RNA–Protein interactions for RNA: ENST00000528950.1

AMBRA1-206, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5 BASIC

Gene AMBRA1, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-206ENST00000528950 NISCHQ9Y2I1 1504 aa16.16■□□□□ 0.18
AMBRA1-206ENST00000528950 SUPT5HO00267 1087 aaKnown RBP14.49□□□□□ -0.09
AMBRA1-206ENST00000528950 SHROOM4Q9ULL8 1493 aa14.41□□□□□ -0.1
AMBRA1-206ENST00000528950 HRCP23327 699 aa14.4□□□□□ -0.1
AMBRA1-206ENST00000528950 PCGF6Q9BYE7 350 aa14.4□□□□□ -0.1
AMBRA1-206ENST00000528950 PPARGC1BQ86YN6 1023 aaKnown RBP14.32□□□□□ -0.12
AMBRA1-206ENST00000528950 PELP1Q8IZL8 1130 aaKnown RBP14.17□□□□□ -0.14
AMBRA1-206ENST00000528950 CCDC180Q9P1Z9 1646 aa14.14□□□□□ -0.15
AMBRA1-206ENST00000528950 ABCC9O60706 1549 aa14.06□□□□□ -0.16
AMBRA1-206ENST00000528950 DCAF8L2P0C7V8 631 aa13.98□□□□□ -0.17
AMBRA1-206ENST00000528950 MYT1Q01538 1121 aa13.9□□□□□ -0.18
AMBRA1-206ENST00000528950 CHIC1Q5VXU3 224 aa13.84□□□□□ -0.19
AMBRA1-206ENST00000528950 LOC105371045A0A1W2PR82 267 aa13.77□□□□□ -0.21
AMBRA1-206ENST00000528950 SCAF1Q9H7N4 1312 aaKnown RBP13.76□□□□□ -0.21
AMBRA1-206ENST00000528950 MYO15BQ96JP2 1530 aa13.74□□□□□ -0.21
AMBRA1-206ENST00000528950 EHMT2Q96KQ7 1210 aa13.72□□□□□ -0.21
AMBRA1-206ENST00000528950 TRIM26Q12899 539 aaPredicted RBP13.68□□□□□ -0.22
AMBRA1-206ENST00000528950 ZEB1P37275 1124 aaPredicted RBP13.63□□□□□ -0.23
AMBRA1-206ENST00000528950 CENPBP07199 599 aaPredicted RBP13.62□□□□□ -0.23
AMBRA1-206ENST00000528950 FAM9AQ8IZU1 332 aaPredicted RBP13.53□□□□□ -0.24
AMBRA1-206ENST00000528950 GTF3C3Q9Y5Q9 886 aa13.45□□□□□ -0.26
AMBRA1-206ENST00000528950 ZCCHC6Q5VYS8 1495 aaKnown RBP13.44□□□□□ -0.26
AMBRA1-206ENST00000528950 RB1CC1Q8TDY2 1594 aa13.4□□□□□ -0.26
AMBRA1-206ENST00000528950 YTHDC1Q96MU7 727 aaKnown RBP13.4□□□□□ -0.26
AMBRA1-206ENST00000528950 ACIN1Q9UKV3 1341 aaKnown RBP13.4□□□□□ -0.26
AMBRA1-206ENST00000528950 CCER1Q8TC90 406 aaPredicted RBP13.39□□□□□ -0.27
AMBRA1-206ENST00000528950 NEUROD1Q13562 356 aa13.38□□□□□ -0.27
AMBRA1-206ENST00000528950 DCAF1Q9Y4B6 1507 aa13.38□□□□□ -0.27
AMBRA1-206ENST00000528950 TTBK1Q5TCY1 1321 aaPredicted RBP13.37□□□□□ -0.27
AMBRA1-206ENST00000528950 NACADO15069 1562 aa13.37□□□□□ -0.27
AMBRA1-206ENST00000528950 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.31□□□□□ -0.28
AMBRA1-206ENST00000528950 PABPN1Q86U42 306 aaKnown RBP eCLIP13.29□□□□□ -0.28
AMBRA1-206ENST00000528950 DIEXFQ68CQ4 756 aaKnown RBP13.26□□□□□ -0.29
AMBRA1-206ENST00000528950 TRIM41Q8WV44 630 aa13.26□□□□□ -0.29
AMBRA1-206ENST00000528950 ERICH6Q7L0X2 663 aa13.25□□□□□ -0.29
AMBRA1-206ENST00000528950 PRKCSHP14314 528 aaPredicted RBP13.2□□□□□ -0.3
AMBRA1-206ENST00000528950 SCRIBQ14160 1630 aa13.15□□□□□ -0.3
AMBRA1-206ENST00000528950 BCL11AQ9H165 835 aa13.06□□□□□ -0.32
AMBRA1-206ENST00000528950 APLP2Q06481 763 aa12.97□□□□□ -0.33
AMBRA1-206ENST00000528950 NEFLP07196 543 aa12.96□□□□□ -0.34
AMBRA1-206ENST00000528950 UNC13AQ9UPW8 1703 aa12.94□□□□□ -0.34
AMBRA1-206ENST00000528950 ZNF316A6NFI3 1004 aaPredicted RBP12.9□□□□□ -0.34
AMBRA1-206ENST00000528950 BICRAQ9NZM4 1560 aa12.9□□□□□ -0.34
AMBRA1-206ENST00000528950 MIER1Q8N108 512 aa12.85□□□□□ -0.35
AMBRA1-206ENST00000528950 HNRNPUL2Q1KMD3 747 aaKnown RBP12.82□□□□□ -0.36
AMBRA1-206ENST00000528950 BCANQ96GW7 911 aa12.78□□□□□ -0.36
AMBRA1-206ENST00000528950 DNAJC5BQ9UF47 199 aa12.77□□□□□ -0.37
AMBRA1-206ENST00000528950 UBTFP17480 764 aaKnown RBP12.73□□□□□ -0.37
AMBRA1-206ENST00000528950 RANGAP1P46060 587 aaPredicted RBP12.72□□□□□ -0.37
AMBRA1-206ENST00000528950 ANP32EQ9BTT0 268 aa12.69□□□□□ -0.38
AMBRA1-206ENST00000528950 CECR2Q9BXF3 1484 aa12.66□□□□□ -0.38
AMBRA1-206ENST00000528950 EIF4G1Q04637 1599 aaKnown RBP12.63□□□□□ -0.39
AMBRA1-206ENST00000528950 SUPT16HQ9Y5B9 1047 aaKnown RBP12.62□□□□□ -0.39
AMBRA1-206ENST00000528950 CSRNP3Q8WYN3 585 aa12.59□□□□□ -0.39
AMBRA1-206ENST00000528950 CC2D2AQ9P2K1 1620 aa12.56□□□□□ -0.4
AMBRA1-206ENST00000528950 TSHZ2Q9NRE2 1034 aa12.56□□□□□ -0.4
AMBRA1-206ENST00000528950 RTL5Q5HYW3 569 aaPredicted RBP12.55□□□□□ -0.4
AMBRA1-206ENST00000528950 BAZ1AQ9NRL2 1556 aaPredicted RBP12.52□□□□□ -0.4
AMBRA1-206ENST00000528950 FKBP8Q14318 412 aa12.52□□□□□ -0.41
AMBRA1-206ENST00000528950 MROH2BQ7Z745 1585 aa12.5□□□□□ -0.41
AMBRA1-206ENST00000528950 SMARCA4P51532 1647 aa12.48□□□□□ -0.41
AMBRA1-206ENST00000528950 RSF1Q96T23 1441 aaPredicted RBP12.48□□□□□ -0.41
AMBRA1-206ENST00000528950 ITGAEP38570 1179 aa12.47□□□□□ -0.41
AMBRA1-206ENST00000528950 CLSPNQ9HAW4 1339 aa12.46□□□□□ -0.42
AMBRA1-206ENST00000528950 ATAD2BQ9ULI0 1458 aa12.44□□□□□ -0.42
AMBRA1-206ENST00000528950 DAXXQ9UER7 740 aaPredicted RBP12.43□□□□□ -0.42
AMBRA1-206ENST00000528950 BAZ1BQ9UIG0 1483 aaKnown RBP12.41□□□□□ -0.42
AMBRA1-206ENST00000528950 SMARCA2P51531 1590 aa12.41□□□□□ -0.42
AMBRA1-206ENST00000528950 CEP162Q5TB80 1403 aa12.38□□□□□ -0.43
AMBRA1-206ENST00000528950 NCAPD3P42695 1498 aa12.37□□□□□ -0.43
AMBRA1-206ENST00000528950 CDK11AQ9UQ88 783 aaPredicted RBP12.37□□□□□ -0.43
AMBRA1-206ENST00000528950 WIZO95785 1651 aa12.35□□□□□ -0.43
AMBRA1-206ENST00000528950 RBM19Q9Y4C8 960 aaKnown RBP12.34□□□□□ -0.43
AMBRA1-206ENST00000528950 TRIM52Q96A61 297 aa12.34□□□□□ -0.43
AMBRA1-206ENST00000528950 EIF5BO60841 1220 aaKnown RBP12.33□□□□□ -0.44
AMBRA1-206ENST00000528950 ATP1B4Q9UN42 357 aaPredicted RBP12.33□□□□□ -0.44
AMBRA1-206ENST00000528950 KCNH8Q96L42 1107 aa12.32□□□□□ -0.44
AMBRA1-206ENST00000528950 DDX10Q13206 875 aaKnown RBP12.29□□□□□ -0.44
AMBRA1-206ENST00000528950 IRX6P78412 446 aaPredicted RBP12.28□□□□□ -0.44
AMBRA1-206ENST00000528950 HMGXB3Q12766 1538 aa12.26□□□□□ -0.45
AMBRA1-206ENST00000528950 CNGB1Q14028 1251 aaPredicted RBP12.25□□□□□ -0.45
AMBRA1-206ENST00000528950 PEG3Q9GZU2 1588 aa12.23□□□□□ -0.45
AMBRA1-206ENST00000528950 HIRIP3Q9BW71 556 aaPredicted RBP12.23□□□□□ -0.45
AMBRA1-206ENST00000528950 NBR1Q14596 966 aa12.23□□□□□ -0.45
AMBRA1-206ENST00000528950 ANO8Q9HCE9 1232 aaPredicted RBP12.22□□□□□ -0.45
AMBRA1-206ENST00000528950 TNIKQ9UKE5 1360 aa12.19□□□□□ -0.46
AMBRA1-206ENST00000528950 MYT1LQ9UL68 1186 aa12.19□□□□□ -0.46
AMBRA1-206ENST00000528950 TOP2AP11388 1531 aaKnown RBP12.19□□□□□ -0.46
AMBRA1-206ENST00000528950 ANP32CO43423 234 aa12.18□□□□□ -0.46
AMBRA1-206ENST00000528950 SOGA1O94964 1423 aa12.18□□□□□ -0.46
AMBRA1-206ENST00000528950 POLR3GLQ9BT43 218 aa12.18□□□□□ -0.46
AMBRA1-206ENST00000528950 WRNQ14191 1432 aaPredicted RBP eCLIP12.17□□□□□ -0.46
AMBRA1-206ENST00000528950 MSH5O43196 834 aa12.16□□□□□ -0.46
AMBRA1-206ENST00000528950 ERCC6Q03468 1493 aa12.15□□□□□ -0.46
AMBRA1-206ENST00000528950 NESP48681 1621 aa12.15□□□□□ -0.47
AMBRA1-206ENST00000528950 DEKP35659 375 aaKnown RBP12.14□□□□□ -0.47
AMBRA1-206ENST00000528950 CCDC88BA6NC98 1476 aa12.13□□□□□ -0.47
AMBRA1-206ENST00000528950 ANP32AP39687 249 aaKnown RBP12.13□□□□□ -0.47
AMBRA1-206ENST00000528950 ABCC8Q09428 1581 aa12.12□□□□□ -0.47
AMBRA1-206ENST00000528950 HNRNPUQ00839 825 aaKnown RBP eCLIP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms