Protein–RNA interactions for Protein: P0CE11

HVG1, Probable GDP-mannose transporter 2, yeastyeast

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HVG1P0CE11 YML009W-BYML009W-B 477 nt23.76■■□□□ 1.39
HVG1P0CE11 NOP1YDL014W 984 nt23.37■■□□□ 1.33
HVG1P0CE11 NSR1YGR159C 1245 nt22.92■■□□□ 1.26
HVG1P0CE11 YKL036CYKL036C 393 nt22.26■■□□□ 1.15
HVG1P0CE11 YJL027CYJL027C 417 nt20.95■□□□□ 0.94
HVG1P0CE11 Q0297Q0297 156 nt20.67■□□□□ 0.9
HVG1P0CE11 SCS3YGL126W 1143 nt20.63■□□□□ 0.89
HVG1P0CE11 SRX1YKL086W 384 nt20.41■□□□□ 0.86
HVG1P0CE11 MDJ1YFL016C 1536 nt19.69■□□□□ 0.74
HVG1P0CE11 YCR051WYCR051W 669 nt19.48■□□□□ 0.71
HVG1P0CE11 YOL085CYOL085C 342 nt19.26■□□□□ 0.67
HVG1P0CE11 SCJ1YMR214W 1134 nt19.17■□□□□ 0.66
HVG1P0CE11 PKP1YIL042C 1185 nt18.94■□□□□ 0.62
HVG1P0CE11 ATS1YAL020C 1002 nt18.67■□□□□ 0.58
HVG1P0CE11 RPP1BYDL130W 321 nt18.57■□□□□ 0.56
HVG1P0CE11 TRN1tP(UGG)A 72 nt18■□□□□ 0.47
HVG1P0CE11 SUF9tP(UGG)F 72 nt18■□□□□ 0.47
HVG1P0CE11 SUF8tP(UGG)H 72 nt18■□□□□ 0.47
HVG1P0CE11 tP(UGG)LtP(UGG)L 72 nt18■□□□□ 0.47
HVG1P0CE11 SUF7tP(UGG)M 72 nt18■□□□□ 0.47
HVG1P0CE11 tP(UGG)N1tP(UGG)N1 72 nt18■□□□□ 0.47
HVG1P0CE11 tP(UGG)N2tP(UGG)N2 72 nt18■□□□□ 0.47
HVG1P0CE11 tP(UGG)O1tP(UGG)O1 72 nt18■□□□□ 0.47
HVG1P0CE11 SUF11tP(UGG)O2 72 nt18■□□□□ 0.47
HVG1P0CE11 CCC1YLR220W 969 nt17.93■□□□□ 0.46
HVG1P0CE11 SCR1SCR1 522 nt17.69■□□□□ 0.42
HVG1P0CE11 DBP2YNL112W 1641 nt17.68■□□□□ 0.42
HVG1P0CE11 PET122YER153C 765 nt17.67■□□□□ 0.42
HVG1P0CE11 RTC3YHR087W 336 nt17.49■□□□□ 0.39
HVG1P0CE11 tP(UGG)O3tP(UGG)O3 72 nt17.31■□□□□ 0.36
HVG1P0CE11 RRN5YLR141W 1092 nt17.26■□□□□ 0.35
HVG1P0CE11 PST2YDR032C 597 nt17.15■□□□□ 0.34
HVG1P0CE11 RSB1YOR049C 1065 nt17.14■□□□□ 0.33
HVG1P0CE11 YER088W-BYER088W-B 147 nt16.91■□□□□ 0.3
HVG1P0CE11 YKL097CYKL097C 411 nt16.89■□□□□ 0.29
HVG1P0CE11 RVS167YDR388W 1449 nt16.82■□□□□ 0.28
HVG1P0CE11 YDJ1YNL064C 1230 nt16.71■□□□□ 0.27
HVG1P0CE11 YBR190WYBR190W 312 nt16.55■□□□□ 0.24
HVG1P0CE11 SHR5YOL110W 714 nt16.39■□□□□ 0.21
HVG1P0CE11 SHU1YHL006C 453 nt16.3■□□□□ 0.2
HVG1P0CE11 GAR1YHR089C 618 nt16.28■□□□□ 0.2
HVG1P0CE11 YOR139CYOR139C 393 nt16.06■□□□□ 0.16
HVG1P0CE11 YAL037C-BYAL037C-B 975 nt15.86■□□□□ 0.13
HVG1P0CE11 NPL3YDR432W 1245 nt15.79■□□□□ 0.12
HVG1P0CE11 DEP1YAL013W 1218 nt15.75■□□□□ 0.11
HVG1P0CE11 TIR1YER011W 765 nt15.67■□□□□ 0.1
HVG1P0CE11 YNL208WYNL208W 600 nt15.54■□□□□ 0.08
HVG1P0CE11 URN1YPR152C 1398 nt15.5■□□□□ 0.07
HVG1P0CE11 RPN10YHR200W 807 nt15.43■□□□□ 0.06
HVG1P0CE11 tM(CAU)CtM(CAU)C 72 nt15.39■□□□□ 0.05
HVG1P0CE11 IMT4tM(CAU)E 72 nt15.39■□□□□ 0.05
HVG1P0CE11 IMT3tM(CAU)J3 72 nt15.39■□□□□ 0.05
HVG1P0CE11 IMT1tM(CAU)O1 72 nt15.39■□□□□ 0.05
HVG1P0CE11 IMT2tM(CAU)P 72 nt15.39■□□□□ 0.05
HVG1P0CE11 SSA1YAL005C 1929 nt15.33■□□□□ 0.04
HVG1P0CE11 MNP1YGL068W 585 nt15.28■□□□□ 0.04
HVG1P0CE11 YOL037CYOL037C 354 nt15.28■□□□□ 0.04
HVG1P0CE11 YGR021WYGR021W 873 nt15.22■□□□□ 0.03
HVG1P0CE11 HOM6YJR139C 1080 nt15.22■□□□□ 0.03
HVG1P0CE11 SRB2YHR041C 633 nt15.21■□□□□ 0.03
HVG1P0CE11 WWM1YFL010C 636 nt15.13■□□□□ 0.01
HVG1P0CE11 BSC6YOL137W 1494 nt15.13■□□□□ 0.01
HVG1P0CE11 MOT3YMR070W 1473 nt15.09■□□□□ 0.01
HVG1P0CE11 OPI9YLR338W 858 nt15.09■□□□□ 0.01
HVG1P0CE11 PUS2YGL063W 1113 nt15.03■□□□□ -0
HVG1P0CE11 RKM5YLR137W 1104 nt15□□□□□ -0.01
HVG1P0CE11 YLR281CYLR281C 468 nt14.89□□□□□ -0.03
HVG1P0CE11 YJR018WYJR018W 363 nt14.84□□□□□ -0.03
HVG1P0CE11 SAH1YER043C 1350 nt14.84□□□□□ -0.03
HVG1P0CE11 YFL021C-AYFL021C-A 855 nt14.83□□□□□ -0.04
HVG1P0CE11 RPP2BYDR382W 333 nt14.75□□□□□ -0.05
HVG1P0CE11 WHI5YOR083W 888 nt14.75□□□□□ -0.05
HVG1P0CE11 MRPL8YJL063C 717 nt14.72□□□□□ -0.05
HVG1P0CE11 YJR120WYJR120W 351 nt14.72□□□□□ -0.05
HVG1P0CE11 PUN1YLR414C 792 nt14.67□□□□□ -0.06
HVG1P0CE11 FMP45YDL222C 930 nt14.65□□□□□ -0.06
HVG1P0CE11 SSA3YBL075C 1950 nt14.56□□□□□ -0.08
HVG1P0CE11 UBX6YJL048C 1191 nt14.56□□□□□ -0.08
HVG1P0CE11 BDH2YAL061W 1254 nt14.55□□□□□ -0.08
HVG1P0CE11 YPR011CYPR011C 981 nt14.55□□□□□ -0.08
HVG1P0CE11 YCH1YGR203W 447 nt14.53□□□□□ -0.08
HVG1P0CE11 DSK2YMR276W 1122 nt14.5□□□□□ -0.09
HVG1P0CE11 LSM3YLR438C-A 270 nt14.49□□□□□ -0.09
HVG1P0CE11 ADO1YJR105W 1023 nt14.48□□□□□ -0.09
HVG1P0CE11 YLR236CYLR236C 324 nt14.44□□□□□ -0.1
HVG1P0CE11 PUT4YOR348C 1884 nt14.44□□□□□ -0.1
HVG1P0CE11 ARE1YCR048W 1833 nt14.42□□□□□ -0.1
HVG1P0CE11 PTC2YER089C 1395 nt14.39□□□□□ -0.11
HVG1P0CE11 IMP2'YIL154C 1041 nt14.38□□□□□ -0.11
HVG1P0CE11 YEL076C-AYEL076C-A 651 nt14.36□□□□□ -0.11
HVG1P0CE11 YEL076CYEL076C 651 nt14.36□□□□□ -0.11
HVG1P0CE11 YLR464WYLR464W 651 nt14.36□□□□□ -0.11
HVG1P0CE11 YHR049C-AYHR049C-A 297 nt14.26□□□□□ -0.13
HVG1P0CE11 YLR154C-GYLR154C-G 150 nt14.22□□□□□ -0.13
HVG1P0CE11 SPP1YPL138C 1062 nt14.22□□□□□ -0.13
HVG1P0CE11 INM2YDR287W 879 nt14.21□□□□□ -0.13
HVG1P0CE11 TRM9YML014W 840 nt14.19□□□□□ -0.14
HVG1P0CE11 YBL100CYBL100C 315 nt14.19□□□□□ -0.14
HVG1P0CE11 RTG1YOL067C 534 nt14.19□□□□□ -0.14
HVG1P0CE11 SIS1YNL007C 1059 nt14.18□□□□□ -0.14
Retrieved 100 of 7,029 protein–RNA pairs in 15.2 ms