RNA–Protein interactions for RNA: ENST00000531407.5

CFL1-211, Transcript of cofilin 1, humanhuman

TSL 2 BASIC

Gene CFL1, Length 1,062 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Lamellipodium, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFL1-211ENST00000531407 NISCHQ9Y2I1 1504 aa49.65■■■■■ 5.54
CFL1-211ENST00000531407 CCDC180Q9P1Z9 1646 aa44.32■■■■■ 4.69
CFL1-211ENST00000531407 ABCC9O60706 1549 aa44.14■■■■■ 4.66
CFL1-211ENST00000531407 RB1CC1Q8TDY2 1594 aa41.96■■■■■ 4.31
CFL1-211ENST00000531407 NACADO15069 1562 aa41.82■■■■■ 4.29
CFL1-211ENST00000531407 DNAJC5BQ9UF47 199 aa41.78■■■■■ 4.28
CFL1-211ENST00000531407 DCAF8L2P0C7V8 631 aa41.64■■■■■ 4.26
CFL1-211ENST00000531407 MYO15BQ96JP2 1530 aa41.48■■■■■ 4.23
CFL1-211ENST00000531407 ZCCHC6Q5VYS8 1495 aaKnown RBP41.28■■■■■ 4.2
CFL1-211ENST00000531407 PABPN1Q86U42 306 aaKnown RBP eCLIP41.18■■■■■ 4.18
CFL1-211ENST00000531407 DCAF1Q9Y4B6 1507 aa41.12■■■■■ 4.17
CFL1-211ENST00000531407 UNC13AQ9UPW8 1703 aa40.82■■■■■ 4.13
CFL1-211ENST00000531407 BICRAQ9NZM4 1560 aa40.67■■■■■ 4.1
CFL1-211ENST00000531407 SCRIBQ14160 1630 aa40.35■■■■■ 4.05
CFL1-211ENST00000531407 SHROOM4Q9ULL8 1493 aa40.33■■■■■ 4.05
CFL1-211ENST00000531407 CECR2Q9BXF3 1484 aa39.85■■■■□ 3.97
CFL1-211ENST00000531407 CC2D2AQ9P2K1 1620 aa39.82■■■■□ 3.96
CFL1-211ENST00000531407 EIF4G1Q04637 1599 aaKnown RBP39.71■■■■□ 3.95
CFL1-211ENST00000531407 DNAJC5Q9H3Z4 198 aa38.62■■■■□ 3.77
CFL1-211ENST00000531407 NCAPD3P42695 1498 aa38.6■■■■□ 3.77
CFL1-211ENST00000531407 SMARCA4P51532 1647 aa38.59■■■■□ 3.77
CFL1-211ENST00000531407 BAZ1AQ9NRL2 1556 aaPredicted RBP38.54■■■■□ 3.76
CFL1-211ENST00000531407 ATAD2BQ9ULI0 1458 aa38.53■■■■□ 3.76
CFL1-211ENST00000531407 SMARCA2P51531 1590 aa38.48■■■■□ 3.75
CFL1-211ENST00000531407 HMGXB3Q12766 1538 aa38.37■■■■□ 3.73
CFL1-211ENST00000531407 PEG3Q9GZU2 1588 aa38.27■■■■□ 3.72
CFL1-211ENST00000531407 CUX2O14529 1486 aa38.22■■■■□ 3.71
CFL1-211ENST00000531407 MROH2BQ7Z745 1585 aa38.21■■■■□ 3.71
CFL1-211ENST00000531407 BAZ1BQ9UIG0 1483 aaKnown RBP38.21■■■■□ 3.71
CFL1-211ENST00000531407 ERCC6Q03468 1493 aa38.15■■■■□ 3.7
CFL1-211ENST00000531407 NESP48681 1621 aa37.83■■■■□ 3.65
CFL1-211ENST00000531407 WIZO95785 1651 aa37.73■■■■□ 3.63
CFL1-211ENST00000531407 RSF1Q96T23 1441 aaPredicted RBP37.66■■■■□ 3.62
CFL1-211ENST00000531407 LAMC3Q9Y6N6 1575 aa37.63■■■■□ 3.62
CFL1-211ENST00000531407 PDS5BQ9NTI5 1447 aa37.5■■■■□ 3.59
CFL1-211ENST00000531407 CADPSQ9ULU8 1353 aa37.45■■■■□ 3.59
CFL1-211ENST00000531407 THOC2Q8NI27 1593 aaKnown RBP37.41■■■■□ 3.58
CFL1-211ENST00000531407 TOP2AP11388 1531 aaKnown RBP37.4■■■■□ 3.58
CFL1-211ENST00000531407 KIF21AQ7Z4S6 1674 aa37.21■■■■□ 3.55
CFL1-211ENST00000531407 CFTRP13569 1480 aa37.13■■■■□ 3.54
CFL1-211ENST00000531407 MRC2Q9UBG0 1479 aa37.07■■■■□ 3.53
CFL1-211ENST00000531407 CEP164Q9UPV0 1460 aa37.01■■■■□ 3.52
CFL1-211ENST00000531407 FANCD2Q9BXW9 1451 aa37.01■■■■□ 3.51
CFL1-211ENST00000531407 WDR62O43379 1518 aa36.95■■■■□ 3.51
CFL1-211ENST00000531407 CCDC88BA6NC98 1476 aa36.94■■■■□ 3.5
CFL1-211ENST00000531407 PRDM2Q13029 1718 aa36.69■■■■□ 3.46
CFL1-211ENST00000531407 TRIM41Q8WV44 630 aa36.68■■■■□ 3.46
CFL1-211ENST00000531407 URB2Q14146 1524 aaKnown RBP36.63■■■■□ 3.45
CFL1-211ENST00000531407 OSCARQ8IYS5 282 aa36.6■■■■□ 3.45
CFL1-211ENST00000531407 ABCC8Q09428 1581 aa36.4■■■■□ 3.42
CFL1-211ENST00000531407 SUPT5HO00267 1087 aaKnown RBP36.35■■■■□ 3.41
CFL1-211ENST00000531407 TOPBP1Q92547 1522 aa36.34■■■■□ 3.41
CFL1-211ENST00000531407 IFT140Q96RY7 1462 aa36.27■■■■□ 3.4
CFL1-211ENST00000531407 DNMBPQ6XZF7 1577 aa36.27■■■■□ 3.4
CFL1-211ENST00000531407 ZNF608Q9ULD9 1512 aaPredicted RBP36.09■■■■□ 3.37
CFL1-211ENST00000531407 POLA1P09884 1462 aaPredicted RBP36.01■■■■□ 3.36
CFL1-211ENST00000531407 TARBP1Q13395 1621 aaKnown RBP35.95■■■■□ 3.35
CFL1-211ENST00000531407 EIF4G3O43432 1585 aaKnown RBP35.91■■■■□ 3.34
CFL1-211ENST00000531407 CUX1P39880 1505 aa35.88■■■■□ 3.33
CFL1-211ENST00000531407 SOGA1O94964 1423 aa35.88■■■■□ 3.33
CFL1-211ENST00000531407 FGD5Q6ZNL6 1462 aa35.86■■■■□ 3.33
CFL1-211ENST00000531407 RIMBP3CA6NJZ7 1639 aa35.83■■■■□ 3.33
CFL1-211ENST00000531407 RIMBP3BA6NNM3 1639 aa35.83■■■■□ 3.33
CFL1-211ENST00000531407 RIMBP3Q9UFD9 1639 aa35.83■■■■□ 3.33
CFL1-211ENST00000531407 AQRO60306 1485 aaKnown RBP eCLIP35.82■■■■□ 3.327e-13■■■□□ 15.6
CFL1-211ENST00000531407 RAD54L2Q9Y4B4 1467 aa35.82■■■■□ 3.32
CFL1-211ENST00000531407 ARHGEF11O15085 1522 aa35.78■■■■□ 3.32
CFL1-211ENST00000531407 WDR97A6NE52 1622 aa35.73■■■■□ 3.31
CFL1-211ENST00000531407 TDRD9Q8NDG6 1382 aaKnown RBP35.71■■■■□ 3.31
CFL1-211ENST00000531407 CYB5RLQ6IPT4 315 aa35.69■■■■□ 3.3
CFL1-211ENST00000531407 FBLN2P98095 1184 aa35.67■■■■□ 3.3
CFL1-211ENST00000531407 WRNQ14191 1432 aaPredicted RBP eCLIP35.55■■■■□ 3.28
CFL1-211ENST00000531407 GRIN2BQ13224 1484 aa35.53■■■■□ 3.28
CFL1-211ENST00000531407 ABCA10Q8WWZ4 1543 aa35.52■■■■□ 3.28
CFL1-211ENST00000531407 SNAPC4Q5SXM2 1469 aa35.5■■■■□ 3.27
CFL1-211ENST00000531407 MAGI1Q96QZ7 1491 aaPredicted RBP35.48■■■■□ 3.27
CFL1-211ENST00000531407 TOP2BQ02880 1626 aa35.48■■■■□ 3.27
CFL1-211ENST00000531407 CHD1O14646 1710 aa35.47■■■■□ 3.27
CFL1-211ENST00000531407 GAPVD1Q14C86 1478 aa35.45■■■■□ 3.27
CFL1-211ENST00000531407 BIVM-ERCC5R4GMW8 1640 aa35.45■■■■□ 3.27
CFL1-211ENST00000531407 CHMP7Q8WUX9 453 aaPredicted RBP35.43■■■■□ 3.26
CFL1-211ENST00000531407 ARAP1Q96P48 1450 aa35.41■■■■□ 3.26
CFL1-211ENST00000531407 SYNJ1O43426 1573 aa35.41■■■■□ 3.26
CFL1-211ENST00000531407 ABCA5Q8WWZ7 1642 aa35.36■■■■□ 3.25
CFL1-211ENST00000531407 TRHP20396 242 aaPredicted RBP35.35■■■■□ 3.25
CFL1-211ENST00000531407 SYNJ2O15056 1496 aa35.35■■■■□ 3.25
CFL1-211ENST00000531407 PBRM1Q86U86 1689 aa35.3■■■■□ 3.24
CFL1-211ENST00000531407 CLASP1Q7Z460 1538 aa35.22■■■■□ 3.23
CFL1-211ENST00000531407 ERICH3Q5RHP9 1530 aa35.09■■■■□ 3.21
CFL1-211ENST00000531407 ADAMTS12P58397 1594 aa35.07■■■■□ 3.2
CFL1-211ENST00000531407 FHAD1B1AJZ9 1412 aa35.06■■■■□ 3.2
CFL1-211ENST00000531407 GRIN2AQ12879 1464 aa35.05■■■■□ 3.2
CFL1-211ENST00000531407 NUP160Q12769 1436 aa34.92■■■■□ 3.18
CFL1-211ENST00000531407 KIF27Q86VH2 1401 aa34.87■■■■□ 3.17
CFL1-211ENST00000531407 CEP170Q5SW79 1584 aa34.84■■■■□ 3.17
CFL1-211ENST00000531407 IGF1RP08069 1367 aa34.74■■■■□ 3.15
CFL1-211ENST00000531407 SHROOM2Q13796 1616 aa34.66■■■■□ 3.14
CFL1-211ENST00000531407 CUL7Q14999 1698 aa34.66■■■■□ 3.14
CFL1-211ENST00000531407 ERCC6L2Q5T890 1561 aa34.6■■■■□ 3.13
CFL1-211ENST00000531407 RUSC2Q8N2Y8 1516 aa34.56■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms