RNA–Protein interactions for RNA: ENST00000469562.1

MFSD2B-204, Transcript of major facilitator superfamily domain containing 2B, humanhuman

TSL 1 (best)

Gene MFSD2B, Length 2,613 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MFSD2B-204ENST00000469562 NISCHQ9Y2I1 1504 aa32.22■■■□□ 2.75
MFSD2B-204ENST00000469562 SHROOM4Q9ULL8 1493 aa27.54■■■□□ 2
MFSD2B-204ENST00000469562 CCDC180Q9P1Z9 1646 aa27.36■■□□□ 1.97
MFSD2B-204ENST00000469562 ZCCHC6Q5VYS8 1495 aaKnown RBP27.22■■□□□ 1.95
MFSD2B-204ENST00000469562 SUPT5HO00267 1087 aaKnown RBP26.99■■□□□ 1.91
MFSD2B-204ENST00000469562 DCAF8L2P0C7V8 631 aa26.92■■□□□ 1.9
MFSD2B-204ENST00000469562 DCAF1Q9Y4B6 1507 aa26.37■■□□□ 1.81
MFSD2B-204ENST00000469562 CHIC1Q5VXU3 224 aa26.15■■□□□ 1.78
MFSD2B-204ENST00000469562 MYO15BQ96JP2 1530 aa25.98■■□□□ 1.75
MFSD2B-204ENST00000469562 PPARGC1BQ86YN6 1023 aaKnown RBP25.88■■□□□ 1.73
MFSD2B-204ENST00000469562 HRCP23327 699 aa25.79■■□□□ 1.72
MFSD2B-204ENST00000469562 SCRIBQ14160 1630 aa25.73■■□□□ 1.71
MFSD2B-204ENST00000469562 ABCC9O60706 1549 aa25.65■■□□□ 1.7
MFSD2B-204ENST00000469562 PELP1Q8IZL8 1130 aaKnown RBP25.5■■□□□ 1.67
MFSD2B-204ENST00000469562 RSF1Q96T23 1441 aaPredicted RBP25.49■■□□□ 1.67
MFSD2B-204ENST00000469562 LOC105371045A0A1W2PR82 267 aa25.41■■□□□ 1.66
MFSD2B-204ENST00000469562 NACADO15069 1562 aa25.36■■□□□ 1.65
MFSD2B-204ENST00000469562 PCGF6Q9BYE7 350 aa25.3■■□□□ 1.64
MFSD2B-204ENST00000469562 RB1CC1Q8TDY2 1594 aa25.2■■□□□ 1.62
MFSD2B-204ENST00000469562 CECR2Q9BXF3 1484 aa25.17■■□□□ 1.62
MFSD2B-204ENST00000469562 SCAF1Q9H7N4 1312 aaKnown RBP25.15■■□□□ 1.62
MFSD2B-204ENST00000469562 TRIM41Q8WV44 630 aa25.13■■□□□ 1.61
MFSD2B-204ENST00000469562 MROH2BQ7Z745 1585 aa25.06■■□□□ 1.6
MFSD2B-204ENST00000469562 FAM9AQ8IZU1 332 aaPredicted RBP24.97■■□□□ 1.59
MFSD2B-204ENST00000469562 WIZO95785 1651 aa24.92■■□□□ 1.58
MFSD2B-204ENST00000469562 TRIM26Q12899 539 aaPredicted RBP24.8■■□□□ 1.56
MFSD2B-204ENST00000469562 EHMT2Q96KQ7 1210 aa24.8■■□□□ 1.56
MFSD2B-204ENST00000469562 BAZ1AQ9NRL2 1556 aaPredicted RBP24.74■■□□□ 1.55
MFSD2B-204ENST00000469562 UNC13AQ9UPW8 1703 aa24.56■■□□□ 1.52
MFSD2B-204ENST00000469562 SMARCA4P51532 1647 aa24.54■■□□□ 1.52
MFSD2B-204ENST00000469562 TOP2AP11388 1531 aaKnown RBP24.5■■□□□ 1.51
MFSD2B-204ENST00000469562 MYT1Q01538 1121 aa24.5■■□□□ 1.51
MFSD2B-204ENST00000469562 EIF4G1Q04637 1599 aaKnown RBP24.47■■□□□ 1.51
MFSD2B-204ENST00000469562 PABPN1Q86U42 306 aaKnown RBP eCLIP24.47■■□□□ 1.51
MFSD2B-204ENST00000469562 CCDC88BA6NC98 1476 aa24.44■■□□□ 1.5
MFSD2B-204ENST00000469562 SMARCA2P51531 1590 aa24.37■■□□□ 1.49
MFSD2B-204ENST00000469562 ABCC8Q09428 1581 aa24.36■■□□□ 1.49
MFSD2B-204ENST00000469562 ZEB1P37275 1124 aaPredicted RBP24.3■■□□□ 1.48
MFSD2B-204ENST00000469562 BICRAQ9NZM4 1560 aa24.28■■□□□ 1.48
MFSD2B-204ENST00000469562 NEUROD1Q13562 356 aa24.17■■□□□ 1.46
MFSD2B-204ENST00000469562 SOGA1O94964 1423 aa24.13■■□□□ 1.45
MFSD2B-204ENST00000469562 GTF3C3Q9Y5Q9 886 aa24.08■■□□□ 1.45
MFSD2B-204ENST00000469562 PEG3Q9GZU2 1588 aa24.02■■□□□ 1.44
MFSD2B-204ENST00000469562 CSRNP3Q8WYN3 585 aa24.02■■□□□ 1.44
MFSD2B-204ENST00000469562 RUSC2Q8N2Y8 1516 aa24.02■■□□□ 1.44
MFSD2B-204ENST00000469562 ACIN1Q9UKV3 1341 aaKnown RBP24■■□□□ 1.43
MFSD2B-204ENST00000469562 CEP162Q5TB80 1403 aa23.98■■□□□ 1.43
MFSD2B-204ENST00000469562 UBTFP17480 764 aaKnown RBP23.97■■□□□ 1.43
MFSD2B-204ENST00000469562 WRNQ14191 1432 aaPredicted RBP eCLIP23.96■■□□□ 1.43
MFSD2B-204ENST00000469562 TTBK1Q5TCY1 1321 aaPredicted RBP23.96■■□□□ 1.43
MFSD2B-204ENST00000469562 ATAD2BQ9ULI0 1458 aa23.96■■□□□ 1.43
MFSD2B-204ENST00000469562 EEA1Q15075 1411 aa23.95■■□□□ 1.43
MFSD2B-204ENST00000469562 TNIKQ9UKE5 1360 aa23.93■■□□□ 1.42
MFSD2B-204ENST00000469562 BAZ1BQ9UIG0 1483 aaKnown RBP23.91■■□□□ 1.42
MFSD2B-204ENST00000469562 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.87■■□□□ 1.41
MFSD2B-204ENST00000469562 SYNJ1O43426 1573 aa23.82■■□□□ 1.4
MFSD2B-204ENST00000469562 CCER1Q8TC90 406 aaPredicted RBP23.81■■□□□ 1.4
MFSD2B-204ENST00000469562 GOLGA3Q08378 1498 aa23.81■■□□□ 1.4
MFSD2B-204ENST00000469562 BCL11AQ9H165 835 aa23.76■■□□□ 1.39
MFSD2B-204ENST00000469562 CEP164Q9UPV0 1460 aa23.68■■□□□ 1.38
MFSD2B-204ENST00000469562 KIF21BO75037 1637 aa23.61■■□□□ 1.37
MFSD2B-204ENST00000469562 RANGAP1P46060 587 aaPredicted RBP23.57■■□□□ 1.36
MFSD2B-204ENST00000469562 CLIP1P30622 1438 aa23.56■■□□□ 1.36
MFSD2B-204ENST00000469562 RAPGEF2Q9Y4G8 1499 aa23.54■■□□□ 1.36
MFSD2B-204ENST00000469562 TOP2BQ02880 1626 aa23.51■■□□□ 1.35
MFSD2B-204ENST00000469562 NCAPD3P42695 1498 aa23.48■■□□□ 1.35
MFSD2B-204ENST00000469562 PRKCSHP14314 528 aaPredicted RBP23.46■■□□□ 1.35
MFSD2B-204ENST00000469562 HMGXB3Q12766 1538 aa23.44■■□□□ 1.34
MFSD2B-204ENST00000469562 VPS8Q8N3P4 1428 aa23.42■■□□□ 1.34
MFSD2B-204ENST00000469562 APLP2Q06481 763 aa23.42■■□□□ 1.34
MFSD2B-204ENST00000469562 YTHDC1Q96MU7 727 aaKnown RBP23.42■■□□□ 1.34
MFSD2B-204ENST00000469562 BIVM-ERCC5R4GMW8 1640 aa23.4■■□□□ 1.34
MFSD2B-204ENST00000469562 HNRNPUL2Q1KMD3 747 aaKnown RBP23.4■■□□□ 1.34
MFSD2B-204ENST00000469562 CENPBP07199 599 aaPredicted RBP23.36■■□□□ 1.33
MFSD2B-204ENST00000469562 CUX1P39880 1505 aa23.33■■□□□ 1.33
MFSD2B-204ENST00000469562 CFTRP13569 1480 aa23.28■■□□□ 1.32
MFSD2B-204ENST00000469562 PRXQ9BXM0 1461 aa23.28■■□□□ 1.32
MFSD2B-204ENST00000469562 DIEXFQ68CQ4 756 aaKnown RBP23.27■■□□□ 1.32
MFSD2B-204ENST00000469562 ERICH3Q5RHP9 1530 aa23.24■■□□□ 1.31
MFSD2B-204ENST00000469562 KIF27Q86VH2 1401 aa23.24■■□□□ 1.31
MFSD2B-204ENST00000469562 ARAP1Q96P48 1450 aa23.16■■□□□ 1.3
MFSD2B-204ENST00000469562 ZNF316A6NFI3 1004 aaPredicted RBP23.11■■□□□ 1.29
MFSD2B-204ENST00000469562 KANK4Q5T7N3 995 aaPredicted RBP23.09■■□□□ 1.29
MFSD2B-204ENST00000469562 CADPSQ9ULU8 1353 aa23.07■■□□□ 1.28
MFSD2B-204ENST00000469562 CUX2O14529 1486 aa23.05■■□□□ 1.28
MFSD2B-204ENST00000469562 ANP32EQ9BTT0 268 aa23.02■■□□□ 1.28
MFSD2B-204ENST00000469562 PRDM2Q13029 1718 aa23.01■■□□□ 1.27
MFSD2B-204ENST00000469562 IGF1RP08069 1367 aa22.99■■□□□ 1.27
MFSD2B-204ENST00000469562 ARHGAP35Q9NRY4 1499 aa22.98■■□□□ 1.27
MFSD2B-204ENST00000469562 FGD5Q6ZNL6 1462 aa22.95■■□□□ 1.26
MFSD2B-204ENST00000469562 CC2D2AQ9P2K1 1620 aa22.94■■□□□ 1.26
MFSD2B-204ENST00000469562 CARMIL1Q5VZK9 1371 aa22.91■■□□□ 1.26
MFSD2B-204ENST00000469562 FANCD2Q9BXW9 1451 aa22.85■■□□□ 1.25
MFSD2B-204ENST00000469562 RRBP1Q9P2E9 1410 aaKnown RBP22.84■■□□□ 1.25
MFSD2B-204ENST00000469562 DHX57Q6P158 1386 aaKnown RBP22.84■■□□□ 1.25
MFSD2B-204ENST00000469562 ITGAEP38570 1179 aa22.84■■□□□ 1.25
MFSD2B-204ENST00000469562 CCNB3Q8WWL7 1395 aa22.81■■□□□ 1.24
MFSD2B-204ENST00000469562 MIER1Q8N108 512 aa22.78■■□□□ 1.24
MFSD2B-204ENST00000469562 CLSPNQ9HAW4 1339 aa22.78■■□□□ 1.24
MFSD2B-204ENST00000469562 P3H3Q8IVL6 736 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms