Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
HDHD3Q9BSH5 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HDHD3Q9BSH5 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
HDHD3Q9BSH5 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HDHD3Q9BSH5 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HDHD3Q9BSH5 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.19■□□□□ 0.98
HDHD3Q9BSH5 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HDHD3Q9BSH5 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.18■□□□□ 0.98
HDHD3Q9BSH5 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HDHD3Q9BSH5 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
HDHD3Q9BSH5 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
HDHD3Q9BSH5 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.17■□□□□ 0.98
HDHD3Q9BSH5 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.17■□□□□ 0.98
HDHD3Q9BSH5 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
HDHD3Q9BSH5 AC135731.1-201ENST00000569415 2548 ntBASIC21.16■□□□□ 0.98
HDHD3Q9BSH5 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
HDHD3Q9BSH5 AC108673.1-201ENST00000510422 1159 ntBASIC21.16■□□□□ 0.98
HDHD3Q9BSH5 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HDHD3Q9BSH5 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
HDHD3Q9BSH5 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
HDHD3Q9BSH5 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HDHD3Q9BSH5 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HDHD3Q9BSH5 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.15■□□□□ 0.98
HDHD3Q9BSH5 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HDHD3Q9BSH5 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.15■□□□□ 0.98
HDHD3Q9BSH5 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HDHD3Q9BSH5 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
HDHD3Q9BSH5 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HDHD3Q9BSH5 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.14■□□□□ 0.98
HDHD3Q9BSH5 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HDHD3Q9BSH5 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HDHD3Q9BSH5 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HDHD3Q9BSH5 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HDHD3Q9BSH5 DUX4L28-201ENST00000623687 678 ntBASIC21.13■□□□□ 0.97
HDHD3Q9BSH5 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
HDHD3Q9BSH5 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HDHD3Q9BSH5 LINC00273-201ENST00000539813 1452 ntBASIC21.13■□□□□ 0.97
HDHD3Q9BSH5 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
HDHD3Q9BSH5 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
HDHD3Q9BSH5 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HDHD3Q9BSH5 AC091060.1-201ENST00000623524 1766 ntBASIC21.11■□□□□ 0.97
HDHD3Q9BSH5 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HDHD3Q9BSH5 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HDHD3Q9BSH5 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
HDHD3Q9BSH5 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HDHD3Q9BSH5 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
HDHD3Q9BSH5 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HDHD3Q9BSH5 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HDHD3Q9BSH5 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.1■□□□□ 0.97
HDHD3Q9BSH5 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.1■□□□□ 0.97
HDHD3Q9BSH5 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HDHD3Q9BSH5 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
HDHD3Q9BSH5 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HDHD3Q9BSH5 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HDHD3Q9BSH5 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HDHD3Q9BSH5 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
HDHD3Q9BSH5 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.09■□□□□ 0.97
HDHD3Q9BSH5 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HDHD3Q9BSH5 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HDHD3Q9BSH5 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
HDHD3Q9BSH5 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HDHD3Q9BSH5 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HDHD3Q9BSH5 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HDHD3Q9BSH5 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.08■□□□□ 0.97
HDHD3Q9BSH5 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HDHD3Q9BSH5 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HDHD3Q9BSH5 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
HDHD3Q9BSH5 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.07■□□□□ 0.96
HDHD3Q9BSH5 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.06■□□□□ 0.96
HDHD3Q9BSH5 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.06■□□□□ 0.96
HDHD3Q9BSH5 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HDHD3Q9BSH5 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HDHD3Q9BSH5 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HDHD3Q9BSH5 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.06■□□□□ 0.96
HDHD3Q9BSH5 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.05■□□□□ 0.96
HDHD3Q9BSH5 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.05■□□□□ 0.96
HDHD3Q9BSH5 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HDHD3Q9BSH5 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HDHD3Q9BSH5 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
HDHD3Q9BSH5 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HDHD3Q9BSH5 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HDHD3Q9BSH5 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.03■□□□□ 0.96
HDHD3Q9BSH5 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.02■□□□□ 0.96
HDHD3Q9BSH5 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HDHD3Q9BSH5 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HDHD3Q9BSH5 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.02■□□□□ 0.96
HDHD3Q9BSH5 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.02■□□□□ 0.96
HDHD3Q9BSH5 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
HDHD3Q9BSH5 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.02■□□□□ 0.95
HDHD3Q9BSH5 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
HDHD3Q9BSH5 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
HDHD3Q9BSH5 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
HDHD3Q9BSH5 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
HDHD3Q9BSH5 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
HDHD3Q9BSH5 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21■□□□□ 0.95
HDHD3Q9BSH5 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21■□□□□ 0.95
HDHD3Q9BSH5 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21■□□□□ 0.95
HDHD3Q9BSH5 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HDHD3Q9BSH5 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HDHD3Q9BSH5 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms