RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C PKH3Q03306 898 aaPredicted RBP3.99□□□□□ -1.77
PRE4YFR050C SPT7P35177 1332 aa3.98□□□□□ -1.77
PRE4YFR050C AMS1P22855 1083 aa3.98□□□□□ -1.77
PRE4YFR050C TOS1P38288 455 aa3.98□□□□□ -1.77
PRE4YFR050C NYV1Q12255 253 aa3.98□□□□□ -1.77
PRE4YFR050C YIL177CP40434 1758 aa3.98□□□□□ -1.77
PRE4YFR050C YJL225CP40889 1758 aa3.98□□□□□ -1.77
PRE4YFR050C YRF1-3P0CX14 1859 aa3.97□□□□□ -1.77
PRE4YFR050C YRF1-7P0CX15 1859 aa3.97□□□□□ -1.77
PRE4YFR050C YRF1-6P53819 1859 aa3.97□□□□□ -1.77
PRE4YFR050C YKL222CP35995 705 aa3.97□□□□□ -1.77
PRE4YFR050C ERT1P38140 529 aa3.97□□□□□ -1.77
PRE4YFR050C PAC1P39946 494 aaKnown RBP3.97□□□□□ -1.77
PRE4YFR050C PUS6P53294 404 aa3.97□□□□□ -1.77
PRE4YFR050C TRM1P15565 570 aaKnown RBP3.96□□□□□ -1.78
PRE4YFR050C YEF3P16521 1044 aaKnown RBP3.96□□□□□ -1.78
PRE4YFR050C ARG8P18544 423 aa3.96□□□□□ -1.78
PRE4YFR050C YJU3P28321 313 aa3.96□□□□□ -1.78
PRE4YFR050C GUA1P38625 525 aaKnown RBP3.96□□□□□ -1.78
PRE4YFR050C KXD1P53158 218 aa3.96□□□□□ -1.78
PRE4YFR050C AGE1Q04412 482 aa3.96□□□□□ -1.78
PRE4YFR050C STB3Q12427 513 aa3.96□□□□□ -1.78
PRE4YFR050C KTR1P27810 393 aaKnown RBP3.95□□□□□ -1.78
PRE4YFR050C YDL206WQ12424 762 aa3.95□□□□□ -1.78
PRE4YFR050C HVG1P0CE11 249 aa3.94□□□□□ -1.78
PRE4YFR050C BRL1P38770 471 aa3.94□□□□□ -1.78
PRE4YFR050C BUB1P41695 1021 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
PRE4YFR050C BDP1P46678 594 aa3.94□□□□□ -1.78
PRE4YFR050C MRX12P47084 519 aa3.94□□□□□ -1.78
PRE4YFR050C ATG20Q07528 640 aa3.94□□□□□ -1.78
PRE4YFR050C ALR1Q08269 859 aa3.94□□□□□ -1.78
PRE4YFR050C TOP1P04786 769 aa3.93□□□□□ -1.78
PRE4YFR050C CST6P40535 587 aa3.93□□□□□ -1.78
PRE4YFR050C HGH1P48362 394 aaKnown RBP3.93□□□□□ -1.78
PRE4YFR050C RAD59Q12223 238 aa3.93□□□□□ -1.78
PRE4YFR050C CSF1Q12150 2958 aa3.93□□□□□ -1.78
PRE4YFR050C APC1P53886 1748 aa3.92□□□□□ -1.78
PRE4YFR050C FAS2P19097 1887 aaKnown RBP3.92□□□□□ -1.78
PRE4YFR050C NUP192P47054 1683 aa3.92□□□□□ -1.78
PRE4YFR050C PRP5P21372 849 aaPredicted RBP3.92□□□□□ -1.78
PRE4YFR050C RPA14P50106 137 aa3.92□□□□□ -1.78
PRE4YFR050C HPC2Q01448 625 aa3.92□□□□□ -1.78
PRE4YFR050C PDC1P06169 563 aaKnown RBP3.91□□□□□ -1.78
PRE4YFR050C MOT2P34909 587 aaKnown RBP3.91□□□□□ -1.78
PRE4YFR050C HXT10P43581 546 aa3.91□□□□□ -1.78
PRE4YFR050C MSB3P48566 633 aaPredicted RBP3.91□□□□□ -1.78
PRE4YFR050C MOD5P07884 428 aa3.9□□□□□ -1.79
PRE4YFR050C TFB3Q03290 321 aa3.9□□□□□ -1.79
PRE4YFR050C YPR097WQ06839 1073 aa3.9□□□□□ -1.79
PRE4YFR050C KIP2P28743 706 aa3.89□□□□□ -1.79
PRE4YFR050C RSC30P38781 883 aa3.89□□□□□ -1.79
PRE4YFR050C TPD3P31383 635 aa3.88□□□□□ -1.79
PRE4YFR050C YBL036CP38197 257 aa3.88□□□□□ -1.79
PRE4YFR050C SYH1Q02875 849 aaKnown RBP3.88□□□□□ -1.79
PRE4YFR050C YRF1-4O13559 1382 aa3.88□□□□□ -1.79
PRE4YFR050C TAF5P38129 798 aa3.87□□□□□ -1.79
PRE4YFR050C BSD2P38356 321 aa3.87□□□□□ -1.79
PRE4YFR050C HED1Q03937 162 aa3.87□□□□□ -1.79
PRE4YFR050C RIM15P43565 1770 aa3.86□□□□□ -1.79
PRE4YFR050C MAK16P10962 306 aaPredicted RBP3.86□□□□□ -1.79
PRE4YFR050C IXR1P33417 597 aa3.86□□□□□ -1.79
PRE4YFR050C YKL133CP36066 463 aa3.86□□□□□ -1.79
PRE4YFR050C AIR1P40507 360 aaKnown RBP3.86□□□□□ -1.79
PRE4YFR050C RIX7Q07844 837 aaKnown RBP3.86□□□□□ -1.79
PRE4YFR050C AHC1Q12433 566 aa3.86□□□□□ -1.79
PRE4YFR050C RPL40AP0CH08 128 aaKnown RBP3.85□□□□□ -1.79
PRE4YFR050C RPL40BP0CH09 128 aaKnown RBP3.85□□□□□ -1.79
PRE4YFR050C PKC1P24583 1151 aa3.85□□□□□ -1.79
PRE4YFR050C PAH1P32567 862 aa3.85□□□□□ -1.79
PRE4YFR050C CSE4P36012 229 aa3.85□□□□□ -1.79
PRE4YFR050C PEA2P40091 420 aa3.85□□□□□ -1.79
PRE4YFR050C TY4B-HP0C2J7 1802 aa3.84□□□□□ -1.79
PRE4YFR050C TY4B-JP47024 1803 aa3.84□□□□□ -1.79
PRE4YFR050C CDC4P07834 779 aa3.84□□□□□ -1.79
PRE4YFR050C TEC1P18412 486 aa3.84□□□□□ -1.79
PRE4YFR050C DMA2P53924 522 aa3.84□□□□□ -1.79
PRE4YFR050C ULP1Q02724 621 aa3.84□□□□□ -1.79
PRE4YFR050C ATG13Q06628 738 aa3.84□□□□□ -1.79
PRE4YFR050C BUG1Q12191 341 aa3.84□□□□□ -1.79
PRE4YFR050C ACC1Q00955 2233 aaKnown RBP3.83□□□□□ -1.8
PRE4YFR050C TRA1P38811 3744 aa3.83□□□□□ -1.8
PRE4YFR050C CAN1P04817 590 aa3.83□□□□□ -1.8
PRE4YFR050C VAC17P25591 423 aa3.83□□□□□ -1.8
PRE4YFR050C SPT5P27692 1063 aaKnown RBP3.83□□□□□ -1.8
PRE4YFR050C ICL1P28240 557 aaPredicted RBP3.83□□□□□ -1.8
PRE4YFR050C APE3P37302 537 aaKnown RBP3.83□□□□□ -1.8
PRE4YFR050C FIR1P40020 876 aa3.83□□□□□ -1.8
PRE4YFR050C YJL007CP47080 104 aa3.83□□□□□ -1.8
PRE4YFR050C HST3P53687 447 aa3.83□□□□□ -1.8
PRE4YFR050C CSR2Q12734 1121 aa3.83□□□□□ -1.8
PRE4YFR050C GAR1P28007 205 aaKnown RBP3.82□□□□□ -1.8
PRE4YFR050C AFG2P32794 780 aa3.82□□□□□ -1.8
PRE4YFR050C SHC1P39000 512 aa3.82□□□□□ -1.8
PRE4YFR050C RPL34BP40525 121 aaKnown RBP3.82□□□□□ -1.8
PRE4YFR050C FET4P40988 552 aa3.82□□□□□ -1.8
PRE4YFR050C BRE2P43132 505 aa3.82□□□□□ -1.8
PRE4YFR050C UTP22P53254 1237 aaPredicted RBP3.82□□□□□ -1.8
PRE4YFR050C NAF1P53919 492 aaKnown RBP3.82□□□□□ -1.8
PRE4YFR050C FIG2P25653 1609 aa3.81□□□□□ -1.8
PRE4YFR050C BIO2P32451 375 aa3.81□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms