Protein–RNA interactions for Protein: P50750

CDK9, Cyclin-dependent kinase 9, humanhuman

Known RBP Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9P50750 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.02■■□□□ 1.44
CDK9P50750 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CDK9P50750 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CDK9P50750 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.01■■□□□ 1.43
CDK9P50750 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.01■■□□□ 1.43
CDK9P50750 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CDK9P50750 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24■■□□□ 1.43
CDK9P50750 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CDK9P50750 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24■■□□□ 1.43
CDK9P50750 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24■■□□□ 1.43
CDK9P50750 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24■■□□□ 1.43
CDK9P50750 LINC00273-201ENST00000539813 1452 ntBASIC24■■□□□ 1.43
CDK9P50750 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CDK9P50750 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24■■□□□ 1.43
CDK9P50750 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.99■■□□□ 1.43
CDK9P50750 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
CDK9P50750 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.99■■□□□ 1.43
CDK9P50750 ABHD17AP4-201ENST00000411545 909 ntBASIC23.99■■□□□ 1.43
CDK9P50750 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CDK9P50750 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
CDK9P50750 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.98■■□□□ 1.43
CDK9P50750 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDK9P50750 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CDK9P50750 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CDK9P50750 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.97■■□□□ 1.43
CDK9P50750 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.97■■□□□ 1.43
CDK9P50750 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.97■■□□□ 1.43
CDK9P50750 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.97■■□□□ 1.43
CDK9P50750 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.97■■□□□ 1.43
CDK9P50750 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
CDK9P50750 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
CDK9P50750 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
CDK9P50750 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDK9P50750 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDK9P50750 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.96■■□□□ 1.43
CDK9P50750 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
CDK9P50750 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
CDK9P50750 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDK9P50750 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CDK9P50750 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDK9P50750 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CDK9P50750 AL449106.1-201ENST00000608517 1980 ntBASIC23.93■■□□□ 1.42
CDK9P50750 DUX4L29-201ENST00000425409 679 ntBASIC23.93■■□□□ 1.42
CDK9P50750 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDK9P50750 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.92■■□□□ 1.42
CDK9P50750 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDK9P50750 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
CDK9P50750 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDK9P50750 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.92■■□□□ 1.42
CDK9P50750 BX255925.1-201ENST00000566954 1854 ntBASIC23.92■■□□□ 1.42
CDK9P50750 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDK9P50750 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.91■■□□□ 1.42
CDK9P50750 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CDK9P50750 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDK9P50750 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CDK9P50750 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDK9P50750 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.91■■□□□ 1.42
CDK9P50750 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.91■■□□□ 1.42
CDK9P50750 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.91■■□□□ 1.42
CDK9P50750 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.9■■□□□ 1.42
CDK9P50750 AP002414.2-202ENST00000590929 1450 ntBASIC23.9■■□□□ 1.42
CDK9P50750 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.9■■□□□ 1.42
CDK9P50750 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CDK9P50750 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDK9P50750 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.9■■□□□ 1.42
CDK9P50750 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.89■■□□□ 1.42
CDK9P50750 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
CDK9P50750 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CDK9P50750 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CDK9P50750 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CDK9P50750 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CDK9P50750 AC021231.2-201ENST00000594613 730 ntBASIC23.88■■□□□ 1.41
CDK9P50750 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CDK9P50750 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDK9P50750 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDK9P50750 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDK9P50750 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.87■■□□□ 1.41
CDK9P50750 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
CDK9P50750 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDK9P50750 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CDK9P50750 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDK9P50750 LINC01003-201ENST00000564834 1764 ntBASIC23.87■■□□□ 1.41
CDK9P50750 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDK9P50750 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.87■■□□□ 1.41
CDK9P50750 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDK9P50750 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.86■■□□□ 1.41
CDK9P50750 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDK9P50750 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDK9P50750 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
CDK9P50750 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
CDK9P50750 ZNRF2P2-203ENST00000454624 420 ntBASIC23.85■■□□□ 1.41
CDK9P50750 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CDK9P50750 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CDK9P50750 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.85■■□□□ 1.41
CDK9P50750 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDK9P50750 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDK9P50750 MIR7108-201ENST00000614319 87 ntBASIC23.84■■□□□ 1.41
CDK9P50750 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.84■■□□□ 1.41
CDK9P50750 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CDK9P50750 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms