Protein–RNA interactions for Protein: Q9H5V8

CDCP1, CUB domain-containing protein 1, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1Q9H5V8 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CDCP1Q9H5V8 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CDCP1Q9H5V8 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CDCP1Q9H5V8 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.41■■□□□ 1.34
CDCP1Q9H5V8 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
CDCP1Q9H5V8 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CDCP1Q9H5V8 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CDCP1Q9H5V8 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.4■■□□□ 1.34
CDCP1Q9H5V8 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.4■■□□□ 1.34
CDCP1Q9H5V8 MIR219A2-201ENST00000608502 1504 ntBASIC23.39■■□□□ 1.34
CDCP1Q9H5V8 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
CDCP1Q9H5V8 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CDCP1Q9H5V8 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
CDCP1Q9H5V8 AC022413.1-201ENST00000624602 984 ntBASIC23.39■■□□□ 1.33
CDCP1Q9H5V8 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.39■■□□□ 1.33
CDCP1Q9H5V8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CDCP1Q9H5V8 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDCP1Q9H5V8 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CDCP1Q9H5V8 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.38■■□□□ 1.33
CDCP1Q9H5V8 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDCP1Q9H5V8 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
CDCP1Q9H5V8 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CDCP1Q9H5V8 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.37■■□□□ 1.33
CDCP1Q9H5V8 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
CDCP1Q9H5V8 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDCP1Q9H5V8 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDCP1Q9H5V8 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.35■■□□□ 1.33
CDCP1Q9H5V8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC23.35■■□□□ 1.33
CDCP1Q9H5V8 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
CDCP1Q9H5V8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.34■■□□□ 1.33
CDCP1Q9H5V8 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CDCP1Q9H5V8 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CDCP1Q9H5V8 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
CDCP1Q9H5V8 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CDCP1Q9H5V8 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.34■■□□□ 1.33
CDCP1Q9H5V8 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.34■■□□□ 1.33
CDCP1Q9H5V8 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.33■■□□□ 1.33
CDCP1Q9H5V8 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.33■■□□□ 1.33
CDCP1Q9H5V8 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CDCP1Q9H5V8 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CDCP1Q9H5V8 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
CDCP1Q9H5V8 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDCP1Q9H5V8 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDCP1Q9H5V8 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDCP1Q9H5V8 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.31■■□□□ 1.32
CDCP1Q9H5V8 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDCP1Q9H5V8 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CDCP1Q9H5V8 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.31■■□□□ 1.32
CDCP1Q9H5V8 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDCP1Q9H5V8 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDCP1Q9H5V8 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
CDCP1Q9H5V8 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDCP1Q9H5V8 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CDCP1Q9H5V8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CDCP1Q9H5V8 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
CDCP1Q9H5V8 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDCP1Q9H5V8 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDCP1Q9H5V8 RNF126P1-201ENST00000567452 1320 ntBASIC23.29■■□□□ 1.32
CDCP1Q9H5V8 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
CDCP1Q9H5V8 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDCP1Q9H5V8 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDCP1Q9H5V8 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CDCP1Q9H5V8 RARRES2P2-201ENST00000394842 485 ntBASIC23.28■■□□□ 1.32
CDCP1Q9H5V8 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.28■■□□□ 1.32
CDCP1Q9H5V8 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CDCP1Q9H5V8 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDCP1Q9H5V8 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDCP1Q9H5V8 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.27■■□□□ 1.32
CDCP1Q9H5V8 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDCP1Q9H5V8 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CDCP1Q9H5V8 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CDCP1Q9H5V8 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CDCP1Q9H5V8 AP002414.2-202ENST00000590929 1450 ntBASIC23.25■■□□□ 1.31
CDCP1Q9H5V8 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
CDCP1Q9H5V8 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.25■■□□□ 1.31
CDCP1Q9H5V8 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.25■■□□□ 1.31
CDCP1Q9H5V8 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.25■■□□□ 1.31
CDCP1Q9H5V8 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDCP1Q9H5V8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
CDCP1Q9H5V8 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDCP1Q9H5V8 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
CDCP1Q9H5V8 AC060814.1-201ENST00000554326 538 ntBASIC23.24■■□□□ 1.31
CDCP1Q9H5V8 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.24■■□□□ 1.31
CDCP1Q9H5V8 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
CDCP1Q9H5V8 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDCP1Q9H5V8 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDCP1Q9H5V8 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDCP1Q9H5V8 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.22■■□□□ 1.31
CDCP1Q9H5V8 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDCP1Q9H5V8 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDCP1Q9H5V8 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.21■■□□□ 1.31
CDCP1Q9H5V8 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CDCP1Q9H5V8 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CDCP1Q9H5V8 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CDCP1Q9H5V8 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.21■■□□□ 1.31
CDCP1Q9H5V8 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDCP1Q9H5V8 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDCP1Q9H5V8 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDCP1Q9H5V8 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDCP1Q9H5V8 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms