RNA–Protein interactions for RNA: ENST00000372259.9

ERI3-202, Transcript of ERI1 exoribonuclease family member 3, humanhuman

TSL 5 BASIC

Gene ERI3, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERI3-202ENST00000372259 NISCHQ9Y2I1 1504 aa24.24■■□□□ 1.47
ERI3-202ENST00000372259 CCDC180Q9P1Z9 1646 aa21.56■■□□□ 1.04
ERI3-202ENST00000372259 ABCC9O60706 1549 aa21.32■■□□□ 1
ERI3-202ENST00000372259 DNAJC5BQ9UF47 199 aa20.74■□□□□ 0.91
ERI3-202ENST00000372259 DCAF8L2P0C7V8 631 aa20.48■□□□□ 0.87
ERI3-202ENST00000372259 RB1CC1Q8TDY2 1594 aa20.32■□□□□ 0.84
ERI3-202ENST00000372259 NACADO15069 1562 aa20.27■□□□□ 0.84
ERI3-202ENST00000372259 ZCCHC6Q5VYS8 1495 aaKnown RBP20.17■□□□□ 0.82
ERI3-202ENST00000372259 MYO15BQ96JP2 1530 aa20.06■□□□□ 0.8
ERI3-202ENST00000372259 DCAF1Q9Y4B6 1507 aa20■□□□□ 0.79
ERI3-202ENST00000372259 UNC13AQ9UPW8 1703 aa19.84■□□□□ 0.77
ERI3-202ENST00000372259 PABPN1Q86U42 306 aaKnown RBP eCLIP19.77■□□□□ 0.76
ERI3-202ENST00000372259 SCRIBQ14160 1630 aa19.74■□□□□ 0.75
ERI3-202ENST00000372259 DNAJC5Q9H3Z4 198 aa19.65■□□□□ 0.74
ERI3-202ENST00000372259 BICRAQ9NZM4 1560 aa19.59■□□□□ 0.73
ERI3-202ENST00000372259 SHROOM4Q9ULL8 1493 aa19.41■□□□□ 0.7
ERI3-202ENST00000372259 CECR2Q9BXF3 1484 aa19.28■□□□□ 0.68
ERI3-202ENST00000372259 CC2D2AQ9P2K1 1620 aa19.18■□□□□ 0.66
ERI3-202ENST00000372259 EIF4G1Q04637 1599 aaKnown RBP19.15■□□□□ 0.66
ERI3-202ENST00000372259 SMARCA4P51532 1647 aa18.82■□□□□ 0.6
ERI3-202ENST00000372259 BAZ1AQ9NRL2 1556 aaPredicted RBP18.82■□□□□ 0.6
ERI3-202ENST00000372259 SMARCA2P51531 1590 aa18.72■□□□□ 0.59
ERI3-202ENST00000372259 ATAD2BQ9ULI0 1458 aa18.7■□□□□ 0.58
ERI3-202ENST00000372259 CUX2O14529 1486 aa18.68■□□□□ 0.58
ERI3-202ENST00000372259 MROH2BQ7Z745 1585 aa18.68■□□□□ 0.58
ERI3-202ENST00000372259 NCAPD3P42695 1498 aa18.65■□□□□ 0.58
ERI3-202ENST00000372259 BAZ1BQ9UIG0 1483 aaKnown RBP18.62■□□□□ 0.57
ERI3-202ENST00000372259 HMGXB3Q12766 1538 aa18.58■□□□□ 0.57
ERI3-202ENST00000372259 PEG3Q9GZU2 1588 aa18.56■□□□□ 0.56
ERI3-202ENST00000372259 WIZO95785 1651 aa18.52■□□□□ 0.56
ERI3-202ENST00000372259 TRIM41Q8WV44 630 aa18.49■□□□□ 0.55
ERI3-202ENST00000372259 RSF1Q96T23 1441 aaPredicted RBP18.48■□□□□ 0.55
ERI3-202ENST00000372259 ERCC6Q03468 1493 aa18.47■□□□□ 0.55
ERI3-202ENST00000372259 TOP2AP11388 1531 aaKnown RBP18.31■□□□□ 0.52
ERI3-202ENST00000372259 NESP48681 1621 aa18.25■□□□□ 0.51
ERI3-202ENST00000372259 LAMC3Q9Y6N6 1575 aa18.22■□□□□ 0.51
ERI3-202ENST00000372259 SUPT5HO00267 1087 aaKnown RBP18.22■□□□□ 0.51
ERI3-202ENST00000372259 CADPSQ9ULU8 1353 aa18.16■□□□□ 0.5
ERI3-202ENST00000372259 PDS5BQ9NTI5 1447 aa18.13■□□□□ 0.49
ERI3-202ENST00000372259 CCDC88BA6NC98 1476 aa18.09■□□□□ 0.49
ERI3-202ENST00000372259 KIF21AQ7Z4S6 1674 aa18.07■□□□□ 0.48
ERI3-202ENST00000372259 CFTRP13569 1480 aa18.02■□□□□ 0.48
ERI3-202ENST00000372259 THOC2Q8NI27 1593 aaKnown RBP18■□□□□ 0.47
ERI3-202ENST00000372259 FANCD2Q9BXW9 1451 aa17.98■□□□□ 0.47
ERI3-202ENST00000372259 CEP164Q9UPV0 1460 aa17.98■□□□□ 0.47
ERI3-202ENST00000372259 PRDM2Q13029 1718 aa17.97■□□□□ 0.47
ERI3-202ENST00000372259 MRC2Q9UBG0 1479 aa17.93■□□□□ 0.46
ERI3-202ENST00000372259 WDR62O43379 1518 aa17.82■□□□□ 0.44
ERI3-202ENST00000372259 URB2Q14146 1524 aaKnown RBP17.75■□□□□ 0.43
ERI3-202ENST00000372259 OSCARQ8IYS5 282 aa17.74■□□□□ 0.43
ERI3-202ENST00000372259 ABCC8Q09428 1581 aa17.71■□□□□ 0.43
ERI3-202ENST00000372259 TOPBP1Q92547 1522 aa17.68■□□□□ 0.42
ERI3-202ENST00000372259 DNMBPQ6XZF7 1577 aa17.67■□□□□ 0.42
ERI3-202ENST00000372259 AEBP2Q6ZN18 517 aaPredicted RBP17.61■□□□□ 0.41
ERI3-202ENST00000372259 IFT140Q96RY7 1462 aa17.58■□□□□ 0.4
ERI3-202ENST00000372259 RIMBP3CA6NJZ7 1639 aa17.55■□□□□ 0.4
ERI3-202ENST00000372259 RIMBP3BA6NNM3 1639 aa17.55■□□□□ 0.4
ERI3-202ENST00000372259 RIMBP3Q9UFD9 1639 aa17.55■□□□□ 0.4
ERI3-202ENST00000372259 CUX1P39880 1505 aa17.53■□□□□ 0.4
ERI3-202ENST00000372259 POLA1P09884 1462 aaPredicted RBP17.52■□□□□ 0.39
ERI3-202ENST00000372259 FGD5Q6ZNL6 1462 aa17.5■□□□□ 0.39
ERI3-202ENST00000372259 SOGA1O94964 1423 aa17.5■□□□□ 0.39
ERI3-202ENST00000372259 TRHP20396 242 aaPredicted RBP17.49■□□□□ 0.39
ERI3-202ENST00000372259 WRNQ14191 1432 aaPredicted RBP eCLIP17.48■□□□□ 0.39
ERI3-202ENST00000372259 RAD54L2Q9Y4B4 1467 aa17.47■□□□□ 0.39
ERI3-202ENST00000372259 ZNF608Q9ULD9 1512 aaPredicted RBP17.47■□□□□ 0.39
ERI3-202ENST00000372259 TARBP1Q13395 1621 aaKnown RBP17.44■□□□□ 0.38
ERI3-202ENST00000372259 EIF4G3O43432 1585 aaKnown RBP17.43■□□□□ 0.38
ERI3-202ENST00000372259 ARHGEF11O15085 1522 aa17.42■□□□□ 0.38
ERI3-202ENST00000372259 CYB5RLQ6IPT4 315 aa17.41■□□□□ 0.38
ERI3-202ENST00000372259 TOP2BQ02880 1626 aa17.4■□□□□ 0.38
ERI3-202ENST00000372259 SYNJ1O43426 1573 aa17.4■□□□□ 0.38
ERI3-202ENST00000372259 AQRO60306 1485 aaKnown RBP eCLIP17.4■□□□□ 0.382e-6■■■■□ 26.4
ERI3-202ENST00000372259 BIVM-ERCC5R4GMW8 1640 aa17.4■□□□□ 0.38
ERI3-202ENST00000372259 TDRD9Q8NDG6 1382 aaKnown RBP17.39■□□□□ 0.37
ERI3-202ENST00000372259 WDR97A6NE52 1622 aa17.34■□□□□ 0.37
ERI3-202ENST00000372259 FBLN2P98095 1184 aa17.33■□□□□ 0.36
ERI3-202ENST00000372259 ABCA10Q8WWZ4 1543 aa17.3■□□□□ 0.36
ERI3-202ENST00000372259 GAPVD1Q14C86 1478 aa17.28■□□□□ 0.36
ERI3-202ENST00000372259 GRIN2BQ13224 1484 aa17.28■□□□□ 0.36
ERI3-202ENST00000372259 PBRM1Q86U86 1689 aa17.27■□□□□ 0.36
ERI3-202ENST00000372259 SNAPC4Q5SXM2 1469 aa17.26■□□□□ 0.35
ERI3-202ENST00000372259 CHMP7Q8WUX9 453 aaPredicted RBP17.24■□□□□ 0.35
ERI3-202ENST00000372259 CHD1O14646 1710 aa17.23■□□□□ 0.35
ERI3-202ENST00000372259 ABCA5Q8WWZ7 1642 aa17.22■□□□□ 0.35
ERI3-202ENST00000372259 MAGI1Q96QZ7 1491 aaPredicted RBP17.22■□□□□ 0.35
ERI3-202ENST00000372259 ARAP1Q96P48 1450 aa17.19■□□□□ 0.34
ERI3-202ENST00000372259 SYNJ2O15056 1496 aa17.14■□□□□ 0.33
ERI3-202ENST00000372259 KIF27Q86VH2 1401 aa17.14■□□□□ 0.33
ERI3-202ENST00000372259 CHIC1Q5VXU3 224 aa17.13■□□□□ 0.33
ERI3-202ENST00000372259 ERICH3Q5RHP9 1530 aa17.11■□□□□ 0.33
ERI3-202ENST00000372259 ADAMTS12P58397 1594 aa17.08■□□□□ 0.33
ERI3-202ENST00000372259 FHAD1B1AJZ9 1412 aa17.08■□□□□ 0.33
ERI3-202ENST00000372259 GRIN2AQ12879 1464 aa17.04■□□□□ 0.32
ERI3-202ENST00000372259 CUL7Q14999 1698 aa17■□□□□ 0.31
ERI3-202ENST00000372259 RUSC2Q8N2Y8 1516 aa16.99■□□□□ 0.31
ERI3-202ENST00000372259 IGF1RP08069 1367 aa16.98■□□□□ 0.31
ERI3-202ENST00000372259 CLASP1Q7Z460 1538 aa16.96■□□□□ 0.31
ERI3-202ENST00000372259 ILDR1Q86SU0 546 aaPredicted RBP16.96■□□□□ 0.3
ERI3-202ENST00000372259 CARMIL1Q5VZK9 1371 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms