RNA–Protein interactions for RNA: ENST00000591284.2

AP3D1-209, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 5

Gene AP3D1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-209ENST00000591284 DDX3XO00571 662 aaKnown RBP eCLIP19.23■□□□□ 0.673e-59■■■■□ 24.4
AP3D1-209ENST00000591284 GTF2F1P35269 517 aaKnown RBP eCLIP21.35■■□□□ 1.011e-14■■■■■ 36.8
AP3D1-209ENST00000591284 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21■□□□□ 0.959e-13■■■■□ 19.6
AP3D1-209ENST00000591284 XRN2Q9H0D6 950 aaKnown RBP eCLIP23■■□□□ 1.275e-10■□□□□ 9
AP3D1-209ENST00000591284 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.12■□□□□ 0.499e-10■■□□□ 14.4
AP3D1-209ENST00000591284 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.59■■□□□ 1.211e-9■□□□□ 11
AP3D1-209ENST00000591284 AATFQ9NY61 560 aaKnown RBP eCLIP23.34■■□□□ 1.331e-9■■■□□ 14.8
AP3D1-209ENST00000591284 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.2■□□□□ 0.822e-9■■■■■ 75.8
AP3D1-209ENST00000591284 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.7■□□□□ 0.742e-9■■■□□ 17.4
AP3D1-209ENST00000591284 HNRNPKP61978 463 aaKnown RBP eCLIP19.44■□□□□ 0.73e-9■■□□□ 12.1
AP3D1-209ENST00000591284 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.82■□□□□ 0.764e-9■■□□□ 12.6
AP3D1-209ENST00000591284 ZNF622Q969S3 477 aaKnown RBP eCLIP25.19■■□□□ 1.624e-9■■□□□ 11.4
AP3D1-209ENST00000591284 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.23■■□□□ 1.154e-9■□□□□ 9.8
AP3D1-209ENST00000591284 SFPQP23246 707 aaKnown RBP eCLIP21.46■■□□□ 1.038e-9■□□□□ 9.6
AP3D1-209ENST00000591284 PPIGQ13427 754 aaKnown RBP eCLIP22.36■■□□□ 1.179e-9■□□□□ 10.8
AP3D1-209ENST00000591284 SF3B1O75533 1304 aaKnown RBP eCLIP21.08■□□□□ 0.973e-8■■■■■ 143.5
AP3D1-209ENST00000591284 EFTUD2Q15029 972 aaKnown RBP eCLIP17.9■□□□□ 0.464e-8■■■■□ 22.7
AP3D1-209ENST00000591284 SMNDC1O75940 238 aaKnown RBP eCLIP17.28■□□□□ 0.365e-8■■■□□ 17
AP3D1-209ENST00000591284 QKIQ96PU8 341 aaKnown RBP eCLIP18.82■□□□□ 0.65e-8■■■□□ 14.9
AP3D1-209ENST00000591284 ILF3Q12906 894 aaKnown RBP eCLIP19.14■□□□□ 0.656e-8■□□□□ 11.2
AP3D1-209ENST00000591284 FMR1Q06787 632 aaKnown RBP eCLIP24.26■■□□□ 1.477e-8■■■□□ 18.1
AP3D1-209ENST00000591284 SF3A3Q12874 501 aaKnown RBP eCLIP16.33■□□□□ 0.27e-8■■□□□ 13.8
AP3D1-209ENST00000591284 AARSP49588 968 aaKnown RBP eCLIP20.73■□□□□ 0.919e-8■■■■□ 21.8
AP3D1-209ENST00000591284 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.52■□□□□ 0.231e-7■■□□□ 14.5
AP3D1-209ENST00000591284 PUM1Q14671 1186 aaKnown RBP eCLIP20.4■□□□□ 0.861e-7■■■■■ 30.7
AP3D1-209ENST00000591284 FXR2P51116 673 aaKnown RBP eCLIP21.13■□□□□ 0.972e-7■■■■□ 22
AP3D1-209ENST00000591284 RBFOX2O43251 390 aaKnown RBP eCLIP14.56□□□□□ -0.082e-7■■■□□ 15
AP3D1-209ENST00000591284 PCBP2Q15366 365 aaKnown RBP eCLIP17.73■□□□□ 0.432e-7■■■■■ 31.8
AP3D1-209ENST00000591284 RBM22Q9NW64 420 aaKnown RBP eCLIP19.08■□□□□ 0.642e-7■■■■□ 23.8
AP3D1-209ENST00000591284 AQRO60306 1485 aaKnown RBP eCLIP34.2■■■■□ 3.063e-7■■■■□ 24.3
AP3D1-209ENST00000591284 LARP4Q71RC2 724 aaKnown RBP eCLIP17.42■□□□□ 0.383e-7■■■■■ 27.6
AP3D1-209ENST00000591284 FTOQ9C0B1 505 aaKnown RBP eCLIP22.09■■□□□ 1.136e-7■□□□□ 10.6
AP3D1-209ENST00000591284 NONOQ15233 471 aaKnown RBP eCLIP21.56■■□□□ 1.047e-7■■■■□ 19.6
AP3D1-209ENST00000591284 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.16■■□□□ 1.37e-7■■■□□ 16.6
AP3D1-209ENST00000591284 LSM11P83369 360 aaKnown RBP eCLIP16.63■□□□□ 0.257e-7■□□□□ 8.4
AP3D1-209ENST00000591284 PRPF4O43172 522 aaKnown RBP eCLIP18.33■□□□□ 0.528e-7■■□□□ 11.6
AP3D1-209ENST00000591284 EWSR1Q01844 656 aaKnown RBP eCLIP14.01□□□□□ -0.178e-7■■■■□ 21.2
AP3D1-209ENST00000591284 SF3B4Q15427 424 aaKnown RBP eCLIP17.64■□□□□ 0.418e-7■□□□□ 9.6
AP3D1-209ENST00000591284 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.22■□□□□ 0.679e-7■□□□□ 10
AP3D1-209ENST00000591284 TIA1P31483 386 aaKnown RBP eCLIP17.45■□□□□ 0.389e-7■■■□□ 15.7
AP3D1-209ENST00000591284 HNRNPMP52272 730 aaKnown RBP eCLIP30.4■■■□□ 2.461e-6■■■■■ 39.5
AP3D1-209ENST00000591284 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.4■□□□□ 0.381e-6■■■□□ 18.1
AP3D1-209ENST00000591284 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.5■■■□□ 2.312e-6■■□□□ 13.4
AP3D1-209ENST00000591284 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.52■■■□□ 2.322e-6■■□□□ 14.2
AP3D1-209ENST00000591284 NKRFO15226 690 aaKnown RBP eCLIP22.34■■□□□ 1.173e-6■■■□□ 18.4
AP3D1-209ENST00000591284 NCBP2P52298 156 aaKnown RBP eCLIP17.4■□□□□ 0.383e-6■■□□□ 14.5
AP3D1-209ENST00000591284 FUSP35637 526 aaKnown RBP eCLIP12.81□□□□□ -0.363e-6■□□□□ 10.3
AP3D1-209ENST00000591284 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.17■■■□□ 2.583e-6■■■□□ 17
AP3D1-209ENST00000591284 YWHAGP61981 247 aaKnown RBP eCLIP20.05■□□□□ 0.83e-6■□□□□ 9.4
AP3D1-209ENST00000591284 FKBP4Q02790 459 aaKnown RBP eCLIP24.92■■□□□ 1.584e-6■■■□□ 18
AP3D1-209ENST00000591284 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.87■□□□□ 0.774e-6■■■■■ 28.8
AP3D1-209ENST00000591284 RBM15Q96T37 977 aaKnown RBP eCLIP19.18■□□□□ 0.664e-6■□□□□ 8.6
AP3D1-209ENST00000591284 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.65■□□□□ 0.584e-6■■■■■ 30.2
AP3D1-209ENST00000591284 WDR43Q15061 677 aaKnown RBP eCLIP25.11■■□□□ 1.615e-6■■□□□ 12.1
AP3D1-209ENST00000591284 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.6■■□□□ 1.216e-6■■■□□ 14.6
AP3D1-209ENST00000591284 WRNQ14191 1432 aaPredicted RBP eCLIP33.79■■■■□ 36e-6■□□□□ 9
AP3D1-209ENST00000591284 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.03■□□□□ 0.328e-6■□□□□ 10.8
Retrieved 57 of 57 RNA–protein pairs in 20.3 ms