Protein–RNA interactions for Protein: P38811

TRA1, Transcription-associated protein 1, yeastyeast

Predictions only

Length 3,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRA1P38811 YML009W-BYML009W-B 477 nt18.25■□□□□ 0.51
TRA1P38811 NOP1YDL014W 984 nt17.55■□□□□ 0.4
TRA1P38811 NSR1YGR159C 1245 nt17.14■□□□□ 0.34
TRA1P38811 YKL036CYKL036C 393 nt17.09■□□□□ 0.33
TRA1P38811 YJL027CYJL027C 417 nt16.19■□□□□ 0.18
TRA1P38811 SCS3YGL126W 1143 nt16.09■□□□□ 0.17
TRA1P38811 Q0297Q0297 156 nt15.78■□□□□ 0.12
TRA1P38811 SRX1YKL086W 384 nt15.74■□□□□ 0.11
TRA1P38811 MDJ1YFL016C 1536 nt15.34■□□□□ 0.05
TRA1P38811 YCR051WYCR051W 669 nt14.9□□□□□ -0.02
TRA1P38811 PKP1YIL042C 1185 nt14.9□□□□□ -0.02
TRA1P38811 SCJ1YMR214W 1134 nt14.78□□□□□ -0.04
TRA1P38811 YOL085CYOL085C 342 nt14.75□□□□□ -0.05
TRA1P38811 ATS1YAL020C 1002 nt14.63□□□□□ -0.07
TRA1P38811 RPP1BYDL130W 321 nt14.25□□□□□ -0.13
TRA1P38811 RTC3YHR087W 336 nt14.01□□□□□ -0.17
TRA1P38811 DBP2YNL112W 1641 nt13.89□□□□□ -0.19
TRA1P38811 TRN1tP(UGG)A 72 nt13.83□□□□□ -0.2
TRA1P38811 SUF9tP(UGG)F 72 nt13.83□□□□□ -0.2
TRA1P38811 SUF8tP(UGG)H 72 nt13.83□□□□□ -0.2
TRA1P38811 tP(UGG)LtP(UGG)L 72 nt13.83□□□□□ -0.2
TRA1P38811 SUF7tP(UGG)M 72 nt13.83□□□□□ -0.2
TRA1P38811 tP(UGG)N1tP(UGG)N1 72 nt13.83□□□□□ -0.2
TRA1P38811 tP(UGG)N2tP(UGG)N2 72 nt13.83□□□□□ -0.2
TRA1P38811 tP(UGG)O1tP(UGG)O1 72 nt13.83□□□□□ -0.2
TRA1P38811 SUF11tP(UGG)O2 72 nt13.83□□□□□ -0.2
TRA1P38811 CCC1YLR220W 969 nt13.76□□□□□ -0.21
TRA1P38811 PET122YER153C 765 nt13.69□□□□□ -0.22
TRA1P38811 SCR1SCR1 522 nt13.53□□□□□ -0.24
TRA1P38811 tP(UGG)O3tP(UGG)O3 72 nt13.35□□□□□ -0.27
TRA1P38811 RRN5YLR141W 1092 nt13.33□□□□□ -0.28
TRA1P38811 RSB1YOR049C 1065 nt13.3□□□□□ -0.28
TRA1P38811 PST2YDR032C 597 nt13.3□□□□□ -0.28
TRA1P38811 YER088W-BYER088W-B 147 nt13.18□□□□□ -0.3
TRA1P38811 YKL097CYKL097C 411 nt13.15□□□□□ -0.3
TRA1P38811 YOR139CYOR139C 393 nt12.78□□□□□ -0.36
TRA1P38811 SHU1YHL006C 453 nt12.73□□□□□ -0.37
TRA1P38811 RVS167YDR388W 1449 nt12.63□□□□□ -0.39
TRA1P38811 YBR190WYBR190W 312 nt12.62□□□□□ -0.39
TRA1P38811 YDJ1YNL064C 1230 nt12.6□□□□□ -0.39
TRA1P38811 SHR5YOL110W 714 nt12.55□□□□□ -0.4
TRA1P38811 GAR1YHR089C 618 nt12.53□□□□□ -0.4
TRA1P38811 YAL037C-BYAL037C-B 975 nt12.52□□□□□ -0.41
TRA1P38811 NPL3YDR432W 1245 nt12.47□□□□□ -0.41
TRA1P38811 DEP1YAL013W 1218 nt12.29□□□□□ -0.44
TRA1P38811 MNP1YGL068W 585 nt12.08□□□□□ -0.48
TRA1P38811 tM(CAU)CtM(CAU)C 72 nt12.03□□□□□ -0.48
TRA1P38811 IMT4tM(CAU)E 72 nt12.03□□□□□ -0.48
TRA1P38811 IMT3tM(CAU)J3 72 nt12.03□□□□□ -0.48
TRA1P38811 IMT1tM(CAU)O1 72 nt12.03□□□□□ -0.48
TRA1P38811 IMT2tM(CAU)P 72 nt12.03□□□□□ -0.48
TRA1P38811 URN1YPR152C 1398 nt12.01□□□□□ -0.49
TRA1P38811 MOT3YMR070W 1473 nt12□□□□□ -0.49
TRA1P38811 SSA1YAL005C 1929 nt11.95□□□□□ -0.5
TRA1P38811 BSC6YOL137W 1494 nt11.91□□□□□ -0.5
TRA1P38811 TIR1YER011W 765 nt11.88□□□□□ -0.51
TRA1P38811 SRB2YHR041C 633 nt11.84□□□□□ -0.51
TRA1P38811 PUS2YGL063W 1113 nt11.82□□□□□ -0.52
TRA1P38811 RPN10YHR200W 807 nt11.81□□□□□ -0.52
TRA1P38811 YNL208WYNL208W 600 nt11.79□□□□□ -0.52
TRA1P38811 HOM6YJR139C 1080 nt11.78□□□□□ -0.52
TRA1P38811 SSA3YBL075C 1950 nt11.78□□□□□ -0.52
TRA1P38811 WWM1YFL010C 636 nt11.72□□□□□ -0.53
TRA1P38811 YGR021WYGR021W 873 nt11.72□□□□□ -0.53
TRA1P38811 MRPL8YJL063C 717 nt11.71□□□□□ -0.53
TRA1P38811 ARE1YCR048W 1833 nt11.66□□□□□ -0.54
TRA1P38811 UBX6YJL048C 1191 nt11.66□□□□□ -0.54
TRA1P38811 YOL037CYOL037C 354 nt11.62□□□□□ -0.55
TRA1P38811 OPI9YLR338W 858 nt11.59□□□□□ -0.55
TRA1P38811 YLR281CYLR281C 468 nt11.55□□□□□ -0.56
TRA1P38811 YLR236CYLR236C 324 nt11.51□□□□□ -0.57
TRA1P38811 DSK2YMR276W 1122 nt11.5□□□□□ -0.57
TRA1P38811 PUT4YOR348C 1884 nt11.48□□□□□ -0.57
TRA1P38811 YPR011CYPR011C 981 nt11.47□□□□□ -0.57
TRA1P38811 YFL015W-AYFL015W-A 318 nt11.46□□□□□ -0.58
TRA1P38811 WHI5YOR083W 888 nt11.44□□□□□ -0.58
TRA1P38811 FMP45YDL222C 930 nt11.4□□□□□ -0.58
TRA1P38811 SAH1YER043C 1350 nt11.39□□□□□ -0.59
TRA1P38811 YJR120WYJR120W 351 nt11.38□□□□□ -0.59
TRA1P38811 SBA1YKL117W 651 nt11.35□□□□□ -0.59
TRA1P38811 RKM5YLR137W 1104 nt11.35□□□□□ -0.59
TRA1P38811 YJR018WYJR018W 363 nt11.33□□□□□ -0.6
TRA1P38811 YFL021C-AYFL021C-A 855 nt11.32□□□□□ -0.6
TRA1P38811 YEL076C-AYEL076C-A 651 nt11.31□□□□□ -0.6
TRA1P38811 YEL076CYEL076C 651 nt11.31□□□□□ -0.6
TRA1P38811 YLR464WYLR464W 651 nt11.31□□□□□ -0.6
TRA1P38811 YCH1YGR203W 447 nt11.25□□□□□ -0.61
TRA1P38811 ADO1YJR105W 1023 nt11.25□□□□□ -0.61
TRA1P38811 SPP1YPL138C 1062 nt11.25□□□□□ -0.61
TRA1P38811 YDR094WYDR094W 336 nt11.21□□□□□ -0.61
TRA1P38811 YHR049C-AYHR049C-A 297 nt11.21□□□□□ -0.62
TRA1P38811 RPP2BYDR382W 333 nt11.2□□□□□ -0.62
TRA1P38811 BDH2YAL061W 1254 nt11.18□□□□□ -0.62
TRA1P38811 RTG1YOL067C 534 nt11.17□□□□□ -0.62
TRA1P38811 HUA1YGR268C 597 nt11.12□□□□□ -0.63
TRA1P38811 LPX1YOR084W 1164 nt11.11□□□□□ -0.63
TRA1P38811 POA1YBR022W 534 nt11.09□□□□□ -0.63
TRA1P38811 PTC2YER089C 1395 nt11.08□□□□□ -0.64
TRA1P38811 PUN1YLR414C 792 nt11.05□□□□□ -0.64
TRA1P38811 BUD23YCR047C 828 nt10.98□□□□□ -0.65
Retrieved 100 of 7,029 protein–RNA pairs in 7.8 ms