RNA–Protein interactions for RNA: ENST00000591284.2

AP3D1-209, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 5

Gene AP3D1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-209ENST00000591284 NISCHQ9Y2I1 1504 aa47.19■■■■■ 5.14
AP3D1-209ENST00000591284 CCDC180Q9P1Z9 1646 aa42.33■■■■■ 4.37
AP3D1-209ENST00000591284 ABCC9O60706 1549 aa41.96■■■■■ 4.31
AP3D1-209ENST00000591284 RB1CC1Q8TDY2 1594 aa40.19■■■■■ 4.02
AP3D1-209ENST00000591284 NACADO15069 1562 aa39.97■■■■□ 3.99
AP3D1-209ENST00000591284 DCAF8L2P0C7V8 631 aa39.81■■■■□ 3.96
AP3D1-209ENST00000591284 MYO15BQ96JP2 1530 aa39.51■■■■□ 3.92
AP3D1-209ENST00000591284 ZCCHC6Q5VYS8 1495 aaKnown RBP39.14■■■■□ 3.86
AP3D1-209ENST00000591284 UNC13AQ9UPW8 1703 aa39.12■■■■□ 3.85
AP3D1-209ENST00000591284 PABPN1Q86U42 306 aaKnown RBP eCLIP39.07■■■■□ 3.85
AP3D1-209ENST00000591284 DCAF1Q9Y4B6 1507 aa39.06■■■■□ 3.84
AP3D1-209ENST00000591284 DNAJC5BQ9UF47 199 aa38.98■■■■□ 3.83
AP3D1-209ENST00000591284 BICRAQ9NZM4 1560 aa38.8■■■■□ 3.8
AP3D1-209ENST00000591284 SHROOM4Q9ULL8 1493 aa38.58■■■■□ 3.77
AP3D1-209ENST00000591284 SCRIBQ14160 1630 aa38.47■■■■□ 3.75
AP3D1-209ENST00000591284 CC2D2AQ9P2K1 1620 aa37.94■■■■□ 3.66
AP3D1-209ENST00000591284 EIF4G1Q04637 1599 aaKnown RBP37.93■■■■□ 3.66
AP3D1-209ENST00000591284 CECR2Q9BXF3 1484 aa37.84■■■■□ 3.65
AP3D1-209ENST00000591284 NCAPD3P42695 1498 aa36.84■■■■□ 3.49
AP3D1-209ENST00000591284 SMARCA4P51532 1647 aa36.76■■■■□ 3.48
AP3D1-209ENST00000591284 SMARCA2P51531 1590 aa36.75■■■■□ 3.47
AP3D1-209ENST00000591284 ATAD2BQ9ULI0 1458 aa36.72■■■■□ 3.47
AP3D1-209ENST00000591284 BAZ1AQ9NRL2 1556 aaPredicted RBP36.7■■■■□ 3.46
AP3D1-209ENST00000591284 HMGXB3Q12766 1538 aa36.61■■■■□ 3.45
AP3D1-209ENST00000591284 BAZ1BQ9UIG0 1483 aaKnown RBP36.45■■■■□ 3.43
AP3D1-209ENST00000591284 PEG3Q9GZU2 1588 aa36.42■■■■□ 3.42
AP3D1-209ENST00000591284 ERCC6Q03468 1493 aa36.36■■■■□ 3.41
AP3D1-209ENST00000591284 MROH2BQ7Z745 1585 aa36.28■■■■□ 3.4
AP3D1-209ENST00000591284 CUX2O14529 1486 aa36.19■■■■□ 3.38
AP3D1-209ENST00000591284 NESP48681 1621 aa36.05■■■■□ 3.36
AP3D1-209ENST00000591284 LAMC3Q9Y6N6 1575 aa36.02■■■■□ 3.36
AP3D1-209ENST00000591284 WIZO95785 1651 aa35.88■■■■□ 3.33
AP3D1-209ENST00000591284 PDS5BQ9NTI5 1447 aa35.85■■■■□ 3.33
AP3D1-209ENST00000591284 DNAJC5Q9H3Z4 198 aa35.82■■■■□ 3.32
AP3D1-209ENST00000591284 CADPSQ9ULU8 1353 aa35.75■■■■□ 3.31
AP3D1-209ENST00000591284 THOC2Q8NI27 1593 aaKnown RBP35.68■■■■□ 3.3
AP3D1-209ENST00000591284 KIF21AQ7Z4S6 1674 aa35.66■■■■□ 3.3
AP3D1-209ENST00000591284 RSF1Q96T23 1441 aaPredicted RBP35.66■■■■□ 3.3
AP3D1-209ENST00000591284 TOP2AP11388 1531 aaKnown RBP35.52■■■■□ 3.28
AP3D1-209ENST00000591284 MRC2Q9UBG0 1479 aa35.45■■■■□ 3.27
AP3D1-209ENST00000591284 CEP164Q9UPV0 1460 aa35.39■■■■□ 3.26
AP3D1-209ENST00000591284 CFTRP13569 1480 aa35.36■■■■□ 3.25
AP3D1-209ENST00000591284 FANCD2Q9BXW9 1451 aa35.33■■■■□ 3.25
AP3D1-209ENST00000591284 WDR62O43379 1518 aa35.32■■■■□ 3.24
AP3D1-209ENST00000591284 PRDM2Q13029 1718 aa35.1■■■■□ 3.21
AP3D1-209ENST00000591284 CCDC88BA6NC98 1476 aa35.07■■■■□ 3.2
AP3D1-209ENST00000591284 URB2Q14146 1524 aaKnown RBP34.93■■■■□ 3.18
AP3D1-209ENST00000591284 ABCC8Q09428 1581 aa34.79■■■■□ 3.16
AP3D1-209ENST00000591284 IFT140Q96RY7 1462 aa34.67■■■■□ 3.14
AP3D1-209ENST00000591284 TOPBP1Q92547 1522 aa34.66■■■■□ 3.14
AP3D1-209ENST00000591284 OSCARQ8IYS5 282 aa34.62■■■■□ 3.13
AP3D1-209ENST00000591284 DNMBPQ6XZF7 1577 aa34.6■■■■□ 3.13
AP3D1-209ENST00000591284 ZNF608Q9ULD9 1512 aaPredicted RBP34.44■■■■□ 3.1
AP3D1-209ENST00000591284 TRIM41Q8WV44 630 aa34.36■■■■□ 3.09
AP3D1-209ENST00000591284 SUPT5HO00267 1087 aaKnown RBP34.34■■■■□ 3.09
AP3D1-209ENST00000591284 EIF4G3O43432 1585 aaKnown RBP34.33■■■■□ 3.09
AP3D1-209ENST00000591284 POLA1P09884 1462 aaPredicted RBP34.31■■■■□ 3.08
AP3D1-209ENST00000591284 TARBP1Q13395 1621 aaKnown RBP34.3■■■■□ 3.08
AP3D1-209ENST00000591284 SOGA1O94964 1423 aa34.22■■■■□ 3.07
AP3D1-209ENST00000591284 AQRO60306 1485 aaKnown RBP eCLIP34.2■■■■□ 3.063e-7■■■■□ 24.3
AP3D1-209ENST00000591284 WDR97A6NE52 1622 aa34.15■■■■□ 3.06
AP3D1-209ENST00000591284 FGD5Q6ZNL6 1462 aa34.14■■■■□ 3.06
AP3D1-209ENST00000591284 RAD54L2Q9Y4B4 1467 aa34.12■■■■□ 3.05
AP3D1-209ENST00000591284 CUX1P39880 1505 aa34.09■■■■□ 3.05
AP3D1-209ENST00000591284 FBLN2P98095 1184 aa34.06■■■■□ 3.04
AP3D1-209ENST00000591284 TDRD9Q8NDG6 1382 aaKnown RBP34.06■■■■□ 3.04
AP3D1-209ENST00000591284 CHD1O14646 1710 aa34.04■■■■□ 3.04
AP3D1-209ENST00000591284 RIMBP3CA6NJZ7 1639 aa34■■■■□ 3.03
AP3D1-209ENST00000591284 RIMBP3BA6NNM3 1639 aa34■■■■□ 3.03
AP3D1-209ENST00000591284 RIMBP3Q9UFD9 1639 aa34■■■■□ 3.03
AP3D1-209ENST00000591284 ARHGEF11O15085 1522 aa33.94■■■■□ 3.02
AP3D1-209ENST00000591284 GRIN2BQ13224 1484 aa33.92■■■■□ 3.02
AP3D1-209ENST00000591284 MAGI1Q96QZ7 1491 aaPredicted RBP33.91■■■■□ 3.02
AP3D1-209ENST00000591284 SNAPC4Q5SXM2 1469 aa33.89■■■■□ 3.02
AP3D1-209ENST00000591284 CHMP7Q8WUX9 453 aaPredicted RBP33.88■■■■□ 3.01
AP3D1-209ENST00000591284 GAPVD1Q14C86 1478 aa33.81■■■■□ 3
AP3D1-209ENST00000591284 ABCA10Q8WWZ4 1543 aa33.8■■■■□ 3
AP3D1-209ENST00000591284 WRNQ14191 1432 aaPredicted RBP eCLIP33.79■■■■□ 36e-6■□□□□ 9
AP3D1-209ENST00000591284 SYNJ1O43426 1573 aa33.77■■■■□ 3
AP3D1-209ENST00000591284 SYNJ2O15056 1496 aa33.77■■■■□ 3
AP3D1-209ENST00000591284 PBRM1Q86U86 1689 aa33.75■■■□□ 2.99
AP3D1-209ENST00000591284 CYB5RLQ6IPT4 315 aa33.72■■■□□ 2.99
AP3D1-209ENST00000591284 TOP2BQ02880 1626 aa33.7■■■□□ 2.99
AP3D1-209ENST00000591284 ABCA5Q8WWZ7 1642 aa33.68■■■□□ 2.98
AP3D1-209ENST00000591284 BIVM-ERCC5R4GMW8 1640 aa33.68■■■□□ 2.98
AP3D1-209ENST00000591284 CLASP1Q7Z460 1538 aa33.63■■■□□ 2.97
AP3D1-209ENST00000591284 ARAP1Q96P48 1450 aa33.56■■■□□ 2.96
AP3D1-209ENST00000591284 GRIN2AQ12879 1464 aa33.44■■■□□ 2.94
AP3D1-209ENST00000591284 ERICH3Q5RHP9 1530 aa33.43■■■□□ 2.94
AP3D1-209ENST00000591284 FHAD1B1AJZ9 1412 aa33.42■■■□□ 2.94
AP3D1-209ENST00000591284 ADAMTS12P58397 1594 aa33.42■■■□□ 2.94
AP3D1-209ENST00000591284 TRHP20396 242 aaPredicted RBP33.34■■■□□ 2.93
AP3D1-209ENST00000591284 NUP160Q12769 1436 aa33.29■■■□□ 2.92
AP3D1-209ENST00000591284 CEP170Q5SW79 1584 aa33.23■■■□□ 2.91
AP3D1-209ENST00000591284 KIF27Q86VH2 1401 aa33.13■■■□□ 2.89
AP3D1-209ENST00000591284 SHROOM2Q13796 1616 aa33.11■■■□□ 2.89
AP3D1-209ENST00000591284 CUL7Q14999 1698 aa33.02■■■□□ 2.88
AP3D1-209ENST00000591284 JPH4Q96JJ6 628 aa33.02■■■□□ 2.88
AP3D1-209ENST00000591284 ERCC6L2Q5T890 1561 aa33.01■■■□□ 2.88
AP3D1-209ENST00000591284 PRG4Q92954 1404 aaPredicted RBP32.99■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms