Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TTC16Q8NEE8 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
TTC16Q8NEE8 AC148477.6-201ENST00000623746 465 ntBASIC26.34■■□□□ 1.81
TTC16Q8NEE8 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TTC16Q8NEE8 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
TTC16Q8NEE8 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.33■■□□□ 1.81
TTC16Q8NEE8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TTC16Q8NEE8 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TTC16Q8NEE8 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.31■■□□□ 1.8
TTC16Q8NEE8 AL139393.2-201ENST00000608721 2025 ntBASIC26.31■■□□□ 1.8
TTC16Q8NEE8 ABCB10P3-201ENST00000561950 2166 ntBASIC26.3■■□□□ 1.8
TTC16Q8NEE8 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TTC16Q8NEE8 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TTC16Q8NEE8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
TTC16Q8NEE8 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
TTC16Q8NEE8 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.29■■□□□ 1.8
TTC16Q8NEE8 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TTC16Q8NEE8 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TTC16Q8NEE8 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TTC16Q8NEE8 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
TTC16Q8NEE8 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
TTC16Q8NEE8 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
TTC16Q8NEE8 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.28■■□□□ 1.8
TTC16Q8NEE8 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.28■■□□□ 1.8
TTC16Q8NEE8 AC060814.1-201ENST00000554326 538 ntBASIC26.28■■□□□ 1.8
TTC16Q8NEE8 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
TTC16Q8NEE8 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
TTC16Q8NEE8 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.27■■□□□ 1.8
TTC16Q8NEE8 AP004833.2-201ENST00000532228 1454 ntBASIC26.27■■□□□ 1.8
TTC16Q8NEE8 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TTC16Q8NEE8 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.26■■□□□ 1.79
TTC16Q8NEE8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
TTC16Q8NEE8 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
TTC16Q8NEE8 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TTC16Q8NEE8 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.25■■□□□ 1.79
TTC16Q8NEE8 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
TTC16Q8NEE8 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
TTC16Q8NEE8 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TTC16Q8NEE8 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TTC16Q8NEE8 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TTC16Q8NEE8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
TTC16Q8NEE8 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
TTC16Q8NEE8 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TTC16Q8NEE8 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TTC16Q8NEE8 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.22■■□□□ 1.79
TTC16Q8NEE8 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.22■■□□□ 1.79
TTC16Q8NEE8 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.21■■□□□ 1.79
TTC16Q8NEE8 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TTC16Q8NEE8 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.21■■□□□ 1.79
TTC16Q8NEE8 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
TTC16Q8NEE8 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
TTC16Q8NEE8 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TTC16Q8NEE8 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
TTC16Q8NEE8 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.2■■□□□ 1.78
TTC16Q8NEE8 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.2■■□□□ 1.78
TTC16Q8NEE8 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
TTC16Q8NEE8 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
TTC16Q8NEE8 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
TTC16Q8NEE8 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.18■■□□□ 1.78
TTC16Q8NEE8 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.18■■□□□ 1.78
TTC16Q8NEE8 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
TTC16Q8NEE8 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC26.17■■□□□ 1.78
TTC16Q8NEE8 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
TTC16Q8NEE8 AC126177.7-201ENST00000547904 679 ntBASIC26.17■■□□□ 1.78
TTC16Q8NEE8 NTF6A-201ENST00000591175 560 ntBASIC26.17■■□□□ 1.78
TTC16Q8NEE8 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.16■■□□□ 1.78
TTC16Q8NEE8 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
TTC16Q8NEE8 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.16■■□□□ 1.78
TTC16Q8NEE8 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.16■■□□□ 1.78
TTC16Q8NEE8 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.16■■□□□ 1.78
TTC16Q8NEE8 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.16■■□□□ 1.78
TTC16Q8NEE8 HYI-213ENST00000583037 1322 ntTSL 5 BASIC26.15■■□□□ 1.78
TTC16Q8NEE8 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
TTC16Q8NEE8 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
TTC16Q8NEE8 AC139426.1-201ENST00000568218 2529 ntBASIC26.15■■□□□ 1.78
TTC16Q8NEE8 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.15■■□□□ 1.78
TTC16Q8NEE8 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
TTC16Q8NEE8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.15■■□□□ 1.78
TTC16Q8NEE8 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
TTC16Q8NEE8 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
TTC16Q8NEE8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.14■■□□□ 1.78
TTC16Q8NEE8 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
TTC16Q8NEE8 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.14■■□□□ 1.78
TTC16Q8NEE8 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
TTC16Q8NEE8 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.14■■□□□ 1.78
TTC16Q8NEE8 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
TTC16Q8NEE8 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
TTC16Q8NEE8 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.13■■□□□ 1.77
TTC16Q8NEE8 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
TTC16Q8NEE8 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.12■■□□□ 1.77
TTC16Q8NEE8 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
TTC16Q8NEE8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.12■■□□□ 1.77
TTC16Q8NEE8 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC26.12■■□□□ 1.77
TTC16Q8NEE8 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.12■■□□□ 1.77
TTC16Q8NEE8 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TTC16Q8NEE8 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
TTC16Q8NEE8 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
TTC16Q8NEE8 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
TTC16Q8NEE8 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
TTC16Q8NEE8 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms