Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC29.4■■■□□ 2.3
CCDC196A0A1B0GTZ2 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CCDC196A0A1B0GTZ2 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CCDC196A0A1B0GTZ2 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CCDC196A0A1B0GTZ2 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC29.38■■■□□ 2.29
CCDC196A0A1B0GTZ2 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
CCDC196A0A1B0GTZ2 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC29.38■■■□□ 2.29
CCDC196A0A1B0GTZ2 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
CCDC196A0A1B0GTZ2 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
CCDC196A0A1B0GTZ2 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC29.37■■■□□ 2.29
CCDC196A0A1B0GTZ2 CR559946.2-201ENST00000623684 991 ntBASIC29.37■■■□□ 2.29
CCDC196A0A1B0GTZ2 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
CCDC196A0A1B0GTZ2 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
CCDC196A0A1B0GTZ2 MIR3648-2-201ENST00000581792 180 ntBASIC29.36■■■□□ 2.29
CCDC196A0A1B0GTZ2 MIR3648-1-201ENST00000615959 180 ntBASIC29.36■■■□□ 2.29
CCDC196A0A1B0GTZ2 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
CCDC196A0A1B0GTZ2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
CCDC196A0A1B0GTZ2 AC008813.1-201ENST00000536597 885 ntBASIC29.35■■■□□ 2.29
CCDC196A0A1B0GTZ2 GDI1-215ENST00000630693 786 ntTSL 4 BASIC29.35■■■□□ 2.29
CCDC196A0A1B0GTZ2 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
CCDC196A0A1B0GTZ2 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC29.34■■■□□ 2.29
CCDC196A0A1B0GTZ2 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC29.34■■■□□ 2.29
CCDC196A0A1B0GTZ2 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CCDC196A0A1B0GTZ2 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
CCDC196A0A1B0GTZ2 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC29.33■■■□□ 2.29
CCDC196A0A1B0GTZ2 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC29.33■■■□□ 2.29
CCDC196A0A1B0GTZ2 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
CCDC196A0A1B0GTZ2 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC29.32■■■□□ 2.28
CCDC196A0A1B0GTZ2 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CCDC196A0A1B0GTZ2 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC29.3■■■□□ 2.28
CCDC196A0A1B0GTZ2 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
CCDC196A0A1B0GTZ2 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CCDC196A0A1B0GTZ2 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CCDC196A0A1B0GTZ2 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
CCDC196A0A1B0GTZ2 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC29.29■■■□□ 2.28
CCDC196A0A1B0GTZ2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC29.29■■■□□ 2.28
CCDC196A0A1B0GTZ2 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CCDC196A0A1B0GTZ2 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
CCDC196A0A1B0GTZ2 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CCDC196A0A1B0GTZ2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
CCDC196A0A1B0GTZ2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC29.27■■■□□ 2.28
CCDC196A0A1B0GTZ2 AC016575.1-201ENST00000607026 382 ntBASIC29.27■■■□□ 2.28
CCDC196A0A1B0GTZ2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC29.26■■■□□ 2.28
CCDC196A0A1B0GTZ2 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
CCDC196A0A1B0GTZ2 SHF-208ENST00000560734 1731 ntTSL 3 BASIC29.26■■■□□ 2.27
CCDC196A0A1B0GTZ2 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CCDC196A0A1B0GTZ2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
CCDC196A0A1B0GTZ2 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC29.25■■■□□ 2.27
CCDC196A0A1B0GTZ2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CCDC196A0A1B0GTZ2 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC29.24■■■□□ 2.27
CCDC196A0A1B0GTZ2 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
CCDC196A0A1B0GTZ2 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC29.23■■■□□ 2.27
CCDC196A0A1B0GTZ2 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CCDC196A0A1B0GTZ2 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC29.22■■■□□ 2.27
CCDC196A0A1B0GTZ2 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CCDC196A0A1B0GTZ2 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC29.22■■■□□ 2.27
CCDC196A0A1B0GTZ2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC29.22■■■□□ 2.27
CCDC196A0A1B0GTZ2 AC148477.6-201ENST00000623746 465 ntBASIC29.2■■■□□ 2.26
CCDC196A0A1B0GTZ2 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC29.2■■■□□ 2.26
CCDC196A0A1B0GTZ2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
CCDC196A0A1B0GTZ2 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
CCDC196A0A1B0GTZ2 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC29.19■■■□□ 2.26
CCDC196A0A1B0GTZ2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CCDC196A0A1B0GTZ2 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC29.19■■■□□ 2.26
CCDC196A0A1B0GTZ2 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC29.18■■■□□ 2.26
CCDC196A0A1B0GTZ2 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CCDC196A0A1B0GTZ2 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CCDC196A0A1B0GTZ2 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC29.17■■■□□ 2.26
CCDC196A0A1B0GTZ2 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC29.16■■■□□ 2.26
CCDC196A0A1B0GTZ2 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC29.16■■■□□ 2.26
CCDC196A0A1B0GTZ2 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC29.16■■■□□ 2.26
CCDC196A0A1B0GTZ2 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC29.16■■■□□ 2.26
CCDC196A0A1B0GTZ2 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CCDC196A0A1B0GTZ2 HLA-V-202ENST00000446817 847 ntBASIC29.15■■■□□ 2.26
CCDC196A0A1B0GTZ2 CHST11-203ENST00000547956 936 ntTSL 2 BASIC29.15■■■□□ 2.26
CCDC196A0A1B0GTZ2 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC29.15■■■□□ 2.26
CCDC196A0A1B0GTZ2 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CCDC196A0A1B0GTZ2 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC29.14■■■□□ 2.26
CCDC196A0A1B0GTZ2 METRNL-202ENST00000570778 967 ntTSL 5 BASIC29.14■■■□□ 2.26
CCDC196A0A1B0GTZ2 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC29.13■■■□□ 2.25
CCDC196A0A1B0GTZ2 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC29.13■■■□□ 2.25
CCDC196A0A1B0GTZ2 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
CCDC196A0A1B0GTZ2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC29.13■■■□□ 2.25
CCDC196A0A1B0GTZ2 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC29.13■■■□□ 2.25
CCDC196A0A1B0GTZ2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
CCDC196A0A1B0GTZ2 MIR219A2-201ENST00000608502 1504 ntBASIC29.12■■■□□ 2.25
CCDC196A0A1B0GTZ2 MIR639-201ENST00000384974 98 ntBASIC29.12■■■□□ 2.25
CCDC196A0A1B0GTZ2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC29.12■■■□□ 2.25
CCDC196A0A1B0GTZ2 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
CCDC196A0A1B0GTZ2 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CCDC196A0A1B0GTZ2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC29.11■■■□□ 2.25
CCDC196A0A1B0GTZ2 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
CCDC196A0A1B0GTZ2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC29.1■■■□□ 2.25
CCDC196A0A1B0GTZ2 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC29.1■■■□□ 2.25
CCDC196A0A1B0GTZ2 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC29.1■■■□□ 2.25
CCDC196A0A1B0GTZ2 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
CCDC196A0A1B0GTZ2 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC29.09■■■□□ 2.25
CCDC196A0A1B0GTZ2 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CCDC196A0A1B0GTZ2 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC29.09■■■□□ 2.25
CCDC196A0A1B0GTZ2 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC29.09■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms