RNA–Protein interactions for RNA: YKL145W

RPT1, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT1, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT1YKL145W DRS1P32892 752 aaKnown RBP12.4□□□□□ -0.42
RPT1YKL145W MTC1P47018 478 aaKnown RBP11.42□□□□□ -0.58
RPT1YKL145W TFA1P36100 482 aa11.21□□□□□ -0.61
RPT1YKL145W BFR2Q06631 534 aaKnown RBP11.16□□□□□ -0.62
RPT1YKL145W RQC2Q12532 1038 aaKnown RBP10.42□□□□□ -0.74
RPT1YKL145W AVT3P36062 692 aa10.41□□□□□ -0.74
RPT1YKL145W DIP2Q12220 943 aaPredicted RBP10.23□□□□□ -0.77
RPT1YKL145W SGS1P35187 1447 aa10.01□□□□□ -0.81
RPT1YKL145W MON2P48563 1636 aaPredicted RBP9.9□□□□□ -0.82
RPT1YKL145W INO80P53115 1489 aa9.86□□□□□ -0.83
RPT1YKL145W TCB3Q03640 1545 aaKnown RBP9.83□□□□□ -0.84
RPT1YKL145W TAF7Q05021 590 aa9.8□□□□□ -0.84
RPT1YKL145W TY1B-DR4Q07793 1604 aa9.76□□□□□ -0.85
RPT1YKL145W SWR1Q05471 1514 aa9.64□□□□□ -0.87
RPT1YKL145W DMA1P38823 416 aa9.57□□□□□ -0.88
RPT1YKL145W HSL1P34244 1518 aa9.55□□□□□ -0.88
RPT1YKL145W SPT6P23615 1451 aaKnown RBP9.51□□□□□ -0.89
RPT1YKL145W FAP1P53971 965 aa9.48□□□□□ -0.89
RPT1YKL145W SSN2P38931 1420 aa9.48□□□□□ -0.89
RPT1YKL145W SPA2P23201 1466 aaKnown RBP9.45□□□□□ -0.9
RPT1YKL145W DNA2P38859 1522 aa9.43□□□□□ -0.9
RPT1YKL145W RSE1Q04693 1361 aaKnown RBP9.38□□□□□ -0.91
RPT1YKL145W HIR3P47171 1648 aa9.35□□□□□ -0.91
RPT1YKL145W KOG1P38873 1557 aa9.35□□□□□ -0.91
RPT1YKL145W XRN1P22147 1528 aaKnown RBP9.26□□□□□ -0.93
RPT1YKL145W LEO1P38439 464 aa9.24□□□□□ -0.93
RPT1YKL145W REV3P14284 1504 aa9.13□□□□□ -0.95
RPT1YKL145W PTP3P40048 928 aa9.11□□□□□ -0.95
RPT1YKL145W THO2P53552 1597 aaKnown RBP9.1□□□□□ -0.95
RPT1YKL145W BUD4P47136 1447 aa9.09□□□□□ -0.95
RPT1YKL145W ECM5Q03214 1411 aa9.07□□□□□ -0.96
RPT1YKL145W SIN3P22579 1536 aa9.04□□□□□ -0.96
RPT1YKL145W TAF2P23255 1407 aa9.01□□□□□ -0.97
RPT1YKL145W ISW2Q08773 1120 aa9.01□□□□□ -0.97
RPT1YKL145W SSK2P53599 1579 aa9□□□□□ -0.97
RPT1YKL145W PRY3P47033 881 aa8.98□□□□□ -0.97
RPT1YKL145W ATG2P53855 1592 aa8.98□□□□□ -0.97
RPT1YKL145W RPL17AP05740 184 aaKnown RBP8.97□□□□□ -0.97
RPT1YKL145W RPL17BP46990 184 aaKnown RBP8.97□□□□□ -0.97
RPT1YKL145W MDS3P53094 1487 aa8.97□□□□□ -0.97
RPT1YKL145W PEP1P32319 1579 aa8.92□□□□□ -0.98
RPT1YKL145W ESP1Q03018 1630 aa8.92□□□□□ -0.98
RPT1YKL145W SKI3P17883 1432 aaKnown RBP8.9□□□□□ -0.98
RPT1YKL145W RPG1P38249 964 aaKnown RBP8.88□□□□□ -0.99
RPT1YKL145W LEU3P08638 886 aa8.88□□□□□ -0.99
RPT1YKL145W SSP1P38871 571 aa8.87□□□□□ -0.99
RPT1YKL145W MYO2P19524 1574 aaKnown RBP8.87□□□□□ -0.99
RPT1YKL145W RIM101P33400 625 aa8.85□□□□□ -0.99
RPT1YKL145W SAS10Q12136 610 aaPredicted RBP8.8□□□□□ -1
RPT1YKL145W SPT21P35209 758 aa8.8□□□□□ -1
RPT1YKL145W YPK9Q12697 1472 aa8.78□□□□□ -1
RPT1YKL145W REB1P21538 810 aa8.73□□□□□ -1.01
RPT1YKL145W SCC2Q04002 1493 aa8.73□□□□□ -1.01
RPT1YKL145W BPT1P14772 1559 aa8.69□□□□□ -1.02
RPT1YKL145W UFD4P33202 1483 aa8.69□□□□□ -1.02
RPT1YKL145W RPO31P04051 1460 aa8.66□□□□□ -1.02
RPT1YKL145W POL1P13382 1468 aa8.66□□□□□ -1.02
RPT1YKL145W RKR1Q04781 1562 aa8.63□□□□□ -1.03
RPT1YKL145W STU1P38198 1513 aa8.63□□□□□ -1.03
RPT1YKL145W OXP1P28273 1286 aa8.63□□□□□ -1.03
RPT1YKL145W PRI1P10363 409 aa8.62□□□□□ -1.03
RPT1YKL145W YCF1P39109 1515 aaKnown RBP8.61□□□□□ -1.03
RPT1YKL145W TY2B-LR1P0C2J3 1770 aa8.6□□□□□ -1.03
RPT1YKL145W TY2B-FP0CX63 1770 aa8.6□□□□□ -1.03
RPT1YKL145W TY2B-GR2P0CX64 1770 aa8.6□□□□□ -1.03
RPT1YKL145W TY2B-CP25384 1770 aa8.6□□□□□ -1.03
RPT1YKL145W TY2B-DR2Q03494 1770 aa8.6□□□□□ -1.03
RPT1YKL145W TY1B-DR1Q03855 1755 aa8.6□□□□□ -1.03
RPT1YKL145W TY2B-DR3Q07791 1770 aaKnown RBP8.6□□□□□ -1.03
RPT1YKL145W TY2B-OR1Q12113 1770 aa8.6□□□□□ -1.03
RPT1YKL145W TY2B-DR1Q12472 1770 aa8.6□□□□□ -1.03
RPT1YKL145W TY2B-OR2Q12501 1770 aa8.6□□□□□ -1.03
RPT1YKL145W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.6□□□□□ -1.03not detected
RPT1YKL145W TOP2P06786 1428 aaKnown RBP8.57□□□□□ -1.04
RPT1YKL145W YAH1Q12184 172 aaKnown RBP8.56□□□□□ -1.04
RPT1YKL145W YOR1P53049 1477 aa8.56□□□□□ -1.04
RPT1YKL145W YCK3P39962 524 aa8.54□□□□□ -1.04
RPT1YKL145W DMA2P53924 522 aa8.54□□□□□ -1.04
RPT1YKL145W YLR271WQ06152 274 aa8.54□□□□□ -1.04
RPT1YKL145W TY1B-DR3Q99231 1755 aa8.53□□□□□ -1.04
RPT1YKL145W TY2B-BQ12491 1770 aa8.52□□□□□ -1.05
RPT1YKL145W SMC4Q12267 1418 aa8.51□□□□□ -1.05
RPT1YKL145W RPN1P38764 993 aaKnown RBP8.51□□□□□ -1.05
RPT1YKL145W CDC25P04821 1589 aa8.5□□□□□ -1.05
RPT1YKL145W TY1B-BRQ12193 1756 aa8.49□□□□□ -1.05
RPT1YKL145W TY1B-GR3Q12316 1755 aa8.49□□□□□ -1.05
RPT1YKL145W TY1B-ORQ92393 1755 aa8.49□□□□□ -1.05
RPT1YKL145W AAD16Q02895 342 aa8.48□□□□□ -1.05
RPT1YKL145W CHD1P32657 1468 aa8.48□□□□□ -1.05
RPT1YKL145W YTA7P40340 1379 aa8.47□□□□□ -1.05
RPT1YKL145W TY1B-HO13535 1793 aa8.46□□□□□ -1.06
RPT1YKL145W TY1B-DR5P0C2I2 1755 aa8.46□□□□□ -1.06
RPT1YKL145W TY1B-DR6P0C2I3 1755 aa8.46□□□□□ -1.06
RPT1YKL145W TY1B-LR2P0C2I5 1755 aa8.46□□□□□ -1.06
RPT1YKL145W TY1B-LR3P0C2I6 1755 aaKnown RBP8.46□□□□□ -1.06
RPT1YKL145W TY1B-PR1P0C2I9 1755 aaKnown RBP8.46□□□□□ -1.06
RPT1YKL145W TY1B-PR2P0C2J0 1756 aa8.46□□□□□ -1.06
RPT1YKL145W TY1B-PR3P0C2J1 1755 aaKnown RBP8.46□□□□□ -1.06
RPT1YKL145W TY1B-JR1P47098 1755 aa8.46□□□□□ -1.06
RPT1YKL145W TY1B-ML2Q03434 1755 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms