Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.49■■□□□ 1.83
SNX30Q5VWJ9 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.47■■□□□ 1.83
SNX30Q5VWJ9 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SNX30Q5VWJ9 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
SNX30Q5VWJ9 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SNX30Q5VWJ9 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SNX30Q5VWJ9 MIR219A2-201ENST00000608502 1504 ntBASIC26.46■■□□□ 1.83
SNX30Q5VWJ9 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SNX30Q5VWJ9 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.46■■□□□ 1.83
SNX30Q5VWJ9 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
SNX30Q5VWJ9 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.45■■□□□ 1.82
SNX30Q5VWJ9 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
SNX30Q5VWJ9 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.45■■□□□ 1.82
SNX30Q5VWJ9 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SNX30Q5VWJ9 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SNX30Q5VWJ9 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.45■■□□□ 1.82
SNX30Q5VWJ9 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SNX30Q5VWJ9 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SNX30Q5VWJ9 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SNX30Q5VWJ9 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
SNX30Q5VWJ9 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SNX30Q5VWJ9 GPX1-201ENST00000419349 1106 ntBASIC26.43■■□□□ 1.82
SNX30Q5VWJ9 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SNX30Q5VWJ9 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.43■■□□□ 1.82
SNX30Q5VWJ9 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.43■■□□□ 1.82
SNX30Q5VWJ9 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SNX30Q5VWJ9 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
SNX30Q5VWJ9 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.41■■□□□ 1.82
SNX30Q5VWJ9 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.41■■□□□ 1.82
SNX30Q5VWJ9 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SNX30Q5VWJ9 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.41■■□□□ 1.82
SNX30Q5VWJ9 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
SNX30Q5VWJ9 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SNX30Q5VWJ9 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SNX30Q5VWJ9 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SNX30Q5VWJ9 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
SNX30Q5VWJ9 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SNX30Q5VWJ9 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SNX30Q5VWJ9 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
SNX30Q5VWJ9 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.39■■□□□ 1.82
SNX30Q5VWJ9 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.39■■□□□ 1.82
SNX30Q5VWJ9 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SNX30Q5VWJ9 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
SNX30Q5VWJ9 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SNX30Q5VWJ9 AP002414.2-202ENST00000590929 1450 ntBASIC26.38■■□□□ 1.81
SNX30Q5VWJ9 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
SNX30Q5VWJ9 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.38■■□□□ 1.81
SNX30Q5VWJ9 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.38■■□□□ 1.81
SNX30Q5VWJ9 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
SNX30Q5VWJ9 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.37■■□□□ 1.81
SNX30Q5VWJ9 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
SNX30Q5VWJ9 AC022413.1-201ENST00000624602 984 ntBASIC26.37■■□□□ 1.81
SNX30Q5VWJ9 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.36■■□□□ 1.81
SNX30Q5VWJ9 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.36■■□□□ 1.81
SNX30Q5VWJ9 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SNX30Q5VWJ9 RNF126P1-201ENST00000567452 1320 ntBASIC26.36■■□□□ 1.81
SNX30Q5VWJ9 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
SNX30Q5VWJ9 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SNX30Q5VWJ9 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SNX30Q5VWJ9 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SNX30Q5VWJ9 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26.34■■□□□ 1.81
SNX30Q5VWJ9 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
SNX30Q5VWJ9 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.33■■□□□ 1.81
SNX30Q5VWJ9 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.33■■□□□ 1.81
SNX30Q5VWJ9 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SNX30Q5VWJ9 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SNX30Q5VWJ9 RARRES2P2-201ENST00000394842 485 ntBASIC26.32■■□□□ 1.8
SNX30Q5VWJ9 AC060814.1-201ENST00000554326 538 ntBASIC26.32■■□□□ 1.8
SNX30Q5VWJ9 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SNX30Q5VWJ9 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SNX30Q5VWJ9 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.31■■□□□ 1.8
SNX30Q5VWJ9 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.31■■□□□ 1.8
SNX30Q5VWJ9 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SNX30Q5VWJ9 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.3■■□□□ 1.8
SNX30Q5VWJ9 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.3■■□□□ 1.8
SNX30Q5VWJ9 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
SNX30Q5VWJ9 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SNX30Q5VWJ9 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SNX30Q5VWJ9 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SNX30Q5VWJ9 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SNX30Q5VWJ9 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SNX30Q5VWJ9 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
SNX30Q5VWJ9 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
SNX30Q5VWJ9 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
SNX30Q5VWJ9 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SNX30Q5VWJ9 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.28■■□□□ 1.8
SNX30Q5VWJ9 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SNX30Q5VWJ9 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
SNX30Q5VWJ9 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
SNX30Q5VWJ9 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SNX30Q5VWJ9 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SNX30Q5VWJ9 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.27■■□□□ 1.8
SNX30Q5VWJ9 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
SNX30Q5VWJ9 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SNX30Q5VWJ9 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SNX30Q5VWJ9 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.26■■□□□ 1.79
SNX30Q5VWJ9 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SNX30Q5VWJ9 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.26■■□□□ 1.79
SNX30Q5VWJ9 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
SNX30Q5VWJ9 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.24■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms