aaPredicted RBP24.59■■□□□ 1.53
RBM4-207ENST00000506523 ABCC8Q09428 1581 aa24.54■■□□□ 1.52
RBM4-207ENST00000506523 DNMBPQ6XZF7 1577 aa24.53■■□□□ 1.52
RBM4-207ENST00000506523 EIF4G3O43432 1585 aaKnown RBP24.49■■□□□ 1.51
RBM4-207ENST00000506523 TARBP1Q13395 1621 aaKnown RBP24.43■■□□□ 1.5
RBM4-207ENST00000506523 RIMBP3CA6NJZ7 1639 aa24.43■■□□□ 1.5
RBM4-207ENST00000506523 RIMBP3BA6NNM3 1639 aa24.43■■□□□ 1.5
RBM4-207ENST00000506523 RIMBP3Q9UFD9 1639 aa24.43■■□□□ 1.5
RBM4-207ENST00000506523 POLA1P09884 1462 aaPredicted RBP24.36■■□□□ 1.49
RBM4-207ENST00000506523 ARHGEF11O15085 1522 aa24.34■■□□□ 1.49
RBM4-207ENST00000506523 AQRO60306 1485 aaKnown RBP eCLIP24.32■■□□□ 1.483e-7■■□□□ 13.9
RBM4-207ENST00000506523 CHD1O14646 1710 aa24.31■■□□□ 1.48
RBM4-207ENST00000506523 RAD54L2Q9Y4B4 1467 aa24.24■■□□□ 1.47
RBM4-207ENST00000506523 SOGA1O94964 1423 aa24.2■■□□□ 1.46
RBM4-207ENST00000506523 WDR97A6NE52 1622 aa24.2■■□□□ 1.46
RBM4-207ENST00000506523 FGD5Q6ZNL6 1462 aa24.19■■□□□ 1.46
RBM4-207ENST00000506523 CUX1P39880 1505 aa24.17■■□□□ 1.46
RBM4-207ENST00000506523 TDRD9Q8NDG6 1382 aaKnown RBP24.16■■□□□ 1.46
RBM4-207ENST00000506523 SNAPC4Q5SXM2 1469 aa24.11■■□□□ 1.45
RBM4-207ENST00000506523 FBLN2P98095 1184 aa24.1■■□□□ 1.45
RBM4-207ENST00000506523 ARAP1Q96P48 1450 aa24.1■■□□□ 1.45
RBM4-207ENST00000506523 CYB5RLQ6IPT4 315 aa24.07■■□□□ 1.44
RBM4-207ENST00000506523 MAGI1Q96QZ7 1491 aaPredicted RBP24.06■■□□□ 1.44
RBM4-207ENST00000506523 CLASP1Q7Z460 1538 aa24.05■■□□□ 1.44
RBM4-207ENST00000506523 GRIN2BQ13224 1484 aa24.03■■□□□ 1.44
RBM4-207ENST00000506523 SYNJ1O43426 1573 aa23.99■■□□□ 1.43
RBM4-207ENST00000506523 SYNJ2O15056 1496 aa23.97■■□□□ 1.43
RBM4-207ENST00000506523 PBRM1Q86U86 1689 aa23.97■■□□□ 1.43
RBM4-207ENST00000506523 CHMP7Q8WUX9 453 aaPredicted RBP23.94■■□□□ 1.42
RBM4-207ENST00000506523 ABCA5Q8WWZ7 1642 aa23.93■■□□□ 1.42
RBM4-207ENST00000506523 ABCA10Q8WWZ4 1543 aa23.93■■□□□ 1.42
RBM4-207ENST00000506523 GAPVD1Q14C86 1478 aa23.93■■□□□ 1.42
RBM4-207ENST00000506523 SUPT5HO00267 1087 aaKnown RBP23.86■■□□□ 1.41
RBM4-207ENST00000506523 BIVM-ERCC5R4GMW8 1640 aa23.8■■□□□ 1.4
RBM4-207ENST00000506523 TRHP20396 242 aaPredicted RBP23.79■■□□□ 1.4
RBM4-207ENST00000506523 TOP2BQ02880 1626 aa23.77■■□□□ 1.4
RBM4-207ENST00000506523 WRNQ14191 1432 aaPredicted RBP eCLIP23.77■■□□□ 1.4
RBM4-207ENST00000506523 ADAMTS12P58397 1594 aa23.74■■□□□ 1.39
RBM4-207ENST00000506523 GRIN2AQ12879 1464 aa23.74■■□□□ 1.39
RBM4-207ENST00000506523 NUP160Q12769 1436 aa23.67■■□□□ 1.38
RBM4-207ENST00000506523 CEP170Q5SW79 1584 aa23.67■■□□□ 1.38
RBM4-207ENST00000506523 ERCC6L2Q5T890 1561 aa23.65■■□□□ 1.38
RBM4-207ENST00000506523 FHAD1B1AJZ9 1412 aa23.63■■□□□ 1.37
RBM4-207ENST00000506523 ERICH3Q5RHP9 1530 aa23.63■■□□□ 1.37
RBM4-207ENST00000506523 SHROOM2Q13796 1616 aa23.61■■□□□ 1.37
RBM4-207ENST00000506523 RUSC2Q8N2Y8 1516 aa23.42■■□□□ 1.34
RBM4-207ENST00000506523 PRG4Q92954 1404 aaPredicted RBP23.4■■□□□ 1.34
RBM4-207ENST00000506523 JPH4Q96JJ6 628 aa23.35■■□□□ 1.33
RBM4-207ENST00000506523 KIF13AQ9H1H9 1805 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms