Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAI1Q7Z5J4 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAI1Q7Z5J4 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAI1Q7Z5J4 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAI1Q7Z5J4 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAI1Q7Z5J4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RAI1Q7Z5J4 AL157400.5-201ENST00000507624 621 ntBASIC21.76■■□□□ 1.07
RAI1Q7Z5J4 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAI1Q7Z5J4 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.76■■□□□ 1.07
RAI1Q7Z5J4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RAI1Q7Z5J4 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.75■■□□□ 1.07
RAI1Q7Z5J4 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RAI1Q7Z5J4 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.74■■□□□ 1.07
RAI1Q7Z5J4 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.74■■□□□ 1.07
RAI1Q7Z5J4 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAI1Q7Z5J4 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAI1Q7Z5J4 AC018358.1-201ENST00000631079 1402 ntBASIC21.74■■□□□ 1.07
RAI1Q7Z5J4 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAI1Q7Z5J4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RAI1Q7Z5J4 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAI1Q7Z5J4 U85056.1-201ENST00000616429 682 ntBASIC21.72■■□□□ 1.07
RAI1Q7Z5J4 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAI1Q7Z5J4 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAI1Q7Z5J4 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAI1Q7Z5J4 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RAI1Q7Z5J4 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.71■■□□□ 1.07
RAI1Q7Z5J4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RAI1Q7Z5J4 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.71■■□□□ 1.07
RAI1Q7Z5J4 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.07
RAI1Q7Z5J4 ABCB10P3-201ENST00000561950 2166 ntBASIC21.7■■□□□ 1.07
RAI1Q7Z5J4 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAI1Q7Z5J4 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RAI1Q7Z5J4 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
RAI1Q7Z5J4 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAI1Q7Z5J4 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.69■■□□□ 1.06
RAI1Q7Z5J4 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAI1Q7Z5J4 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAI1Q7Z5J4 AL033527.3-201ENST00000566366 1196 ntBASIC21.68■■□□□ 1.06
RAI1Q7Z5J4 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAI1Q7Z5J4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAI1Q7Z5J4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAI1Q7Z5J4 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.67■■□□□ 1.06
RAI1Q7Z5J4 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAI1Q7Z5J4 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RAI1Q7Z5J4 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.67■■□□□ 1.06
RAI1Q7Z5J4 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAI1Q7Z5J4 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.66■■□□□ 1.06
RAI1Q7Z5J4 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RAI1Q7Z5J4 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.66■■□□□ 1.06
RAI1Q7Z5J4 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RAI1Q7Z5J4 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RAI1Q7Z5J4 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
RAI1Q7Z5J4 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RAI1Q7Z5J4 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RAI1Q7Z5J4 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC21.66■■□□□ 1.06
RAI1Q7Z5J4 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
RAI1Q7Z5J4 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAI1Q7Z5J4 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RAI1Q7Z5J4 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
RAI1Q7Z5J4 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAI1Q7Z5J4 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
RAI1Q7Z5J4 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
RAI1Q7Z5J4 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAI1Q7Z5J4 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAI1Q7Z5J4 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAI1Q7Z5J4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.63■■□□□ 1.05
RAI1Q7Z5J4 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAI1Q7Z5J4 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.62■■□□□ 1.05
RAI1Q7Z5J4 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAI1Q7Z5J4 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.61■■□□□ 1.05
RAI1Q7Z5J4 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAI1Q7Z5J4 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.61■■□□□ 1.05
RAI1Q7Z5J4 AC139426.1-201ENST00000568218 2529 ntBASIC21.61■■□□□ 1.05
RAI1Q7Z5J4 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.61■■□□□ 1.05
RAI1Q7Z5J4 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAI1Q7Z5J4 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAI1Q7Z5J4 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.61■■□□□ 1.05
RAI1Q7Z5J4 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.61■■□□□ 1.05
RAI1Q7Z5J4 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.6■■□□□ 1.05
RAI1Q7Z5J4 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAI1Q7Z5J4 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
RAI1Q7Z5J4 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAI1Q7Z5J4 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.59■■□□□ 1.05
RAI1Q7Z5J4 ECEL1P2-201ENST00000461596 1295 ntBASIC21.59■■□□□ 1.05
RAI1Q7Z5J4 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
RAI1Q7Z5J4 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
RAI1Q7Z5J4 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.58■■□□□ 1.05
RAI1Q7Z5J4 TSPY13P-201ENST00000338964 914 ntBASIC21.58■■□□□ 1.04
RAI1Q7Z5J4 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RAI1Q7Z5J4 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RAI1Q7Z5J4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.57■■□□□ 1.04
RAI1Q7Z5J4 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.57■■□□□ 1.04
RAI1Q7Z5J4 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RAI1Q7Z5J4 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RAI1Q7Z5J4 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAI1Q7Z5J4 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
RAI1Q7Z5J4 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RAI1Q7Z5J4 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RAI1Q7Z5J4 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RAI1Q7Z5J4 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms