RNA–Protein interactions for RNA: ENST00000456170.5

ERI3-204, Transcript of ERI1 exoribonuclease family member 3, humanhuman

TSL 5

Gene ERI3, Length 1,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERI3-204ENST00000456170 NISCHQ9Y2I1 1504 aa32.26■■■□□ 2.76
ERI3-204ENST00000456170 CCDC180Q9P1Z9 1646 aa28.64■■■□□ 2.18
ERI3-204ENST00000456170 ABCC9O60706 1549 aa28.46■■■□□ 2.15
ERI3-204ENST00000456170 DCAF8L2P0C7V8 631 aa27.17■■□□□ 1.94
ERI3-204ENST00000456170 RB1CC1Q8TDY2 1594 aa27.14■■□□□ 1.93
ERI3-204ENST00000456170 NACADO15069 1562 aa27.05■■□□□ 1.92
ERI3-204ENST00000456170 ZCCHC6Q5VYS8 1495 aaKnown RBP26.81■■□□□ 1.88
ERI3-204ENST00000456170 MYO15BQ96JP2 1530 aa26.81■■□□□ 1.88
ERI3-204ENST00000456170 PABPN1Q86U42 306 aaKnown RBP eCLIP26.65■■□□□ 1.86
ERI3-204ENST00000456170 DCAF1Q9Y4B6 1507 aa26.63■■□□□ 1.85
ERI3-204ENST00000456170 DNAJC5BQ9UF47 199 aa26.5■■□□□ 1.83
ERI3-204ENST00000456170 UNC13AQ9UPW8 1703 aa26.47■■□□□ 1.83
ERI3-204ENST00000456170 BICRAQ9NZM4 1560 aa26.42■■□□□ 1.82
ERI3-204ENST00000456170 SCRIBQ14160 1630 aa26.24■■□□□ 1.79
ERI3-204ENST00000456170 SHROOM4Q9ULL8 1493 aa25.98■■□□□ 1.75
ERI3-204ENST00000456170 EIF4G1Q04637 1599 aaKnown RBP25.7■■□□□ 1.71
ERI3-204ENST00000456170 CC2D2AQ9P2K1 1620 aa25.66■■□□□ 1.7
ERI3-204ENST00000456170 CECR2Q9BXF3 1484 aa25.57■■□□□ 1.68
ERI3-204ENST00000456170 NCAPD3P42695 1498 aa25.06■■□□□ 1.6
ERI3-204ENST00000456170 ATAD2BQ9ULI0 1458 aa25.05■■□□□ 1.6
ERI3-204ENST00000456170 SMARCA4P51532 1647 aa25.04■■□□□ 1.6
ERI3-204ENST00000456170 BAZ1AQ9NRL2 1556 aaPredicted RBP24.97■■□□□ 1.59
ERI3-204ENST00000456170 MROH2BQ7Z745 1585 aa24.91■■□□□ 1.58
ERI3-204ENST00000456170 SMARCA2P51531 1590 aa24.9■■□□□ 1.58
ERI3-204ENST00000456170 HMGXB3Q12766 1538 aa24.82■■□□□ 1.56
ERI3-204ENST00000456170 PEG3Q9GZU2 1588 aa24.79■■□□□ 1.56
ERI3-204ENST00000456170 BAZ1BQ9UIG0 1483 aaKnown RBP24.77■■□□□ 1.56
ERI3-204ENST00000456170 NESP48681 1621 aa24.58■■□□□ 1.53
ERI3-204ENST00000456170 WIZO95785 1651 aa24.57■■□□□ 1.52
ERI3-204ENST00000456170 RSF1Q96T23 1441 aaPredicted RBP24.56■■□□□ 1.52
ERI3-204ENST00000456170 ERCC6Q03468 1493 aa24.47■■□□□ 1.51
ERI3-204ENST00000456170 LAMC3Q9Y6N6 1575 aa24.33■■□□□ 1.49
ERI3-204ENST00000456170 CADPSQ9ULU8 1353 aa24.33■■□□□ 1.49
ERI3-204ENST00000456170 CUX2O14529 1486 aa24.28■■□□□ 1.48
ERI3-204ENST00000456170 TOP2AP11388 1531 aaKnown RBP24.27■■□□□ 1.48
ERI3-204ENST00000456170 PDS5BQ9NTI5 1447 aa24.24■■□□□ 1.47
ERI3-204ENST00000456170 THOC2Q8NI27 1593 aaKnown RBP24.15■■□□□ 1.46
ERI3-204ENST00000456170 KIF21AQ7Z4S6 1674 aa24.13■■□□□ 1.45
ERI3-204ENST00000456170 CFTRP13569 1480 aa24.12■■□□□ 1.45
ERI3-204ENST00000456170 CCDC88BA6NC98 1476 aa24.07■■□□□ 1.44
ERI3-204ENST00000456170 FANCD2Q9BXW9 1451 aa24.02■■□□□ 1.44
ERI3-204ENST00000456170 MRC2Q9UBG0 1479 aa24.01■■□□□ 1.43
ERI3-204ENST00000456170 CEP164Q9UPV0 1460 aa23.97■■□□□ 1.43
ERI3-204ENST00000456170 DNAJC5Q9H3Z4 198 aa23.96■■□□□ 1.43
ERI3-204ENST00000456170 WDR62O43379 1518 aa23.92■■□□□ 1.42
ERI3-204ENST00000456170 URB2Q14146 1524 aaKnown RBP23.83■■□□□ 1.41
ERI3-204ENST00000456170 SUPT5HO00267 1087 aaKnown RBP23.79■■□□□ 1.4
ERI3-204ENST00000456170 PRDM2Q13029 1718 aa23.67■■□□□ 1.38
ERI3-204ENST00000456170 TOPBP1Q92547 1522 aa23.61■■□□□ 1.37
ERI3-204ENST00000456170 ABCC8Q09428 1581 aa23.51■■□□□ 1.35
ERI3-204ENST00000456170 DNMBPQ6XZF7 1577 aa23.51■■□□□ 1.35
ERI3-204ENST00000456170 ZNF608Q9ULD9 1512 aaPredicted RBP23.5■■□□□ 1.35
ERI3-204ENST00000456170 IFT140Q96RY7 1462 aa23.49■■□□□ 1.35
ERI3-204ENST00000456170 POLA1P09884 1462 aaPredicted RBP23.4■■□□□ 1.34
ERI3-204ENST00000456170 CUX1P39880 1505 aa23.37■■□□□ 1.33
ERI3-204ENST00000456170 RAD54L2Q9Y4B4 1467 aa23.36■■□□□ 1.33
ERI3-204ENST00000456170 TARBP1Q13395 1621 aaKnown RBP23.34■■□□□ 1.33
ERI3-204ENST00000456170 AQRO60306 1485 aaKnown RBP eCLIP23.34■■□□□ 1.332e-6■■■■□ 26.4
ERI3-204ENST00000456170 OSCARQ8IYS5 282 aa23.33■■□□□ 1.33
ERI3-204ENST00000456170 SOGA1O94964 1423 aa23.33■■□□□ 1.32
ERI3-204ENST00000456170 FGD5Q6ZNL6 1462 aa23.3■■□□□ 1.32
ERI3-204ENST00000456170 TDRD9Q8NDG6 1382 aaKnown RBP23.27■■□□□ 1.32
ERI3-204ENST00000456170 EIF4G3O43432 1585 aaKnown RBP23.27■■□□□ 1.32
ERI3-204ENST00000456170 WRNQ14191 1432 aaPredicted RBP eCLIP23.11■■□□□ 1.29
ERI3-204ENST00000456170 FBLN2P98095 1184 aa23.1■■□□□ 1.29
ERI3-204ENST00000456170 TRIM41Q8WV44 630 aa23.07■■□□□ 1.28
ERI3-204ENST00000456170 SYNJ1O43426 1573 aa23.06■■□□□ 1.28
ERI3-204ENST00000456170 SNAPC4Q5SXM2 1469 aa23.06■■□□□ 1.28
ERI3-204ENST00000456170 ABCA10Q8WWZ4 1543 aa23.05■■□□□ 1.28
ERI3-204ENST00000456170 GRIN2BQ13224 1484 aa23.04■■□□□ 1.28
ERI3-204ENST00000456170 WDR97A6NE52 1622 aa23.03■■□□□ 1.28
ERI3-204ENST00000456170 TOP2BQ02880 1626 aa23.03■■□□□ 1.28
ERI3-204ENST00000456170 GAPVD1Q14C86 1478 aa23.02■■□□□ 1.28
ERI3-204ENST00000456170 BIVM-ERCC5R4GMW8 1640 aa22.99■■□□□ 1.27
ERI3-204ENST00000456170 CHD1O14646 1710 aa22.98■■□□□ 1.27
ERI3-204ENST00000456170 CHMP7Q8WUX9 453 aaPredicted RBP22.97■■□□□ 1.27
ERI3-204ENST00000456170 MAGI1Q96QZ7 1491 aaPredicted RBP22.96■■□□□ 1.27
ERI3-204ENST00000456170 ABCA5Q8WWZ7 1642 aa22.93■■□□□ 1.26
ERI3-204ENST00000456170 SYNJ2O15056 1496 aa22.91■■□□□ 1.26
ERI3-204ENST00000456170 RIMBP3CA6NJZ7 1639 aa22.9■■□□□ 1.26
ERI3-204ENST00000456170 RIMBP3BA6NNM3 1639 aa22.9■■□□□ 1.26
ERI3-204ENST00000456170 RIMBP3Q9UFD9 1639 aa22.9■■□□□ 1.26
ERI3-204ENST00000456170 ARHGEF11O15085 1522 aa22.9■■□□□ 1.26
ERI3-204ENST00000456170 PBRM1Q86U86 1689 aa22.86■■□□□ 1.25
ERI3-204ENST00000456170 CLASP1Q7Z460 1538 aa22.82■■□□□ 1.24
ERI3-204ENST00000456170 CYB5RLQ6IPT4 315 aa22.79■■□□□ 1.24
ERI3-204ENST00000456170 ADAMTS12P58397 1594 aa22.75■■□□□ 1.23
ERI3-204ENST00000456170 GRIN2AQ12879 1464 aa22.74■■□□□ 1.23
ERI3-204ENST00000456170 FHAD1B1AJZ9 1412 aa22.74■■□□□ 1.23
ERI3-204ENST00000456170 ARAP1Q96P48 1450 aa22.73■■□□□ 1.23
ERI3-204ENST00000456170 ERICH3Q5RHP9 1530 aa22.73■■□□□ 1.23
ERI3-204ENST00000456170 NUP160Q12769 1436 aa22.67■■□□□ 1.22
ERI3-204ENST00000456170 IGF1RP08069 1367 aa22.66■■□□□ 1.22
ERI3-204ENST00000456170 CEP170Q5SW79 1584 aa22.64■■□□□ 1.22
ERI3-204ENST00000456170 KIF27Q86VH2 1401 aa22.62■■□□□ 1.21
ERI3-204ENST00000456170 ERCC6L2Q5T890 1561 aa22.55■■□□□ 1.2
ERI3-204ENST00000456170 JPH4Q96JJ6 628 aa22.49■■□□□ 1.19
ERI3-204ENST00000456170 CARMIL1Q5VZK9 1371 aa22.48■■□□□ 1.19
ERI3-204ENST00000456170 RUSC2Q8N2Y8 1516 aa22.47■■□□□ 1.19
ERI3-204ENST00000456170 SHROOM2Q13796 1616 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms