Protein–RNA interactions for Protein: P0CX14

YRF1-3, Y' element ATP-dependent helicase protein 1 copy 3, yeastyeast

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YRF1-3P0CX14 YML009W-BYML009W-B 477 nt26.97■■□□□ 1.91
YRF1-3P0CX14 NOP1YDL014W 984 nt25.83■■□□□ 1.72
YRF1-3P0CX14 NSR1YGR159C 1245 nt25.75■■□□□ 1.71
YRF1-3P0CX14 YKL036CYKL036C 393 nt24.83■■□□□ 1.56
YRF1-3P0CX14 YJL027CYJL027C 417 nt23.23■■□□□ 1.31
YRF1-3P0CX14 Q0297Q0297 156 nt23.12■■□□□ 1.29
YRF1-3P0CX14 SCS3YGL126W 1143 nt23.11■■□□□ 1.29
YRF1-3P0CX14 SRX1YKL086W 384 nt23.09■■□□□ 1.29
YRF1-3P0CX14 MDJ1YFL016C 1536 nt22.78■■□□□ 1.24
YRF1-3P0CX14 YCR051WYCR051W 669 nt21.93■■□□□ 1.1
YRF1-3P0CX14 YOL085CYOL085C 342 nt21.33■■□□□ 1.01
YRF1-3P0CX14 PKP1YIL042C 1185 nt21.29■■□□□ 1
YRF1-3P0CX14 SCJ1YMR214W 1134 nt20.85■□□□□ 0.93
YRF1-3P0CX14 RPP1BYDL130W 321 nt20.67■□□□□ 0.9
YRF1-3P0CX14 ATS1YAL020C 1002 nt20.58■□□□□ 0.88
YRF1-3P0CX14 TRN1tP(UGG)A 72 nt20.52■□□□□ 0.88
YRF1-3P0CX14 SUF9tP(UGG)F 72 nt20.52■□□□□ 0.88
YRF1-3P0CX14 SUF8tP(UGG)H 72 nt20.52■□□□□ 0.88
YRF1-3P0CX14 tP(UGG)LtP(UGG)L 72 nt20.52■□□□□ 0.88
YRF1-3P0CX14 SUF7tP(UGG)M 72 nt20.52■□□□□ 0.88
YRF1-3P0CX14 tP(UGG)N1tP(UGG)N1 72 nt20.52■□□□□ 0.88
YRF1-3P0CX14 tP(UGG)N2tP(UGG)N2 72 nt20.52■□□□□ 0.88
YRF1-3P0CX14 tP(UGG)O1tP(UGG)O1 72 nt20.52■□□□□ 0.88
YRF1-3P0CX14 SUF11tP(UGG)O2 72 nt20.52■□□□□ 0.88
YRF1-3P0CX14 DBP2YNL112W 1641 nt20.37■□□□□ 0.85
YRF1-3P0CX14 CCC1YLR220W 969 nt20.26■□□□□ 0.83
YRF1-3P0CX14 PET122YER153C 765 nt19.94■□□□□ 0.78
YRF1-3P0CX14 SCR1SCR1 522 nt19.67■□□□□ 0.74
YRF1-3P0CX14 tP(UGG)O3tP(UGG)O3 72 nt19.52■□□□□ 0.71
YRF1-3P0CX14 RRN5YLR141W 1092 nt19.31■□□□□ 0.68
YRF1-3P0CX14 RTC3YHR087W 336 nt19.26■□□□□ 0.67
YRF1-3P0CX14 RSB1YOR049C 1065 nt19.23■□□□□ 0.67
YRF1-3P0CX14 RVS167YDR388W 1449 nt19.01■□□□□ 0.63
YRF1-3P0CX14 PST2YDR032C 597 nt18.96■□□□□ 0.63
YRF1-3P0CX14 YER088W-BYER088W-B 147 nt18.92■□□□□ 0.62
YRF1-3P0CX14 YBR190WYBR190W 312 nt18.87■□□□□ 0.61
YRF1-3P0CX14 YDJ1YNL064C 1230 nt18.67■□□□□ 0.58
YRF1-3P0CX14 YKL097CYKL097C 411 nt18.66■□□□□ 0.58
YRF1-3P0CX14 SHR5YOL110W 714 nt18.56■□□□□ 0.56
YRF1-3P0CX14 GAR1YHR089C 618 nt18.37■□□□□ 0.53
YRF1-3P0CX14 SHU1YHL006C 453 nt18.24■□□□□ 0.51
YRF1-3P0CX14 DEP1YAL013W 1218 nt18.14■□□□□ 0.49
YRF1-3P0CX14 YAL037C-BYAL037C-B 975 nt18.02■□□□□ 0.48
YRF1-3P0CX14 YOR139CYOR139C 393 nt17.99■□□□□ 0.47
YRF1-3P0CX14 URN1YPR152C 1398 nt17.84■□□□□ 0.45
YRF1-3P0CX14 TIR1YER011W 765 nt17.65■□□□□ 0.42
YRF1-3P0CX14 SRB2YHR041C 633 nt17.55■□□□□ 0.4
YRF1-3P0CX14 NPL3YDR432W 1245 nt17.5■□□□□ 0.39
YRF1-3P0CX14 YNL208WYNL208W 600 nt17.48■□□□□ 0.39
YRF1-3P0CX14 MNP1YGL068W 585 nt17.43■□□□□ 0.38
YRF1-3P0CX14 SSA1YAL005C 1929 nt17.42■□□□□ 0.38
YRF1-3P0CX14 RPN10YHR200W 807 nt17.35■□□□□ 0.37
YRF1-3P0CX14 OPI9YLR338W 858 nt17.27■□□□□ 0.35
YRF1-3P0CX14 WWM1YFL010C 636 nt17.25■□□□□ 0.35
YRF1-3P0CX14 SAH1YER043C 1350 nt17.21■□□□□ 0.35
YRF1-3P0CX14 HOM6YJR139C 1080 nt17.14■□□□□ 0.33
YRF1-3P0CX14 YJR120WYJR120W 351 nt17.12■□□□□ 0.33
YRF1-3P0CX14 YOL037CYOL037C 354 nt17.05■□□□□ 0.32
YRF1-3P0CX14 YGR021WYGR021W 873 nt17■□□□□ 0.31
YRF1-3P0CX14 YJR018WYJR018W 363 nt16.97■□□□□ 0.31
YRF1-3P0CX14 tM(CAU)CtM(CAU)C 72 nt16.94■□□□□ 0.3
YRF1-3P0CX14 IMT4tM(CAU)E 72 nt16.94■□□□□ 0.3
YRF1-3P0CX14 IMT3tM(CAU)J3 72 nt16.94■□□□□ 0.3
YRF1-3P0CX14 IMT1tM(CAU)O1 72 nt16.94■□□□□ 0.3
YRF1-3P0CX14 IMT2tM(CAU)P 72 nt16.94■□□□□ 0.3
YRF1-3P0CX14 ARE1YCR048W 1833 nt16.83■□□□□ 0.29
YRF1-3P0CX14 PUT4YOR348C 1884 nt16.77■□□□□ 0.28
YRF1-3P0CX14 RKM5YLR137W 1104 nt16.77■□□□□ 0.27
YRF1-3P0CX14 YHR049C-AYHR049C-A 297 nt16.75■□□□□ 0.27
YRF1-3P0CX14 PUS2YGL063W 1113 nt16.73■□□□□ 0.27
YRF1-3P0CX14 SSA3YBL075C 1950 nt16.73■□□□□ 0.27
YRF1-3P0CX14 YFL021C-AYFL021C-A 855 nt16.71■□□□□ 0.27
YRF1-3P0CX14 PUN1YLR414C 792 nt16.69■□□□□ 0.26
YRF1-3P0CX14 MOT3YMR070W 1473 nt16.63■□□□□ 0.25
YRF1-3P0CX14 RPP2BYDR382W 333 nt16.6■□□□□ 0.25
YRF1-3P0CX14 YLR281CYLR281C 468 nt16.59■□□□□ 0.25
YRF1-3P0CX14 BDH2YAL061W 1254 nt16.55■□□□□ 0.24
YRF1-3P0CX14 WHI5YOR083W 888 nt16.54■□□□□ 0.24
YRF1-3P0CX14 YPR011CYPR011C 981 nt16.45■□□□□ 0.22
YRF1-3P0CX14 PTC2YER089C 1395 nt16.44■□□□□ 0.22
YRF1-3P0CX14 YLR236CYLR236C 324 nt16.4■□□□□ 0.22
YRF1-3P0CX14 POA1YBR022W 534 nt16.4■□□□□ 0.22
YRF1-3P0CX14 BSC6YOL137W 1494 nt16.38■□□□□ 0.21
YRF1-3P0CX14 FMP45YDL222C 930 nt16.37■□□□□ 0.21
YRF1-3P0CX14 BUD23YCR047C 828 nt16.35■□□□□ 0.21
YRF1-3P0CX14 YBL100CYBL100C 315 nt16.22■□□□□ 0.19
YRF1-3P0CX14 DSK2YMR276W 1122 nt16.2■□□□□ 0.18
YRF1-3P0CX14 FIS1YIL065C 468 nt16.19■□□□□ 0.18
YRF1-3P0CX14 LSM3YLR438C-A 270 nt16.14■□□□□ 0.17
YRF1-3P0CX14 YLR154C-GYLR154C-G 150 nt16.14■□□□□ 0.17
YRF1-3P0CX14 NAB2YGL122C 1578 nt16.13■□□□□ 0.17
YRF1-3P0CX14 LPX1YOR084W 1164 nt16.08■□□□□ 0.17
YRF1-3P0CX14 PHO4YFR034C 939 nt16.08■□□□□ 0.16
YRF1-3P0CX14 FPR4YLR449W 1179 nt16.05■□□□□ 0.16
YRF1-3P0CX14 RTG1YOL067C 534 nt16.04■□□□□ 0.16
YRF1-3P0CX14 IMP2'YIL154C 1041 nt16.03■□□□□ 0.16
YRF1-3P0CX14 TRM9YML014W 840 nt16.03■□□□□ 0.16
YRF1-3P0CX14 YCH1YGR203W 447 nt16.02■□□□□ 0.16
YRF1-3P0CX14 MRPL8YJL063C 717 nt16■□□□□ 0.15
YRF1-3P0CX14 SPP1YPL138C 1062 nt15.99■□□□□ 0.15
Retrieved 100 of 7,029 protein–RNA pairs in 14.3 ms