Protein–RNA interactions for Protein: O13559

YRF1-4, Y' element ATP-dependent helicase protein 1 copy 4, yeastyeast

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YRF1-4O13559 YML009W-BYML009W-B 477 nt26.49■■□□□ 1.83
YRF1-4O13559 NOP1YDL014W 984 nt25.87■■□□□ 1.73
YRF1-4O13559 NSR1YGR159C 1245 nt25.81■■□□□ 1.72
YRF1-4O13559 YKL036CYKL036C 393 nt24.54■■□□□ 1.52
YRF1-4O13559 MDJ1YFL016C 1536 nt23.04■■□□□ 1.28
YRF1-4O13559 YJL027CYJL027C 417 nt23.01■■□□□ 1.27
YRF1-4O13559 Q0297Q0297 156 nt22.93■■□□□ 1.26
YRF1-4O13559 SCS3YGL126W 1143 nt22.73■■□□□ 1.23
YRF1-4O13559 SRX1YKL086W 384 nt22.7■■□□□ 1.22
YRF1-4O13559 YCR051WYCR051W 669 nt21.57■■□□□ 1.04
YRF1-4O13559 YOL085CYOL085C 342 nt21.23■□□□□ 0.99
YRF1-4O13559 PKP1YIL042C 1185 nt20.89■□□□□ 0.93
YRF1-4O13559 SCJ1YMR214W 1134 nt20.82■□□□□ 0.92
YRF1-4O13559 RPP1BYDL130W 321 nt20.57■□□□□ 0.88
YRF1-4O13559 ATS1YAL020C 1002 nt20.44■□□□□ 0.86
YRF1-4O13559 DBP2YNL112W 1641 nt20.38■□□□□ 0.85
YRF1-4O13559 TRN1tP(UGG)A 72 nt20.21■□□□□ 0.83
YRF1-4O13559 SUF9tP(UGG)F 72 nt20.21■□□□□ 0.83
YRF1-4O13559 SUF8tP(UGG)H 72 nt20.21■□□□□ 0.83
YRF1-4O13559 tP(UGG)LtP(UGG)L 72 nt20.21■□□□□ 0.83
YRF1-4O13559 SUF7tP(UGG)M 72 nt20.21■□□□□ 0.83
YRF1-4O13559 tP(UGG)N1tP(UGG)N1 72 nt20.21■□□□□ 0.83
YRF1-4O13559 tP(UGG)N2tP(UGG)N2 72 nt20.21■□□□□ 0.83
YRF1-4O13559 tP(UGG)O1tP(UGG)O1 72 nt20.21■□□□□ 0.83
YRF1-4O13559 SUF11tP(UGG)O2 72 nt20.21■□□□□ 0.83
YRF1-4O13559 CCC1YLR220W 969 nt20.08■□□□□ 0.8
YRF1-4O13559 PET122YER153C 765 nt19.64■□□□□ 0.73
YRF1-4O13559 SCR1SCR1 522 nt19.5■□□□□ 0.71
YRF1-4O13559 YBR190WYBR190W 312 nt19.32■□□□□ 0.68
YRF1-4O13559 tP(UGG)O3tP(UGG)O3 72 nt19.28■□□□□ 0.68
YRF1-4O13559 RRN5YLR141W 1092 nt19.08■□□□□ 0.65
YRF1-4O13559 RVS167YDR388W 1449 nt19.07■□□□□ 0.64
YRF1-4O13559 RTC3YHR087W 336 nt19.04■□□□□ 0.64
YRF1-4O13559 RSB1YOR049C 1065 nt18.89■□□□□ 0.61
YRF1-4O13559 PST2YDR032C 597 nt18.82■□□□□ 0.6
YRF1-4O13559 YER088W-BYER088W-B 147 nt18.73■□□□□ 0.59
YRF1-4O13559 YDJ1YNL064C 1230 nt18.61■□□□□ 0.57
YRF1-4O13559 SHR5YOL110W 714 nt18.5■□□□□ 0.55
YRF1-4O13559 YKL097CYKL097C 411 nt18.42■□□□□ 0.54
YRF1-4O13559 GAR1YHR089C 618 nt18.16■□□□□ 0.5
YRF1-4O13559 DEP1YAL013W 1218 nt18.11■□□□□ 0.49
YRF1-4O13559 SHU1YHL006C 453 nt17.96■□□□□ 0.47
YRF1-4O13559 URN1YPR152C 1398 nt17.93■□□□□ 0.46
YRF1-4O13559 YOR139CYOR139C 393 nt17.64■□□□□ 0.41
YRF1-4O13559 YNL208WYNL208W 600 nt17.62■□□□□ 0.41
YRF1-4O13559 RPN10YHR200W 807 nt17.55■□□□□ 0.4
YRF1-4O13559 OPI9YLR338W 858 nt17.52■□□□□ 0.39
YRF1-4O13559 TIR1YER011W 765 nt17.49■□□□□ 0.39
YRF1-4O13559 YAL037C-BYAL037C-B 975 nt17.49■□□□□ 0.39
YRF1-4O13559 SAH1YER043C 1350 nt17.48■□□□□ 0.39
YRF1-4O13559 PUT4YOR348C 1884 nt17.47■□□□□ 0.39
YRF1-4O13559 SSA1YAL005C 1929 nt17.28■□□□□ 0.36
YRF1-4O13559 NPL3YDR432W 1245 nt17.27■□□□□ 0.35
YRF1-4O13559 ARE1YCR048W 1833 nt17.26■□□□□ 0.35
YRF1-4O13559 SRB2YHR041C 633 nt17.21■□□□□ 0.35
YRF1-4O13559 YHR049C-AYHR049C-A 297 nt17.13■□□□□ 0.33
YRF1-4O13559 YJR018WYJR018W 363 nt17.05■□□□□ 0.32
YRF1-4O13559 MNP1YGL068W 585 nt17.02■□□□□ 0.31
YRF1-4O13559 POA1YBR022W 534 nt17.01■□□□□ 0.31
YRF1-4O13559 YJR120WYJR120W 351 nt17■□□□□ 0.31
YRF1-4O13559 PUN1YLR414C 792 nt16.98■□□□□ 0.31
YRF1-4O13559 HOM6YJR139C 1080 nt16.93■□□□□ 0.3
YRF1-4O13559 YGR021WYGR021W 873 nt16.89■□□□□ 0.3
YRF1-4O13559 YOL037CYOL037C 354 nt16.89■□□□□ 0.3
YRF1-4O13559 WWM1YFL010C 636 nt16.86■□□□□ 0.29
YRF1-4O13559 PTC2YER089C 1395 nt16.84■□□□□ 0.29
YRF1-4O13559 tM(CAU)CtM(CAU)C 72 nt16.83■□□□□ 0.28
YRF1-4O13559 IMT4tM(CAU)E 72 nt16.83■□□□□ 0.28
YRF1-4O13559 IMT3tM(CAU)J3 72 nt16.83■□□□□ 0.28
YRF1-4O13559 IMT1tM(CAU)O1 72 nt16.83■□□□□ 0.28
YRF1-4O13559 IMT2tM(CAU)P 72 nt16.83■□□□□ 0.28
YRF1-4O13559 BUD23YCR047C 828 nt16.75■□□□□ 0.27
YRF1-4O13559 RPP2BYDR382W 333 nt16.71■□□□□ 0.27
YRF1-4O13559 BSC6YOL137W 1494 nt16.68■□□□□ 0.26
YRF1-4O13559 RKM5YLR137W 1104 nt16.67■□□□□ 0.26
YRF1-4O13559 YFL021C-AYFL021C-A 855 nt16.53■□□□□ 0.24
YRF1-4O13559 SSA3YBL075C 1950 nt16.52■□□□□ 0.23
YRF1-4O13559 NAB2YGL122C 1578 nt16.48■□□□□ 0.23
YRF1-4O13559 MOT3YMR070W 1473 nt16.48■□□□□ 0.23
YRF1-4O13559 PUS2YGL063W 1113 nt16.47■□□□□ 0.23
YRF1-4O13559 FIS1YIL065C 468 nt16.47■□□□□ 0.23
YRF1-4O13559 FPR4YLR449W 1179 nt16.47■□□□□ 0.23
YRF1-4O13559 BDH2YAL061W 1254 nt16.45■□□□□ 0.22
YRF1-4O13559 YLR281CYLR281C 468 nt16.44■□□□□ 0.22
YRF1-4O13559 DAL1YIR027C 1383 nt16.35■□□□□ 0.21
YRF1-4O13559 YBL100CYBL100C 315 nt16.34■□□□□ 0.21
YRF1-4O13559 PHO4YFR034C 939 nt16.29■□□□□ 0.2
YRF1-4O13559 WHI5YOR083W 888 nt16.28■□□□□ 0.2
YRF1-4O13559 INM2YDR287W 879 nt16.27■□□□□ 0.2
YRF1-4O13559 LSM3YLR438C-A 270 nt16.21■□□□□ 0.19
YRF1-4O13559 FUN26YAL022C 1554 nt16.13■□□□□ 0.17
YRF1-4O13559 FMP45YDL222C 930 nt16.11■□□□□ 0.17
YRF1-4O13559 YPR011CYPR011C 981 nt16.09■□□□□ 0.17
YRF1-4O13559 YLR236CYLR236C 324 nt16.07■□□□□ 0.16
YRF1-4O13559 TRM9YML014W 840 nt16.05■□□□□ 0.16
YRF1-4O13559 DSK2YMR276W 1122 nt16.03■□□□□ 0.16
YRF1-4O13559 MRPL8YJL063C 717 nt16■□□□□ 0.15
YRF1-4O13559 YCH1YGR203W 447 nt15.94■□□□□ 0.14
YRF1-4O13559 CCT6YDR188W 1641 nt15.9■□□□□ 0.14
YRF1-4O13559 IMP2'YIL154C 1041 nt15.87■□□□□ 0.13
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms