Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
CSNK1G1Q9HCP0 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
CSNK1G1Q9HCP0 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
CSNK1G1Q9HCP0 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CSNK1G1Q9HCP0 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CSNK1G1Q9HCP0 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CSNK1G1Q9HCP0 DRD5P2-201ENST00000421395 2012 ntBASIC26.62■■□□□ 1.85
CSNK1G1Q9HCP0 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CSNK1G1Q9HCP0 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CSNK1G1Q9HCP0 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
CSNK1G1Q9HCP0 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CSNK1G1Q9HCP0 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CSNK1G1Q9HCP0 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CSNK1G1Q9HCP0 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
CSNK1G1Q9HCP0 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CSNK1G1Q9HCP0 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
CSNK1G1Q9HCP0 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CSNK1G1Q9HCP0 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CSNK1G1Q9HCP0 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.61■■□□□ 1.85
CSNK1G1Q9HCP0 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CSNK1G1Q9HCP0 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.61■■□□□ 1.85
CSNK1G1Q9HCP0 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.6■■□□□ 1.85
CSNK1G1Q9HCP0 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
CSNK1G1Q9HCP0 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CSNK1G1Q9HCP0 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
CSNK1G1Q9HCP0 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CSNK1G1Q9HCP0 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CSNK1G1Q9HCP0 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.59■■□□□ 1.85
CSNK1G1Q9HCP0 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.58■■□□□ 1.85
CSNK1G1Q9HCP0 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CSNK1G1Q9HCP0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CSNK1G1Q9HCP0 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CSNK1G1Q9HCP0 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
CSNK1G1Q9HCP0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.58■■□□□ 1.85
CSNK1G1Q9HCP0 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CSNK1G1Q9HCP0 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
CSNK1G1Q9HCP0 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.56■■□□□ 1.84
CSNK1G1Q9HCP0 AC018358.1-201ENST00000631079 1402 ntBASIC26.56■■□□□ 1.84
CSNK1G1Q9HCP0 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CSNK1G1Q9HCP0 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
CSNK1G1Q9HCP0 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CSNK1G1Q9HCP0 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.54■■□□□ 1.84
CSNK1G1Q9HCP0 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.54■■□□□ 1.84
CSNK1G1Q9HCP0 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CSNK1G1Q9HCP0 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.54■■□□□ 1.84
CSNK1G1Q9HCP0 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CSNK1G1Q9HCP0 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.54■■□□□ 1.84
CSNK1G1Q9HCP0 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CSNK1G1Q9HCP0 ABHD17AP3-201ENST00000503096 1137 ntBASIC26.53■■□□□ 1.84
CSNK1G1Q9HCP0 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
CSNK1G1Q9HCP0 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
CSNK1G1Q9HCP0 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
CSNK1G1Q9HCP0 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CSNK1G1Q9HCP0 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CSNK1G1Q9HCP0 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CSNK1G1Q9HCP0 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.51■■□□□ 1.83
CSNK1G1Q9HCP0 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.51■■□□□ 1.83
CSNK1G1Q9HCP0 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.51■■□□□ 1.83
CSNK1G1Q9HCP0 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CSNK1G1Q9HCP0 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CSNK1G1Q9HCP0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.5■■□□□ 1.83
CSNK1G1Q9HCP0 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CSNK1G1Q9HCP0 HSD17B1P1-201ENST00000590052 955 ntBASIC26.5■■□□□ 1.83
CSNK1G1Q9HCP0 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
CSNK1G1Q9HCP0 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CSNK1G1Q9HCP0 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.49■■□□□ 1.83
CSNK1G1Q9HCP0 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.49■■□□□ 1.83
CSNK1G1Q9HCP0 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
CSNK1G1Q9HCP0 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
CSNK1G1Q9HCP0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.49■■□□□ 1.83
CSNK1G1Q9HCP0 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CSNK1G1Q9HCP0 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
CSNK1G1Q9HCP0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
CSNK1G1Q9HCP0 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
CSNK1G1Q9HCP0 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.47■■□□□ 1.83
CSNK1G1Q9HCP0 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CSNK1G1Q9HCP0 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CSNK1G1Q9HCP0 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CSNK1G1Q9HCP0 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CSNK1G1Q9HCP0 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.46■■□□□ 1.83
CSNK1G1Q9HCP0 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
CSNK1G1Q9HCP0 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CSNK1G1Q9HCP0 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
CSNK1G1Q9HCP0 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.45■■□□□ 1.82
CSNK1G1Q9HCP0 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.44■■□□□ 1.82
CSNK1G1Q9HCP0 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
CSNK1G1Q9HCP0 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.44■■□□□ 1.82
CSNK1G1Q9HCP0 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CSNK1G1Q9HCP0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.44■■□□□ 1.82
CSNK1G1Q9HCP0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
CSNK1G1Q9HCP0 GPX1-201ENST00000419349 1106 ntBASIC26.43■■□□□ 1.82
CSNK1G1Q9HCP0 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
CSNK1G1Q9HCP0 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
CSNK1G1Q9HCP0 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.42■■□□□ 1.82
CSNK1G1Q9HCP0 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
CSNK1G1Q9HCP0 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
CSNK1G1Q9HCP0 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
CSNK1G1Q9HCP0 AC022413.1-201ENST00000624602 984 ntBASIC26.42■■□□□ 1.82
CSNK1G1Q9HCP0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CSNK1G1Q9HCP0 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms