Protein–RNA interactions for Protein: P47024

TY4B-J, Transposon Ty4-J Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,803 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4B-JP47024 YML009W-BYML009W-B 477 nt27.74■■■□□ 2.03
TY4B-JP47024 NOP1YDL014W 984 nt26.47■■□□□ 1.83
TY4B-JP47024 NSR1YGR159C 1245 nt26.47■■□□□ 1.83
TY4B-JP47024 YKL036CYKL036C 393 nt25.41■■□□□ 1.66
TY4B-JP47024 YJL027CYJL027C 417 nt23.73■■□□□ 1.39
TY4B-JP47024 Q0297Q0297 156 nt23.7■■□□□ 1.39
TY4B-JP47024 SRX1YKL086W 384 nt23.68■■□□□ 1.38
TY4B-JP47024 SCS3YGL126W 1143 nt23.67■■□□□ 1.38
TY4B-JP47024 MDJ1YFL016C 1536 nt23.57■■□□□ 1.36
TY4B-JP47024 YCR051WYCR051W 669 nt22.45■■□□□ 1.18
TY4B-JP47024 YOL085CYOL085C 342 nt21.79■■□□□ 1.08
TY4B-JP47024 PKP1YIL042C 1185 nt21.75■■□□□ 1.07
TY4B-JP47024 SCJ1YMR214W 1134 nt21.24■□□□□ 0.99
TY4B-JP47024 RPP1BYDL130W 321 nt21.19■□□□□ 0.98
TY4B-JP47024 TRN1tP(UGG)A 72 nt21.17■□□□□ 0.98
TY4B-JP47024 SUF9tP(UGG)F 72 nt21.17■□□□□ 0.98
TY4B-JP47024 SUF8tP(UGG)H 72 nt21.17■□□□□ 0.98
TY4B-JP47024 tP(UGG)LtP(UGG)L 72 nt21.17■□□□□ 0.98
TY4B-JP47024 SUF7tP(UGG)M 72 nt21.17■□□□□ 0.98
TY4B-JP47024 tP(UGG)N1tP(UGG)N1 72 nt21.17■□□□□ 0.98
TY4B-JP47024 tP(UGG)N2tP(UGG)N2 72 nt21.17■□□□□ 0.98
TY4B-JP47024 tP(UGG)O1tP(UGG)O1 72 nt21.17■□□□□ 0.98
TY4B-JP47024 SUF11tP(UGG)O2 72 nt21.17■□□□□ 0.98
TY4B-JP47024 DBP2YNL112W 1641 nt21.03■□□□□ 0.96
TY4B-JP47024 ATS1YAL020C 1002 nt20.97■□□□□ 0.95
TY4B-JP47024 CCC1YLR220W 969 nt20.74■□□□□ 0.91
TY4B-JP47024 PET122YER153C 765 nt20.48■□□□□ 0.87
TY4B-JP47024 SCR1SCR1 522 nt20.14■□□□□ 0.81
TY4B-JP47024 tP(UGG)O3tP(UGG)O3 72 nt20.03■□□□□ 0.8
TY4B-JP47024 RRN5YLR141W 1092 nt19.72■□□□□ 0.75
TY4B-JP47024 RSB1YOR049C 1065 nt19.67■□□□□ 0.74
TY4B-JP47024 RVS167YDR388W 1449 nt19.58■□□□□ 0.73
TY4B-JP47024 RTC3YHR087W 336 nt19.58■□□□□ 0.73
TY4B-JP47024 YBR190WYBR190W 312 nt19.51■□□□□ 0.71
TY4B-JP47024 YER088W-BYER088W-B 147 nt19.36■□□□□ 0.69
TY4B-JP47024 PST2YDR032C 597 nt19.32■□□□□ 0.68
TY4B-JP47024 YDJ1YNL064C 1230 nt19.18■□□□□ 0.66
TY4B-JP47024 SHR5YOL110W 714 nt19.14■□□□□ 0.65
TY4B-JP47024 YKL097CYKL097C 411 nt19.03■□□□□ 0.64
TY4B-JP47024 GAR1YHR089C 618 nt18.82■□□□□ 0.6
TY4B-JP47024 SHU1YHL006C 453 nt18.65■□□□□ 0.58
TY4B-JP47024 DEP1YAL013W 1218 nt18.65■□□□□ 0.58
TY4B-JP47024 URN1YPR152C 1398 nt18.42■□□□□ 0.54
TY4B-JP47024 YOR139CYOR139C 393 nt18.37■□□□□ 0.53
TY4B-JP47024 YAL037C-BYAL037C-B 975 nt18.36■□□□□ 0.53
TY4B-JP47024 TIR1YER011W 765 nt18.13■□□□□ 0.49
TY4B-JP47024 SRB2YHR041C 633 nt18.06■□□□□ 0.48
TY4B-JP47024 YNL208WYNL208W 600 nt18■□□□□ 0.47
TY4B-JP47024 MNP1YGL068W 585 nt17.95■□□□□ 0.46
TY4B-JP47024 RPN10YHR200W 807 nt17.92■□□□□ 0.46
TY4B-JP47024 SSA1YAL005C 1929 nt17.91■□□□□ 0.46
TY4B-JP47024 NPL3YDR432W 1245 nt17.88■□□□□ 0.45
TY4B-JP47024 OPI9YLR338W 858 nt17.83■□□□□ 0.44
TY4B-JP47024 SAH1YER043C 1350 nt17.76■□□□□ 0.43
TY4B-JP47024 YJR120WYJR120W 351 nt17.72■□□□□ 0.43
TY4B-JP47024 WWM1YFL010C 636 nt17.69■□□□□ 0.42
TY4B-JP47024 HOM6YJR139C 1080 nt17.62■□□□□ 0.41
TY4B-JP47024 YOL037CYOL037C 354 nt17.54■□□□□ 0.4
TY4B-JP47024 YGR021WYGR021W 873 nt17.49■□□□□ 0.39
TY4B-JP47024 YJR018WYJR018W 363 nt17.47■□□□□ 0.39
TY4B-JP47024 ARE1YCR048W 1833 nt17.45■□□□□ 0.38
TY4B-JP47024 PUT4YOR348C 1884 nt17.43■□□□□ 0.38
TY4B-JP47024 YHR049C-AYHR049C-A 297 nt17.41■□□□□ 0.38
TY4B-JP47024 SSA3YBL075C 1950 nt17.31■□□□□ 0.36
TY4B-JP47024 RKM5YLR137W 1104 nt17.24■□□□□ 0.35
TY4B-JP47024 PUN1YLR414C 792 nt17.24■□□□□ 0.35
TY4B-JP47024 tM(CAU)CtM(CAU)C 72 nt17.23■□□□□ 0.35
TY4B-JP47024 IMT4tM(CAU)E 72 nt17.23■□□□□ 0.35
TY4B-JP47024 IMT3tM(CAU)J3 72 nt17.23■□□□□ 0.35
TY4B-JP47024 IMT1tM(CAU)O1 72 nt17.23■□□□□ 0.35
TY4B-JP47024 IMT2tM(CAU)P 72 nt17.23■□□□□ 0.35
TY4B-JP47024 YFL021C-AYFL021C-A 855 nt17.18■□□□□ 0.34
TY4B-JP47024 RPP2BYDR382W 333 nt17.1■□□□□ 0.33
TY4B-JP47024 BDH2YAL061W 1254 nt17.06■□□□□ 0.32
TY4B-JP47024 PUS2YGL063W 1113 nt17.05■□□□□ 0.32
TY4B-JP47024 MOT3YMR070W 1473 nt16.99■□□□□ 0.31
TY4B-JP47024 YLR281CYLR281C 468 nt16.96■□□□□ 0.31
TY4B-JP47024 POA1YBR022W 534 nt16.93■□□□□ 0.3
TY4B-JP47024 PTC2YER089C 1395 nt16.93■□□□□ 0.3
TY4B-JP47024 WHI5YOR083W 888 nt16.9■□□□□ 0.3
TY4B-JP47024 BUD23YCR047C 828 nt16.89■□□□□ 0.29
TY4B-JP47024 FIS1YIL065C 468 nt16.88■□□□□ 0.29
TY4B-JP47024 YLR236CYLR236C 324 nt16.88■□□□□ 0.29
TY4B-JP47024 YBL100CYBL100C 315 nt16.77■□□□□ 0.28
TY4B-JP47024 YPR011CYPR011C 981 nt16.75■□□□□ 0.27
TY4B-JP47024 FMP45YDL222C 930 nt16.73■□□□□ 0.27
TY4B-JP47024 PHO4YFR034C 939 nt16.68■□□□□ 0.26
TY4B-JP47024 NAB2YGL122C 1578 nt16.67■□□□□ 0.26
TY4B-JP47024 BSC6YOL137W 1494 nt16.63■□□□□ 0.25
TY4B-JP47024 DSK2YMR276W 1122 nt16.61■□□□□ 0.25
TY4B-JP47024 YLR154C-GYLR154C-G 150 nt16.57■□□□□ 0.24
TY4B-JP47024 LSM3YLR438C-A 270 nt16.57■□□□□ 0.24
TY4B-JP47024 FPR4YLR449W 1179 nt16.52■□□□□ 0.24
TY4B-JP47024 LPX1YOR084W 1164 nt16.5■□□□□ 0.23
TY4B-JP47024 DAL1YIR027C 1383 nt16.49■□□□□ 0.23
TY4B-JP47024 INM2YDR287W 879 nt16.43■□□□□ 0.22
TY4B-JP47024 IMP2'YIL154C 1041 nt16.43■□□□□ 0.22
TY4B-JP47024 TRM9YML014W 840 nt16.41■□□□□ 0.22
TY4B-JP47024 RTG1YOL067C 534 nt16.41■□□□□ 0.22
TY4B-JP47024 FUN26YAL022C 1554 nt16.39■□□□□ 0.21
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms