Protein–RNA interactions for Protein: Q02724

ULP1, Ubiquitin-like-specific protease 1, yeastyeast

Predictions only

Length 621 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ULP1Q02724 YML009W-BYML009W-B 477 nt22.95■■□□□ 1.26
ULP1Q02724 NOP1YDL014W 984 nt22.61■■□□□ 1.21
ULP1Q02724 NSR1YGR159C 1245 nt22.19■■□□□ 1.14
ULP1Q02724 YKL036CYKL036C 393 nt21.54■■□□□ 1.04
ULP1Q02724 YJL027CYJL027C 417 nt20.24■□□□□ 0.83
ULP1Q02724 Q0297Q0297 156 nt20.04■□□□□ 0.8
ULP1Q02724 SCS3YGL126W 1143 nt19.96■□□□□ 0.79
ULP1Q02724 SRX1YKL086W 384 nt19.76■□□□□ 0.75
ULP1Q02724 MDJ1YFL016C 1536 nt19■□□□□ 0.63
ULP1Q02724 YCR051WYCR051W 669 nt18.81■□□□□ 0.6
ULP1Q02724 YOL085CYOL085C 342 nt18.65■□□□□ 0.58
ULP1Q02724 SCJ1YMR214W 1134 nt18.6■□□□□ 0.57
ULP1Q02724 PKP1YIL042C 1185 nt18.27■□□□□ 0.52
ULP1Q02724 ATS1YAL020C 1002 nt18.08■□□□□ 0.48
ULP1Q02724 RPP1BYDL130W 321 nt17.98■□□□□ 0.47
ULP1Q02724 TRN1tP(UGG)A 72 nt17.43■□□□□ 0.38
ULP1Q02724 SUF9tP(UGG)F 72 nt17.43■□□□□ 0.38
ULP1Q02724 SUF8tP(UGG)H 72 nt17.43■□□□□ 0.38
ULP1Q02724 tP(UGG)LtP(UGG)L 72 nt17.43■□□□□ 0.38
ULP1Q02724 SUF7tP(UGG)M 72 nt17.43■□□□□ 0.38
ULP1Q02724 tP(UGG)N1tP(UGG)N1 72 nt17.43■□□□□ 0.38
ULP1Q02724 tP(UGG)N2tP(UGG)N2 72 nt17.43■□□□□ 0.38
ULP1Q02724 tP(UGG)O1tP(UGG)O1 72 nt17.43■□□□□ 0.38
ULP1Q02724 SUF11tP(UGG)O2 72 nt17.43■□□□□ 0.38
ULP1Q02724 CCC1YLR220W 969 nt17.29■□□□□ 0.36
ULP1Q02724 DBP2YNL112W 1641 nt17.12■□□□□ 0.33
ULP1Q02724 SCR1SCR1 522 nt17.1■□□□□ 0.33
ULP1Q02724 PET122YER153C 765 nt17.09■□□□□ 0.33
ULP1Q02724 RTC3YHR087W 336 nt16.9■□□□□ 0.3
ULP1Q02724 tP(UGG)O3tP(UGG)O3 72 nt16.74■□□□□ 0.27
ULP1Q02724 RRN5YLR141W 1092 nt16.7■□□□□ 0.26
ULP1Q02724 PST2YDR032C 597 nt16.63■□□□□ 0.25
ULP1Q02724 RSB1YOR049C 1065 nt16.55■□□□□ 0.24
ULP1Q02724 YER088W-BYER088W-B 147 nt16.37■□□□□ 0.21
ULP1Q02724 YKL097CYKL097C 411 nt16.33■□□□□ 0.2
ULP1Q02724 RVS167YDR388W 1449 nt16.25■□□□□ 0.19
ULP1Q02724 YDJ1YNL064C 1230 nt16.19■□□□□ 0.18
ULP1Q02724 YBR190WYBR190W 312 nt16.02■□□□□ 0.16
ULP1Q02724 SHR5YOL110W 714 nt15.86■□□□□ 0.13
ULP1Q02724 SHU1YHL006C 453 nt15.77■□□□□ 0.12
ULP1Q02724 GAR1YHR089C 618 nt15.72■□□□□ 0.11
ULP1Q02724 YOR139CYOR139C 393 nt15.56■□□□□ 0.08
ULP1Q02724 YAL037C-BYAL037C-B 975 nt15.31■□□□□ 0.04
ULP1Q02724 NPL3YDR432W 1245 nt15.26■□□□□ 0.03
ULP1Q02724 DEP1YAL013W 1218 nt15.18■□□□□ 0.02
ULP1Q02724 TIR1YER011W 765 nt15.16■□□□□ 0.02
ULP1Q02724 YNL208WYNL208W 600 nt15.02■□□□□ -0
ULP1Q02724 URN1YPR152C 1398 nt14.97□□□□□ -0.01
ULP1Q02724 tM(CAU)CtM(CAU)C 72 nt14.91□□□□□ -0.02
ULP1Q02724 IMT4tM(CAU)E 72 nt14.91□□□□□ -0.02
ULP1Q02724 IMT3tM(CAU)J3 72 nt14.91□□□□□ -0.02
ULP1Q02724 IMT1tM(CAU)O1 72 nt14.91□□□□□ -0.02
ULP1Q02724 IMT2tM(CAU)P 72 nt14.91□□□□□ -0.02
ULP1Q02724 RPN10YHR200W 807 nt14.91□□□□□ -0.02
ULP1Q02724 SSA1YAL005C 1929 nt14.82□□□□□ -0.04
ULP1Q02724 YOL037CYOL037C 354 nt14.79□□□□□ -0.04
ULP1Q02724 MNP1YGL068W 585 nt14.76□□□□□ -0.05
ULP1Q02724 YGR021WYGR021W 873 nt14.74□□□□□ -0.05
ULP1Q02724 SSA3YBL075C 1950 nt14.73□□□□□ -0.05
ULP1Q02724 HOM6YJR139C 1080 nt14.73□□□□□ -0.05
ULP1Q02724 SRB2YHR041C 633 nt14.72□□□□□ -0.05
ULP1Q02724 WWM1YFL010C 636 nt14.62□□□□□ -0.07
ULP1Q02724 BSC6YOL137W 1494 nt14.62□□□□□ -0.07
ULP1Q02724 MOT3YMR070W 1473 nt14.61□□□□□ -0.07
ULP1Q02724 OPI9YLR338W 858 nt14.6□□□□□ -0.07
ULP1Q02724 PUS2YGL063W 1113 nt14.52□□□□□ -0.09
ULP1Q02724 RKM5YLR137W 1104 nt14.51□□□□□ -0.09
ULP1Q02724 YLR281CYLR281C 468 nt14.42□□□□□ -0.1
ULP1Q02724 PUT4YOR348C 1884 nt14.39□□□□□ -0.11
ULP1Q02724 YFL021C-AYFL021C-A 855 nt14.36□□□□□ -0.11
ULP1Q02724 Q0182Q0182 405 nt14.33□□□□□ -0.12
ULP1Q02724 YJR018WYJR018W 363 nt14.33□□□□□ -0.12
ULP1Q02724 SAH1YER043C 1350 nt14.33□□□□□ -0.12
ULP1Q02724 MRPL8YJL063C 717 nt14.3□□□□□ -0.12
ULP1Q02724 WHI5YOR083W 888 nt14.27□□□□□ -0.13
ULP1Q02724 YJR120WYJR120W 351 nt14.26□□□□□ -0.13
ULP1Q02724 RPP2BYDR382W 333 nt14.23□□□□□ -0.13
ULP1Q02724 PUN1YLR414C 792 nt14.19□□□□□ -0.14
ULP1Q02724 FMP45YDL222C 930 nt14.15□□□□□ -0.14
ULP1Q02724 UBX6YJL048C 1191 nt14.1□□□□□ -0.15
ULP1Q02724 YPR011CYPR011C 981 nt14.09□□□□□ -0.15
ULP1Q02724 BDH2YAL061W 1254 nt14.08□□□□□ -0.16
ULP1Q02724 YCH1YGR203W 447 nt14.07□□□□□ -0.16
ULP1Q02724 LSM3YLR438C-A 270 nt14.04□□□□□ -0.16
ULP1Q02724 DSK2YMR276W 1122 nt14.04□□□□□ -0.16
ULP1Q02724 ADO1YJR105W 1023 nt14.03□□□□□ -0.16
ULP1Q02724 YLR236CYLR236C 324 nt13.97□□□□□ -0.17
ULP1Q02724 ARE1YCR048W 1833 nt13.97□□□□□ -0.17
ULP1Q02724 IMP2'YIL154C 1041 nt13.93□□□□□ -0.18
ULP1Q02724 YEL076C-AYEL076C-A 651 nt13.92□□□□□ -0.18
ULP1Q02724 YEL076CYEL076C 651 nt13.92□□□□□ -0.18
ULP1Q02724 YLR464WYLR464W 651 nt13.92□□□□□ -0.18
ULP1Q02724 PTC2YER089C 1395 nt13.9□□□□□ -0.18
ULP1Q02724 POA1YBR022W 534 nt13.88□□□□□ -0.19
ULP1Q02724 YHR049C-AYHR049C-A 297 nt13.79□□□□□ -0.2
ULP1Q02724 RTG1YOL067C 534 nt13.77□□□□□ -0.21
ULP1Q02724 YLR154C-GYLR154C-G 150 nt13.75□□□□□ -0.21
ULP1Q02724 SIS1YNL007C 1059 nt13.75□□□□□ -0.21
ULP1Q02724 SPP1YPL138C 1062 nt13.75□□□□□ -0.21
ULP1Q02724 INM2YDR287W 879 nt13.74□□□□□ -0.21
Retrieved 100 of 7,029 protein–RNA pairs in 12.2 ms