Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
VARS2Q5ST30 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.9■■□□□ 1.9
VARS2Q5ST30 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
VARS2Q5ST30 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.9■■□□□ 1.9
VARS2Q5ST30 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
VARS2Q5ST30 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
VARS2Q5ST30 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.89■■□□□ 1.9
VARS2Q5ST30 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
VARS2Q5ST30 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.89■■□□□ 1.9
VARS2Q5ST30 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.89■■□□□ 1.89
VARS2Q5ST30 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
VARS2Q5ST30 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
VARS2Q5ST30 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.88■■□□□ 1.89
VARS2Q5ST30 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
VARS2Q5ST30 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
VARS2Q5ST30 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
VARS2Q5ST30 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.88■■□□□ 1.89
VARS2Q5ST30 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.87■■□□□ 1.89
VARS2Q5ST30 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
VARS2Q5ST30 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.87■■□□□ 1.89
VARS2Q5ST30 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
VARS2Q5ST30 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.86■■□□□ 1.89
VARS2Q5ST30 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
VARS2Q5ST30 AC092296.2-201ENST00000589470 999 ntBASIC26.86■■□□□ 1.89
VARS2Q5ST30 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
VARS2Q5ST30 AC126177.7-201ENST00000547904 679 ntBASIC26.85■■□□□ 1.89
VARS2Q5ST30 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
VARS2Q5ST30 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
VARS2Q5ST30 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
VARS2Q5ST30 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
VARS2Q5ST30 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
VARS2Q5ST30 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
VARS2Q5ST30 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
VARS2Q5ST30 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
VARS2Q5ST30 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.83■■□□□ 1.89
VARS2Q5ST30 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
VARS2Q5ST30 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
VARS2Q5ST30 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.81■■□□□ 1.88
VARS2Q5ST30 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
VARS2Q5ST30 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.8■■□□□ 1.88
VARS2Q5ST30 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.8■■□□□ 1.88
VARS2Q5ST30 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.8■■□□□ 1.88
VARS2Q5ST30 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
VARS2Q5ST30 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
VARS2Q5ST30 NTF6A-201ENST00000591175 560 ntBASIC26.79■■□□□ 1.88
VARS2Q5ST30 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.79■■□□□ 1.88
VARS2Q5ST30 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
VARS2Q5ST30 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
VARS2Q5ST30 AP002414.2-202ENST00000590929 1450 ntBASIC26.78■■□□□ 1.88
VARS2Q5ST30 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
VARS2Q5ST30 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
VARS2Q5ST30 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
VARS2Q5ST30 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
VARS2Q5ST30 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
VARS2Q5ST30 ECEL1P2-201ENST00000461596 1295 ntBASIC26.77■■□□□ 1.88
VARS2Q5ST30 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
VARS2Q5ST30 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.77■■□□□ 1.88
VARS2Q5ST30 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.76■■□□□ 1.87
VARS2Q5ST30 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.76■■□□□ 1.87
VARS2Q5ST30 MOB2-207ENST00000614710 705 ntTSL 5 BASIC26.76■■□□□ 1.87
VARS2Q5ST30 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
VARS2Q5ST30 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
VARS2Q5ST30 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.75■■□□□ 1.87
VARS2Q5ST30 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.75■■□□□ 1.87
VARS2Q5ST30 AL157400.5-201ENST00000507624 621 ntBASIC26.75■■□□□ 1.87
VARS2Q5ST30 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
VARS2Q5ST30 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
VARS2Q5ST30 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
VARS2Q5ST30 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.74■■□□□ 1.87
VARS2Q5ST30 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
VARS2Q5ST30 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
VARS2Q5ST30 HYI-213ENST00000583037 1322 ntTSL 5 BASIC26.73■■□□□ 1.87
VARS2Q5ST30 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC26.73■■□□□ 1.87
VARS2Q5ST30 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
VARS2Q5ST30 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
VARS2Q5ST30 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
VARS2Q5ST30 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC26.72■■□□□ 1.87
VARS2Q5ST30 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
VARS2Q5ST30 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
VARS2Q5ST30 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
VARS2Q5ST30 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
VARS2Q5ST30 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
VARS2Q5ST30 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
VARS2Q5ST30 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
VARS2Q5ST30 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.7■■□□□ 1.87
VARS2Q5ST30 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
VARS2Q5ST30 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC26.7■■□□□ 1.86
VARS2Q5ST30 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.7■■□□□ 1.86
VARS2Q5ST30 U85056.1-201ENST00000616429 682 ntBASIC26.7■■□□□ 1.86
VARS2Q5ST30 AL359258.2-201ENST00000564063 1566 ntBASIC26.7■■□□□ 1.86
VARS2Q5ST30 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
VARS2Q5ST30 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
VARS2Q5ST30 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.69■■□□□ 1.86
VARS2Q5ST30 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
VARS2Q5ST30 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
VARS2Q5ST30 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
VARS2Q5ST30 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
VARS2Q5ST30 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
VARS2Q5ST30 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC26.67■■□□□ 1.86
VARS2Q5ST30 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.67■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms