Protein–RNA interactions for Protein: P04786

TOP1, DNA topoisomerase 1, yeastyeast

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TOP1P04786 YML009W-BYML009W-B 477 nt24.8■■□□□ 1.56
TOP1P04786 NOP1YDL014W 984 nt24.42■■□□□ 1.5
TOP1P04786 NSR1YGR159C 1245 nt24.11■■□□□ 1.45
TOP1P04786 YKL036CYKL036C 393 nt23.2■■□□□ 1.3
TOP1P04786 YJL027CYJL027C 417 nt21.76■■□□□ 1.07
TOP1P04786 Q0297Q0297 156 nt21.68■■□□□ 1.06
TOP1P04786 SCS3YGL126W 1143 nt21.49■■□□□ 1.03
TOP1P04786 SRX1YKL086W 384 nt21.38■■□□□ 1.01
TOP1P04786 MDJ1YFL016C 1536 nt20.7■□□□□ 0.9
TOP1P04786 YCR051WYCR051W 669 nt20.26■□□□□ 0.83
TOP1P04786 YOL085CYOL085C 342 nt20.1■□□□□ 0.81
TOP1P04786 SCJ1YMR214W 1134 nt19.97■□□□□ 0.79
TOP1P04786 PKP1YIL042C 1185 nt19.64■□□□□ 0.73
TOP1P04786 ATS1YAL020C 1002 nt19.43■□□□□ 0.7
TOP1P04786 RPP1BYDL130W 321 nt19.42■□□□□ 0.7
TOP1P04786 TRN1tP(UGG)A 72 nt18.93■□□□□ 0.62
TOP1P04786 SUF9tP(UGG)F 72 nt18.93■□□□□ 0.62
TOP1P04786 SUF8tP(UGG)H 72 nt18.93■□□□□ 0.62
TOP1P04786 tP(UGG)LtP(UGG)L 72 nt18.93■□□□□ 0.62
TOP1P04786 SUF7tP(UGG)M 72 nt18.93■□□□□ 0.62
TOP1P04786 tP(UGG)N1tP(UGG)N1 72 nt18.93■□□□□ 0.62
TOP1P04786 tP(UGG)N2tP(UGG)N2 72 nt18.93■□□□□ 0.62
TOP1P04786 tP(UGG)O1tP(UGG)O1 72 nt18.93■□□□□ 0.62
TOP1P04786 SUF11tP(UGG)O2 72 nt18.93■□□□□ 0.62
TOP1P04786 DBP2YNL112W 1641 nt18.67■□□□□ 0.58
TOP1P04786 CCC1YLR220W 969 nt18.64■□□□□ 0.57
TOP1P04786 PET122YER153C 765 nt18.46■□□□□ 0.55
TOP1P04786 SCR1SCR1 522 nt18.41■□□□□ 0.54
TOP1P04786 tP(UGG)O3tP(UGG)O3 72 nt18.12■□□□□ 0.49
TOP1P04786 RTC3YHR087W 336 nt18.06■□□□□ 0.48
TOP1P04786 RRN5YLR141W 1092 nt17.99■□□□□ 0.47
TOP1P04786 PST2YDR032C 597 nt17.9■□□□□ 0.46
TOP1P04786 RSB1YOR049C 1065 nt17.79■□□□□ 0.44
TOP1P04786 YER088W-BYER088W-B 147 nt17.66■□□□□ 0.42
TOP1P04786 RVS167YDR388W 1449 nt17.63■□□□□ 0.41
TOP1P04786 YDJ1YNL064C 1230 nt17.55■□□□□ 0.4
TOP1P04786 YBR190WYBR190W 312 nt17.51■□□□□ 0.39
TOP1P04786 YKL097CYKL097C 411 nt17.5■□□□□ 0.39
TOP1P04786 SHR5YOL110W 714 nt17.23■□□□□ 0.35
TOP1P04786 SHU1YHL006C 453 nt16.98■□□□□ 0.31
TOP1P04786 GAR1YHR089C 618 nt16.97■□□□□ 0.31
TOP1P04786 YOR139CYOR139C 393 nt16.73■□□□□ 0.27
TOP1P04786 Q0182Q0182 405 nt16.62■□□□□ 0.25
TOP1P04786 YAL037C-BYAL037C-B 975 nt16.45■□□□□ 0.22
TOP1P04786 DEP1YAL013W 1218 nt16.44■□□□□ 0.22
TOP1P04786 TIR1YER011W 765 nt16.41■□□□□ 0.22
TOP1P04786 NPL3YDR432W 1245 nt16.35■□□□□ 0.21
TOP1P04786 YNL208WYNL208W 600 nt16.31■□□□□ 0.2
TOP1P04786 URN1YPR152C 1398 nt16.28■□□□□ 0.2
TOP1P04786 SSA3YBL075C 1950 nt16.2■□□□□ 0.18
TOP1P04786 RPN10YHR200W 807 nt16.19■□□□□ 0.18
TOP1P04786 SSA1YAL005C 1929 nt16.08■□□□□ 0.16
TOP1P04786 tM(CAU)CtM(CAU)C 72 nt16.02■□□□□ 0.16
TOP1P04786 IMT4tM(CAU)E 72 nt16.02■□□□□ 0.16
TOP1P04786 IMT3tM(CAU)J3 72 nt16.02■□□□□ 0.16
TOP1P04786 IMT1tM(CAU)O1 72 nt16.02■□□□□ 0.16
TOP1P04786 IMT2tM(CAU)P 72 nt16.02■□□□□ 0.16
TOP1P04786 SRB2YHR041C 633 nt15.98■□□□□ 0.15
TOP1P04786 YOL037CYOL037C 354 nt15.97■□□□□ 0.15
TOP1P04786 HOM6YJR139C 1080 nt15.95■□□□□ 0.14
TOP1P04786 OPI9YLR338W 858 nt15.95■□□□□ 0.14
TOP1P04786 YGR021WYGR021W 873 nt15.94■□□□□ 0.14
TOP1P04786 MNP1YGL068W 585 nt15.93■□□□□ 0.14
TOP1P04786 WWM1YFL010C 636 nt15.8■□□□□ 0.12
TOP1P04786 RKM5YLR137W 1104 nt15.69■□□□□ 0.1
TOP1P04786 MOT3YMR070W 1473 nt15.67■□□□□ 0.1
TOP1P04786 SAH1YER043C 1350 nt15.62■□□□□ 0.09
TOP1P04786 YJR018WYJR018W 363 nt15.59■□□□□ 0.09
TOP1P04786 PUS2YGL063W 1113 nt15.58■□□□□ 0.08
TOP1P04786 YJR120WYJR120W 351 nt15.58■□□□□ 0.08
TOP1P04786 YFL021C-AYFL021C-A 855 nt15.56■□□□□ 0.08
TOP1P04786 YLR281CYLR281C 468 nt15.56■□□□□ 0.08
TOP1P04786 BSC6YOL137W 1494 nt15.53■□□□□ 0.08
TOP1P04786 PUN1YLR414C 792 nt15.47■□□□□ 0.07
TOP1P04786 PUT4YOR348C 1884 nt15.47■□□□□ 0.07
TOP1P04786 RPP2BYDR382W 333 nt15.43■□□□□ 0.06
TOP1P04786 WHI5YOR083W 888 nt15.37■□□□□ 0.05
TOP1P04786 MRPL8YJL063C 717 nt15.36■□□□□ 0.05
TOP1P04786 ARE1YCR048W 1833 nt15.31■□□□□ 0.04
TOP1P04786 BDH2YAL061W 1254 nt15.29■□□□□ 0.04
TOP1P04786 LSM3YLR438C-A 270 nt15.25■□□□□ 0.03
TOP1P04786 FMP45YDL222C 930 nt15.19■□□□□ 0.02
TOP1P04786 YPR011CYPR011C 981 nt15.19■□□□□ 0.02
TOP1P04786 PTC2YER089C 1395 nt15.13■□□□□ 0.01
TOP1P04786 DSK2YMR276W 1122 nt15.13■□□□□ 0.01
TOP1P04786 YCH1YGR203W 447 nt15.12■□□□□ 0.01
TOP1P04786 YLR236CYLR236C 324 nt15.09■□□□□ 0.01
TOP1P04786 YHR049C-AYHR049C-A 297 nt15.06■□□□□ 0
TOP1P04786 IMP2'YIL154C 1041 nt15.05■□□□□ -0
TOP1P04786 UBX6YJL048C 1191 nt15.04■□□□□ -0
TOP1P04786 ADO1YJR105W 1023 nt15.03■□□□□ -0
TOP1P04786 INM2YDR287W 879 nt14.95□□□□□ -0.02
TOP1P04786 YEL076C-AYEL076C-A 651 nt14.94□□□□□ -0.02
TOP1P04786 YEL076CYEL076C 651 nt14.94□□□□□ -0.02
TOP1P04786 YLR464WYLR464W 651 nt14.94□□□□□ -0.02
TOP1P04786 POA1YBR022W 534 nt14.94□□□□□ -0.02
TOP1P04786 YBL100CYBL100C 315 nt14.91□□□□□ -0.02
TOP1P04786 YLR154C-GYLR154C-G 150 nt14.87□□□□□ -0.03
TOP1P04786 NAB2YGL122C 1578 nt14.85□□□□□ -0.03
TOP1P04786 TRM9YML014W 840 nt14.84□□□□□ -0.03
Retrieved 100 of 7,029 protein–RNA pairs in 12.2 ms