Protein–RNA interactions for Protein: Q99231

TY1B-DR3, Transposon Ty1-DR3 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-DR3Q99231 YML009W-BYML009W-B 477 nt33.22■■■□□ 2.91
TY1B-DR3Q99231 NOP1YDL014W 984 nt31.78■■■□□ 2.68
TY1B-DR3Q99231 NSR1YGR159C 1245 nt31.63■■■□□ 2.65
TY1B-DR3Q99231 YKL036CYKL036C 393 nt30.5■■■□□ 2.47
TY1B-DR3Q99231 YJL027CYJL027C 417 nt28.57■■■□□ 2.16
TY1B-DR3Q99231 SCS3YGL126W 1143 nt28.45■■■□□ 2.14
TY1B-DR3Q99231 Q0297Q0297 156 nt28.39■■■□□ 2.14
TY1B-DR3Q99231 SRX1YKL086W 384 nt28.3■■■□□ 2.12
TY1B-DR3Q99231 MDJ1YFL016C 1536 nt28.15■■■□□ 2.1
TY1B-DR3Q99231 YCR051WYCR051W 669 nt26.96■■□□□ 1.91
TY1B-DR3Q99231 YOL085CYOL085C 342 nt26.23■■□□□ 1.79
TY1B-DR3Q99231 PKP1YIL042C 1185 nt26.22■■□□□ 1.79
TY1B-DR3Q99231 SCJ1YMR214W 1134 nt25.54■■□□□ 1.68
TY1B-DR3Q99231 RPP1BYDL130W 321 nt25.44■■□□□ 1.66
TY1B-DR3Q99231 ATS1YAL020C 1002 nt25.28■■□□□ 1.64
TY1B-DR3Q99231 TRN1tP(UGG)A 72 nt25.26■■□□□ 1.63
TY1B-DR3Q99231 SUF9tP(UGG)F 72 nt25.26■■□□□ 1.63
TY1B-DR3Q99231 SUF8tP(UGG)H 72 nt25.26■■□□□ 1.63
TY1B-DR3Q99231 tP(UGG)LtP(UGG)L 72 nt25.26■■□□□ 1.63
TY1B-DR3Q99231 SUF7tP(UGG)M 72 nt25.26■■□□□ 1.63
TY1B-DR3Q99231 tP(UGG)N1tP(UGG)N1 72 nt25.26■■□□□ 1.63
TY1B-DR3Q99231 tP(UGG)N2tP(UGG)N2 72 nt25.26■■□□□ 1.63
TY1B-DR3Q99231 tP(UGG)O1tP(UGG)O1 72 nt25.26■■□□□ 1.63
TY1B-DR3Q99231 SUF11tP(UGG)O2 72 nt25.26■■□□□ 1.63
TY1B-DR3Q99231 DBP2YNL112W 1641 nt25.08■■□□□ 1.61
TY1B-DR3Q99231 CCC1YLR220W 969 nt24.93■■□□□ 1.58
TY1B-DR3Q99231 PET122YER153C 765 nt24.59■■□□□ 1.53
TY1B-DR3Q99231 SCR1SCR1 522 nt24.16■■□□□ 1.46
TY1B-DR3Q99231 tP(UGG)O3tP(UGG)O3 72 nt24■■□□□ 1.43
TY1B-DR3Q99231 RRN5YLR141W 1092 nt23.7■■□□□ 1.38
TY1B-DR3Q99231 RTC3YHR087W 336 nt23.66■■□□□ 1.38
TY1B-DR3Q99231 RSB1YOR049C 1065 nt23.64■■□□□ 1.37
TY1B-DR3Q99231 RVS167YDR388W 1449 nt23.37■■□□□ 1.33
TY1B-DR3Q99231 YER088W-BYER088W-B 147 nt23.27■■□□□ 1.32
TY1B-DR3Q99231 PST2YDR032C 597 nt23.26■■□□□ 1.31
TY1B-DR3Q99231 YBR190WYBR190W 312 nt23.22■■□□□ 1.31
TY1B-DR3Q99231 YDJ1YNL064C 1230 nt22.95■■□□□ 1.26
TY1B-DR3Q99231 YKL097CYKL097C 411 nt22.94■■□□□ 1.26
TY1B-DR3Q99231 SHR5YOL110W 714 nt22.86■■□□□ 1.25
TY1B-DR3Q99231 GAR1YHR089C 618 nt22.6■■□□□ 1.21
TY1B-DR3Q99231 SHU1YHL006C 453 nt22.45■■□□□ 1.19
TY1B-DR3Q99231 DEP1YAL013W 1218 nt22.35■■□□□ 1.17
TY1B-DR3Q99231 YAL037C-BYAL037C-B 975 nt22.11■■□□□ 1.13
TY1B-DR3Q99231 YOR139CYOR139C 393 nt22.1■■□□□ 1.13
TY1B-DR3Q99231 URN1YPR152C 1398 nt21.97■■□□□ 1.11
TY1B-DR3Q99231 TIR1YER011W 765 nt21.73■■□□□ 1.07
TY1B-DR3Q99231 SRB2YHR041C 633 nt21.66■■□□□ 1.06
TY1B-DR3Q99231 MNP1YGL068W 585 nt21.55■■□□□ 1.04
TY1B-DR3Q99231 YNL208WYNL208W 600 nt21.53■■□□□ 1.04
TY1B-DR3Q99231 NPL3YDR432W 1245 nt21.51■■□□□ 1.03
TY1B-DR3Q99231 SSA1YAL005C 1929 nt21.45■■□□□ 1.02
TY1B-DR3Q99231 RPN10YHR200W 807 nt21.39■■□□□ 1.01
TY1B-DR3Q99231 OPI9YLR338W 858 nt21.23■□□□□ 0.99
TY1B-DR3Q99231 WWM1YFL010C 636 nt21.2■□□□□ 0.98
TY1B-DR3Q99231 SAH1YER043C 1350 nt21.17■□□□□ 0.98
TY1B-DR3Q99231 YJR120WYJR120W 351 nt21.13■□□□□ 0.97
TY1B-DR3Q99231 HOM6YJR139C 1080 nt21.1■□□□□ 0.97
TY1B-DR3Q99231 YOL037CYOL037C 354 nt21■□□□□ 0.95
TY1B-DR3Q99231 YGR021WYGR021W 873 nt20.92■□□□□ 0.94
TY1B-DR3Q99231 YJR018WYJR018W 363 nt20.85■□□□□ 0.93
TY1B-DR3Q99231 tM(CAU)CtM(CAU)C 72 nt20.8■□□□□ 0.92
TY1B-DR3Q99231 IMT4tM(CAU)E 72 nt20.8■□□□□ 0.92
TY1B-DR3Q99231 IMT3tM(CAU)J3 72 nt20.8■□□□□ 0.92
TY1B-DR3Q99231 IMT1tM(CAU)O1 72 nt20.8■□□□□ 0.92
TY1B-DR3Q99231 IMT2tM(CAU)P 72 nt20.8■□□□□ 0.92
TY1B-DR3Q99231 ARE1YCR048W 1833 nt20.73■□□□□ 0.91
TY1B-DR3Q99231 RKM5YLR137W 1104 nt20.71■□□□□ 0.91
TY1B-DR3Q99231 PUT4YOR348C 1884 nt20.7■□□□□ 0.9
TY1B-DR3Q99231 YHR049C-AYHR049C-A 297 nt20.69■□□□□ 0.9
TY1B-DR3Q99231 SSA3YBL075C 1950 nt20.63■□□□□ 0.89
TY1B-DR3Q99231 YFL021C-AYFL021C-A 855 nt20.54■□□□□ 0.88
TY1B-DR3Q99231 PUS2YGL063W 1113 nt20.54■□□□□ 0.88
TY1B-DR3Q99231 PUN1YLR414C 792 nt20.53■□□□□ 0.88
TY1B-DR3Q99231 MOT3YMR070W 1473 nt20.51■□□□□ 0.87
TY1B-DR3Q99231 RPP2BYDR382W 333 nt20.42■□□□□ 0.86
TY1B-DR3Q99231 YLR281CYLR281C 468 nt20.36■□□□□ 0.85
TY1B-DR3Q99231 BDH2YAL061W 1254 nt20.34■□□□□ 0.85
TY1B-DR3Q99231 WHI5YOR083W 888 nt20.29■□□□□ 0.84
TY1B-DR3Q99231 YLR236CYLR236C 324 nt20.29■□□□□ 0.84
TY1B-DR3Q99231 PTC2YER089C 1395 nt20.24■□□□□ 0.83
TY1B-DR3Q99231 POA1YBR022W 534 nt20.18■□□□□ 0.82
TY1B-DR3Q99231 YPR011CYPR011C 981 nt20.18■□□□□ 0.82
TY1B-DR3Q99231 FMP45YDL222C 930 nt20.17■□□□□ 0.82
TY1B-DR3Q99231 BUD23YCR047C 828 nt20.14■□□□□ 0.81
TY1B-DR3Q99231 BSC6YOL137W 1494 nt20.12■□□□□ 0.81
TY1B-DR3Q99231 FIS1YIL065C 468 nt20.08■□□□□ 0.8
TY1B-DR3Q99231 YBL100CYBL100C 315 nt20.02■□□□□ 0.8
TY1B-DR3Q99231 DSK2YMR276W 1122 nt19.94■□□□□ 0.78
TY1B-DR3Q99231 PHO4YFR034C 939 nt19.85■□□□□ 0.77
TY1B-DR3Q99231 LPX1YOR084W 1164 nt19.83■□□□□ 0.77
TY1B-DR3Q99231 YLR154C-GYLR154C-G 150 nt19.83■□□□□ 0.76
TY1B-DR3Q99231 NAB2YGL122C 1578 nt19.82■□□□□ 0.76
TY1B-DR3Q99231 FPR4YLR449W 1179 nt19.82■□□□□ 0.76
TY1B-DR3Q99231 LSM3YLR438C-A 270 nt19.8■□□□□ 0.76
TY1B-DR3Q99231 SPP1YPL138C 1062 nt19.73■□□□□ 0.75
TY1B-DR3Q99231 YCH1YGR203W 447 nt19.71■□□□□ 0.75
TY1B-DR3Q99231 RTG1YOL067C 534 nt19.68■□□□□ 0.74
TY1B-DR3Q99231 DAL1YIR027C 1383 nt19.68■□□□□ 0.74
TY1B-DR3Q99231 UBX6YJL048C 1191 nt19.63■□□□□ 0.73
TY1B-DR3Q99231 MRPL8YJL063C 717 nt19.62■□□□□ 0.73
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms