Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.99■■□□□ 1.11
NKX6-1P78426 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
NKX6-1P78426 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.99■■□□□ 1.11
NKX6-1P78426 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
NKX6-1P78426 AC110285.7-201ENST00000624417 1536 ntBASIC21.98■■□□□ 1.11
NKX6-1P78426 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
NKX6-1P78426 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.98■■□□□ 1.11
NKX6-1P78426 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.97■■□□□ 1.11
NKX6-1P78426 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NKX6-1P78426 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NKX6-1P78426 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
NKX6-1P78426 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
NKX6-1P78426 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
NKX6-1P78426 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.96■■□□□ 1.11
NKX6-1P78426 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NKX6-1P78426 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NKX6-1P78426 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.96■■□□□ 1.11
NKX6-1P78426 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.95■■□□□ 1.11
NKX6-1P78426 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NKX6-1P78426 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NKX6-1P78426 AC100797.4-201ENST00000631653 1827 ntBASIC21.95■■□□□ 1.1
NKX6-1P78426 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
NKX6-1P78426 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.95■■□□□ 1.1
NKX6-1P78426 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NKX6-1P78426 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.95■■□□□ 1.1
NKX6-1P78426 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
NKX6-1P78426 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NKX6-1P78426 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NKX6-1P78426 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.94■■□□□ 1.1
NKX6-1P78426 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NKX6-1P78426 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
NKX6-1P78426 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NKX6-1P78426 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
NKX6-1P78426 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NKX6-1P78426 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NKX6-1P78426 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NKX6-1P78426 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
NKX6-1P78426 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NKX6-1P78426 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.93■■□□□ 1.1
NKX6-1P78426 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NKX6-1P78426 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
NKX6-1P78426 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NKX6-1P78426 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NKX6-1P78426 AC008813.1-201ENST00000536597 885 ntBASIC21.92■■□□□ 1.1
NKX6-1P78426 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.92■■□□□ 1.1
NKX6-1P78426 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NKX6-1P78426 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
NKX6-1P78426 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
NKX6-1P78426 ABCB10P3-201ENST00000561950 2166 ntBASIC21.91■■□□□ 1.1
NKX6-1P78426 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
NKX6-1P78426 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NKX6-1P78426 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NKX6-1P78426 AL033527.3-201ENST00000566366 1196 ntBASIC21.9■■□□□ 1.1
NKX6-1P78426 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.9■■□□□ 1.1
NKX6-1P78426 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NKX6-1P78426 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NKX6-1P78426 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
NKX6-1P78426 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.89■■□□□ 1.09
NKX6-1P78426 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NKX6-1P78426 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.89■■□□□ 1.09
NKX6-1P78426 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
NKX6-1P78426 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NKX6-1P78426 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
NKX6-1P78426 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
NKX6-1P78426 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
NKX6-1P78426 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
NKX6-1P78426 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NKX6-1P78426 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.88■■□□□ 1.09
NKX6-1P78426 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NKX6-1P78426 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.87■■□□□ 1.09
NKX6-1P78426 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
NKX6-1P78426 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.87■■□□□ 1.09
NKX6-1P78426 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NKX6-1P78426 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
NKX6-1P78426 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
NKX6-1P78426 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NKX6-1P78426 AC018358.1-201ENST00000631079 1402 ntBASIC21.86■■□□□ 1.09
NKX6-1P78426 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NKX6-1P78426 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
NKX6-1P78426 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NKX6-1P78426 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.85■■□□□ 1.09
NKX6-1P78426 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
NKX6-1P78426 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.85■■□□□ 1.09
NKX6-1P78426 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NKX6-1P78426 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NKX6-1P78426 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.84■■□□□ 1.09
NKX6-1P78426 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NKX6-1P78426 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
NKX6-1P78426 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NKX6-1P78426 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
NKX6-1P78426 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.83■■□□□ 1.09
NKX6-1P78426 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.83■■□□□ 1.08
NKX6-1P78426 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NKX6-1P78426 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NKX6-1P78426 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.82■■□□□ 1.08
NKX6-1P78426 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
NKX6-1P78426 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
NKX6-1P78426 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NKX6-1P78426 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.81■■□□□ 1.08
NKX6-1P78426 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms