RNA–Protein interactions for RNA: ENST00000227378.7

HSPA8-201, Transcript of heat shock protein family A (Hsp70) member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPA8, Length 2,186 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPA8-201ENST00000227378 NISCHQ9Y2I1 1504 aa26.66■■□□□ 1.86
HSPA8-201ENST00000227378 CCDC180Q9P1Z9 1646 aa23.25■■□□□ 1.31
HSPA8-201ENST00000227378 ZCCHC6Q5VYS8 1495 aaKnown RBP22.35■■□□□ 1.17
HSPA8-201ENST00000227378 ABCC9O60706 1549 aa22.18■■□□□ 1.14
HSPA8-201ENST00000227378 DCAF8L2P0C7V8 631 aa22.18■■□□□ 1.14
HSPA8-201ENST00000227378 SHROOM4Q9ULL8 1493 aa22.06■■□□□ 1.12
HSPA8-201ENST00000227378 DCAF1Q9Y4B6 1507 aa22.01■■□□□ 1.11
HSPA8-201ENST00000227378 MYO15BQ96JP2 1530 aa21.79■■□□□ 1.08
HSPA8-201ENST00000227378 NACADO15069 1562 aa21.72■■□□□ 1.07
HSPA8-201ENST00000227378 RB1CC1Q8TDY2 1594 aa21.56■■□□□ 1.04
HSPA8-201ENST00000227378 SCRIBQ14160 1630 aa21.42■■□□□ 1.02
HSPA8-201ENST00000227378 SUPT5HO00267 1087 aaKnown RBP21.36■■□□□ 1.01
HSPA8-201ENST00000227378 UNC13AQ9UPW8 1703 aa21.11■□□□□ 0.97
HSPA8-201ENST00000227378 PABPN1Q86U42 306 aaKnown RBP eCLIP20.94■□□□□ 0.94
HSPA8-201ENST00000227378 BICRAQ9NZM4 1560 aa20.92■□□□□ 0.94
HSPA8-201ENST00000227378 CECR2Q9BXF3 1484 aa20.76■□□□□ 0.91
HSPA8-201ENST00000227378 RSF1Q96T23 1441 aaPredicted RBP20.71■□□□□ 0.91
HSPA8-201ENST00000227378 MROH2BQ7Z745 1585 aa20.6■□□□□ 0.89
HSPA8-201ENST00000227378 BAZ1AQ9NRL2 1556 aaPredicted RBP20.58■□□□□ 0.89
HSPA8-201ENST00000227378 SMARCA4P51532 1647 aa20.5■□□□□ 0.87
HSPA8-201ENST00000227378 CHIC1Q5VXU3 224 aa20.5■□□□□ 0.87
HSPA8-201ENST00000227378 WIZO95785 1651 aa20.43■□□□□ 0.86
HSPA8-201ENST00000227378 EIF4G1Q04637 1599 aaKnown RBP20.31■□□□□ 0.84
HSPA8-201ENST00000227378 PEG3Q9GZU2 1588 aa20.24■□□□□ 0.83
HSPA8-201ENST00000227378 ATAD2BQ9ULI0 1458 aa20.22■□□□□ 0.83
HSPA8-201ENST00000227378 TOP2AP11388 1531 aaKnown RBP20.18■□□□□ 0.82
HSPA8-201ENST00000227378 SMARCA2P51531 1590 aa20.18■□□□□ 0.82
HSPA8-201ENST00000227378 BAZ1BQ9UIG0 1483 aaKnown RBP20.1■□□□□ 0.81
HSPA8-201ENST00000227378 NCAPD3P42695 1498 aa20.06■□□□□ 0.8
HSPA8-201ENST00000227378 CC2D2AQ9P2K1 1620 aa20.04■□□□□ 0.8
HSPA8-201ENST00000227378 CCDC88BA6NC98 1476 aa20.02■□□□□ 0.79
HSPA8-201ENST00000227378 HMGXB3Q12766 1538 aa19.99■□□□□ 0.79
HSPA8-201ENST00000227378 TRIM41Q8WV44 630 aa19.99■□□□□ 0.79
HSPA8-201ENST00000227378 LOC105371045A0A1W2PR82 267 aa19.82■□□□□ 0.76
HSPA8-201ENST00000227378 FAM9AQ8IZU1 332 aaPredicted RBP19.74■□□□□ 0.75
HSPA8-201ENST00000227378 DNAJC5BQ9UF47 199 aa19.72■□□□□ 0.75
HSPA8-201ENST00000227378 ABCC8Q09428 1581 aa19.71■□□□□ 0.75
HSPA8-201ENST00000227378 CFTRP13569 1480 aa19.58■□□□□ 0.73
HSPA8-201ENST00000227378 CADPSQ9ULU8 1353 aa19.56■□□□□ 0.72
HSPA8-201ENST00000227378 EHMT2Q96KQ7 1210 aa19.54■□□□□ 0.72
HSPA8-201ENST00000227378 WRNQ14191 1432 aaPredicted RBP eCLIP19.5■□□□□ 0.71
HSPA8-201ENST00000227378 NESP48681 1621 aa19.43■□□□□ 0.7
HSPA8-201ENST00000227378 PRDM2Q13029 1718 aa19.42■□□□□ 0.7
HSPA8-201ENST00000227378 SYNJ1O43426 1573 aa19.41■□□□□ 0.7
HSPA8-201ENST00000227378 SOGA1O94964 1423 aa19.4■□□□□ 0.7
HSPA8-201ENST00000227378 LAMC3Q9Y6N6 1575 aa19.39■□□□□ 0.69
HSPA8-201ENST00000227378 FANCD2Q9BXW9 1451 aa19.34■□□□□ 0.69
HSPA8-201ENST00000227378 RUSC2Q8N2Y8 1516 aa19.32■□□□□ 0.68
HSPA8-201ENST00000227378 EEA1Q15075 1411 aa19.29■□□□□ 0.68
HSPA8-201ENST00000227378 TOP2BQ02880 1626 aa19.27■□□□□ 0.67
HSPA8-201ENST00000227378 PDS5BQ9NTI5 1447 aa19.26■□□□□ 0.67
HSPA8-201ENST00000227378 CSRNP3Q8WYN3 585 aa19.26■□□□□ 0.67
HSPA8-201ENST00000227378 CUX1P39880 1505 aa19.26■□□□□ 0.67
HSPA8-201ENST00000227378 BIVM-ERCC5R4GMW8 1640 aa19.24■□□□□ 0.67
HSPA8-201ENST00000227378 PCGF6Q9BYE7 350 aa19.23■□□□□ 0.67
HSPA8-201ENST00000227378 CEP164Q9UPV0 1460 aa19.21■□□□□ 0.67
HSPA8-201ENST00000227378 KIF21AQ7Z4S6 1674 aa19.16■□□□□ 0.66
HSPA8-201ENST00000227378 UBTFP17480 764 aaKnown RBP19.13■□□□□ 0.65
HSPA8-201ENST00000227378 DNMBPQ6XZF7 1577 aa19.11■□□□□ 0.65
HSPA8-201ENST00000227378 GOLGA3Q08378 1498 aa19.11■□□□□ 0.65
HSPA8-201ENST00000227378 TOPBP1Q92547 1522 aa19.1■□□□□ 0.65
HSPA8-201ENST00000227378 URB2Q14146 1524 aaKnown RBP19.09■□□□□ 0.65
HSPA8-201ENST00000227378 TNIKQ9UKE5 1360 aa19.09■□□□□ 0.65
HSPA8-201ENST00000227378 FGD5Q6ZNL6 1462 aa19.08■□□□□ 0.64
HSPA8-201ENST00000227378 CEP162Q5TB80 1403 aa19.06■□□□□ 0.64
HSPA8-201ENST00000227378 TRIM26Q12899 539 aaPredicted RBP19.06■□□□□ 0.64
HSPA8-201ENST00000227378 KIF21BO75037 1637 aa19.05■□□□□ 0.64
HSPA8-201ENST00000227378 ERCC6Q03468 1493 aa19.03■□□□□ 0.64
HSPA8-201ENST00000227378 MRC2Q9UBG0 1479 aa19.01■□□□□ 0.63
HSPA8-201ENST00000227378 POLA1P09884 1462 aaPredicted RBP19■□□□□ 0.63
HSPA8-201ENST00000227378 RAPGEF2Q9Y4G8 1499 aa18.98■□□□□ 0.63
HSPA8-201ENST00000227378 RAD54L2Q9Y4B4 1467 aa18.97■□□□□ 0.63
HSPA8-201ENST00000227378 KIF27Q86VH2 1401 aa18.97■□□□□ 0.63
HSPA8-201ENST00000227378 PPARGC1BQ86YN6 1023 aaKnown RBP18.95■□□□□ 0.62
HSPA8-201ENST00000227378 CUX2O14529 1486 aa18.94■□□□□ 0.62
HSPA8-201ENST00000227378 WDR62O43379 1518 aa18.9■□□□□ 0.62
HSPA8-201ENST00000227378 ABCA10Q8WWZ4 1543 aa18.9■□□□□ 0.62
HSPA8-201ENST00000227378 PRXQ9BXM0 1461 aa18.89■□□□□ 0.61
HSPA8-201ENST00000227378 THOC2Q8NI27 1593 aaKnown RBP18.86■□□□□ 0.61
HSPA8-201ENST00000227378 ERICH3Q5RHP9 1530 aa18.85■□□□□ 0.61
HSPA8-201ENST00000227378 RANGAP1P46060 587 aaPredicted RBP18.85■□□□□ 0.61
HSPA8-201ENST00000227378 CLIP1P30622 1438 aa18.85■□□□□ 0.61
HSPA8-201ENST00000227378 HRCP23327 699 aa18.83■□□□□ 0.6
HSPA8-201ENST00000227378 IGF1RP08069 1367 aa18.82■□□□□ 0.6
HSPA8-201ENST00000227378 TDRD9Q8NDG6 1382 aaKnown RBP18.81■□□□□ 0.6
HSPA8-201ENST00000227378 WDR97A6NE52 1622 aa18.81■□□□□ 0.6
HSPA8-201ENST00000227378 TARBP1Q13395 1621 aaKnown RBP18.81■□□□□ 0.6
HSPA8-201ENST00000227378 TTBK1Q5TCY1 1321 aaPredicted RBP18.77■□□□□ 0.59
HSPA8-201ENST00000227378 IFT140Q96RY7 1462 aa18.76■□□□□ 0.59
HSPA8-201ENST00000227378 GAPVD1Q14C86 1478 aa18.74■□□□□ 0.59
HSPA8-201ENST00000227378 ABCA5Q8WWZ7 1642 aa18.73■□□□□ 0.59
HSPA8-201ENST00000227378 CARMIL1Q5VZK9 1371 aa18.73■□□□□ 0.59
HSPA8-201ENST00000227378 AQRO60306 1485 aaKnown RBP eCLIP18.7■□□□□ 0.588e-8■■■■□ 22.5
HSPA8-201ENST00000227378 VPS8Q8N3P4 1428 aa18.69■□□□□ 0.58
HSPA8-201ENST00000227378 ZNF608Q9ULD9 1512 aaPredicted RBP18.69■□□□□ 0.58
HSPA8-201ENST00000227378 CUL7Q14999 1698 aa18.63■□□□□ 0.57
HSPA8-201ENST00000227378 ARAP1Q96P48 1450 aa18.61■□□□□ 0.57
HSPA8-201ENST00000227378 PBRM1Q86U86 1689 aa18.6■□□□□ 0.57
HSPA8-201ENST00000227378 GRIN2BQ13224 1484 aa18.6■□□□□ 0.57
HSPA8-201ENST00000227378 APLP2Q06481 763 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms