RNA–Protein interactions for RNA: ENST00000411482.1

LMO2-203, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,519 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-203ENST00000411482 NISCHQ9Y2I1 1504 aa43.62■■■■■ 4.57
LMO2-203ENST00000411482 CCDC180Q9P1Z9 1646 aa38.62■■■■□ 3.77
LMO2-203ENST00000411482 ABCC9O60706 1549 aa37.57■■■■□ 3.61
LMO2-203ENST00000411482 ZCCHC6Q5VYS8 1495 aaKnown RBP36.37■■■■□ 3.41
LMO2-203ENST00000411482 DCAF8L2P0C7V8 631 aa36.29■■■■□ 3.4
LMO2-203ENST00000411482 NACADO15069 1562 aa36.25■■■■□ 3.39
LMO2-203ENST00000411482 RB1CC1Q8TDY2 1594 aa36.2■■■■□ 3.39
LMO2-203ENST00000411482 MYO15BQ96JP2 1530 aa36.14■■■■□ 3.38
LMO2-203ENST00000411482 DCAF1Q9Y4B6 1507 aa36.09■■■■□ 3.37
LMO2-203ENST00000411482 UNC13AQ9UPW8 1703 aa35.51■■■■□ 3.28
LMO2-203ENST00000411482 SCRIBQ14160 1630 aa35.26■■■■□ 3.24
LMO2-203ENST00000411482 BICRAQ9NZM4 1560 aa35.22■■■■□ 3.23
LMO2-203ENST00000411482 PABPN1Q86U42 306 aaKnown RBP eCLIP35.18■■■■□ 3.22
LMO2-203ENST00000411482 SHROOM4Q9ULL8 1493 aa34.96■■■■□ 3.19
LMO2-203ENST00000411482 DNAJC5BQ9UF47 199 aa34.4■■■■□ 3.1
LMO2-203ENST00000411482 EIF4G1Q04637 1599 aaKnown RBP34.2■■■■□ 3.07
LMO2-203ENST00000411482 CC2D2AQ9P2K1 1620 aa34.01■■■■□ 3.04
LMO2-203ENST00000411482 CECR2Q9BXF3 1484 aa34■■■■□ 3.03
LMO2-203ENST00000411482 SUPT5HO00267 1087 aaKnown RBP33.9■■■■□ 3.02
LMO2-203ENST00000411482 SMARCA4P51532 1647 aa33.78■■■■□ 3
LMO2-203ENST00000411482 BAZ1AQ9NRL2 1556 aaPredicted RBP33.74■■■□□ 2.99
LMO2-203ENST00000411482 MROH2BQ7Z745 1585 aa33.64■■■□□ 2.98
LMO2-203ENST00000411482 ATAD2BQ9ULI0 1458 aa33.55■■■□□ 2.96
LMO2-203ENST00000411482 NCAPD3P42695 1498 aa33.5■■■□□ 2.95
LMO2-203ENST00000411482 PEG3Q9GZU2 1588 aa33.46■■■□□ 2.95
LMO2-203ENST00000411482 SMARCA2P51531 1590 aa33.46■■■□□ 2.95
LMO2-203ENST00000411482 RSF1Q96T23 1441 aaPredicted RBP33.35■■■□□ 2.93
LMO2-203ENST00000411482 HMGXB3Q12766 1538 aa33.3■■■□□ 2.92
LMO2-203ENST00000411482 WIZO95785 1651 aa33.29■■■□□ 2.92
LMO2-203ENST00000411482 BAZ1BQ9UIG0 1483 aaKnown RBP33.22■■■□□ 2.91
LMO2-203ENST00000411482 TOP2AP11388 1531 aaKnown RBP32.89■■■□□ 2.86
LMO2-203ENST00000411482 CHIC1Q5VXU3 224 aa32.85■■■□□ 2.85
LMO2-203ENST00000411482 NESP48681 1621 aa32.64■■■□□ 2.81
LMO2-203ENST00000411482 CCDC88BA6NC98 1476 aa32.56■■■□□ 2.8
LMO2-203ENST00000411482 CADPSQ9ULU8 1353 aa32.51■■■□□ 2.8
LMO2-203ENST00000411482 LAMC3Q9Y6N6 1575 aa32.51■■■□□ 2.8
LMO2-203ENST00000411482 CFTRP13569 1480 aa32.38■■■□□ 2.77
LMO2-203ENST00000411482 ERCC6Q03468 1493 aa32.28■■■□□ 2.76
LMO2-203ENST00000411482 PDS5BQ9NTI5 1447 aa32.27■■■□□ 2.76
LMO2-203ENST00000411482 KIF21AQ7Z4S6 1674 aa32.23■■■□□ 2.75
LMO2-203ENST00000411482 PRDM2Q13029 1718 aa32.14■■■□□ 2.74
LMO2-203ENST00000411482 FANCD2Q9BXW9 1451 aa32.12■■■□□ 2.73
LMO2-203ENST00000411482 THOC2Q8NI27 1593 aaKnown RBP32.05■■■□□ 2.72
LMO2-203ENST00000411482 CEP164Q9UPV0 1460 aa32.02■■■□□ 2.72
LMO2-203ENST00000411482 MRC2Q9UBG0 1479 aa31.94■■■□□ 2.7
LMO2-203ENST00000411482 TRIM41Q8WV44 630 aa31.9■■■□□ 2.7
LMO2-203ENST00000411482 CUX2O14529 1486 aa31.89■■■□□ 2.69
LMO2-203ENST00000411482 WDR62O43379 1518 aa31.84■■■□□ 2.69
LMO2-203ENST00000411482 URB2Q14146 1524 aaKnown RBP31.83■■■□□ 2.69
LMO2-203ENST00000411482 TOPBP1Q92547 1522 aa31.65■■■□□ 2.66
LMO2-203ENST00000411482 ABCC8Q09428 1581 aa31.61■■■□□ 2.65
LMO2-203ENST00000411482 DNMBPQ6XZF7 1577 aa31.61■■■□□ 2.65
LMO2-203ENST00000411482 CUX1P39880 1505 aa31.54■■■□□ 2.64
LMO2-203ENST00000411482 LOC105371045A0A1W2PR82 267 aa31.52■■■□□ 2.64
LMO2-203ENST00000411482 POLA1P09884 1462 aaPredicted RBP31.41■■■□□ 2.62
LMO2-203ENST00000411482 WRNQ14191 1432 aaPredicted RBP eCLIP31.37■■■□□ 2.61
LMO2-203ENST00000411482 FGD5Q6ZNL6 1462 aa31.35■■■□□ 2.61
LMO2-203ENST00000411482 IFT140Q96RY7 1462 aa31.34■■■□□ 2.61
LMO2-203ENST00000411482 SYNJ1O43426 1573 aa31.33■■■□□ 2.61
LMO2-203ENST00000411482 TARBP1Q13395 1621 aaKnown RBP31.32■■■□□ 2.6
LMO2-203ENST00000411482 TOP2BQ02880 1626 aa31.3■■■□□ 2.6
LMO2-203ENST00000411482 BIVM-ERCC5R4GMW8 1640 aa31.3■■■□□ 2.6
LMO2-203ENST00000411482 RAD54L2Q9Y4B4 1467 aa31.29■■■□□ 2.6
LMO2-203ENST00000411482 SOGA1O94964 1423 aa31.27■■■□□ 2.6
LMO2-203ENST00000411482 ZNF608Q9ULD9 1512 aaPredicted RBP31.26■■■□□ 2.59
LMO2-203ENST00000411482 FAM9AQ8IZU1 332 aaPredicted RBP31.24■■■□□ 2.59
LMO2-203ENST00000411482 EEA1Q15075 1411 aa31.16■■■□□ 2.58
LMO2-203ENST00000411482 WDR97A6NE52 1622 aa31.11■■■□□ 2.57
LMO2-203ENST00000411482 AQRO60306 1485 aaKnown RBP eCLIP31.11■■■□□ 2.575e-7■■■□□ 19
LMO2-203ENST00000411482 TDRD9Q8NDG6 1382 aaKnown RBP31.09■■■□□ 2.57
LMO2-203ENST00000411482 EIF4G3O43432 1585 aaKnown RBP31.09■■■□□ 2.57
LMO2-203ENST00000411482 ABCA10Q8WWZ4 1543 aa31.07■■■□□ 2.56
LMO2-203ENST00000411482 ABCA5Q8WWZ7 1642 aa30.92■■■□□ 2.54
LMO2-203ENST00000411482 CSRNP3Q8WYN3 585 aa30.92■■■□□ 2.54
LMO2-203ENST00000411482 RUSC2Q8N2Y8 1516 aa30.9■■■□□ 2.54
LMO2-203ENST00000411482 GAPVD1Q14C86 1478 aa30.9■■■□□ 2.54
LMO2-203ENST00000411482 GRIN2BQ13224 1484 aa30.85■■■□□ 2.53
LMO2-203ENST00000411482 PBRM1Q86U86 1689 aa30.82■■■□□ 2.52
LMO2-203ENST00000411482 SNAPC4Q5SXM2 1469 aa30.77■■■□□ 2.52
LMO2-203ENST00000411482 TNIKQ9UKE5 1360 aa30.75■■■□□ 2.51
LMO2-203ENST00000411482 MAGI1Q96QZ7 1491 aaPredicted RBP30.73■■■□□ 2.51
LMO2-203ENST00000411482 DNAJC5Q9H3Z4 198 aa30.71■■■□□ 2.51
LMO2-203ENST00000411482 KIF21BO75037 1637 aa30.69■■■□□ 2.5
LMO2-203ENST00000411482 CHD1O14646 1710 aa30.68■■■□□ 2.5
LMO2-203ENST00000411482 ERICH3Q5RHP9 1530 aa30.68■■■□□ 2.5
LMO2-203ENST00000411482 GOLGA3Q08378 1498 aa30.68■■■□□ 2.5
LMO2-203ENST00000411482 KIF27Q86VH2 1401 aa30.68■■■□□ 2.5
LMO2-203ENST00000411482 EHMT2Q96KQ7 1210 aa30.66■■■□□ 2.5
LMO2-203ENST00000411482 OSCARQ8IYS5 282 aa30.65■■■□□ 2.5
LMO2-203ENST00000411482 IGF1RP08069 1367 aa30.62■■■□□ 2.49
LMO2-203ENST00000411482 SYNJ2O15056 1496 aa30.62■■■□□ 2.49
LMO2-203ENST00000411482 FBLN2P98095 1184 aa30.61■■■□□ 2.49
LMO2-203ENST00000411482 ADAMTS12P58397 1594 aa30.58■■■□□ 2.49
LMO2-203ENST00000411482 CHMP7Q8WUX9 453 aaPredicted RBP30.57■■■□□ 2.49
LMO2-203ENST00000411482 FHAD1B1AJZ9 1412 aa30.54■■■□□ 2.48
LMO2-203ENST00000411482 CEP162Q5TB80 1403 aa30.53■■■□□ 2.48
LMO2-203ENST00000411482 TRIM26Q12899 539 aaPredicted RBP30.5■■■□□ 2.47
LMO2-203ENST00000411482 PCGF6Q9BYE7 350 aa30.5■■■□□ 2.47
LMO2-203ENST00000411482 GRIN2AQ12879 1464 aa30.46■■■□□ 2.47
LMO2-203ENST00000411482 PRXQ9BXM0 1461 aa30.45■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms