Protein–RNA interactions for Protein: P35995

YKL222C, Uncharacterized transcriptional regulatory protein YKL222C, yeastyeast

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YKL222CP35995 YML009W-BYML009W-B 477 nt25.28■■□□□ 1.64
YKL222CP35995 NOP1YDL014W 984 nt24.89■■□□□ 1.58
YKL222CP35995 NSR1YGR159C 1245 nt24.47■■□□□ 1.51
YKL222CP35995 YKL036CYKL036C 393 nt23.61■■□□□ 1.37
YKL222CP35995 YJL027CYJL027C 417 nt22.19■■□□□ 1.14
YKL222CP35995 Q0297Q0297 156 nt21.96■■□□□ 1.11
YKL222CP35995 SCS3YGL126W 1143 nt21.82■■□□□ 1.08
YKL222CP35995 SRX1YKL086W 384 nt21.71■■□□□ 1.07
YKL222CP35995 MDJ1YFL016C 1536 nt21.04■□□□□ 0.96
YKL222CP35995 YCR051WYCR051W 669 nt20.7■□□□□ 0.9
YKL222CP35995 YOL085CYOL085C 342 nt20.4■□□□□ 0.86
YKL222CP35995 SCJ1YMR214W 1134 nt20.24■□□□□ 0.83
YKL222CP35995 PKP1YIL042C 1185 nt20.04■□□□□ 0.8
YKL222CP35995 RPP1BYDL130W 321 nt19.73■□□□□ 0.75
YKL222CP35995 ATS1YAL020C 1002 nt19.73■□□□□ 0.75
YKL222CP35995 TRN1tP(UGG)A 72 nt19.17■□□□□ 0.66
YKL222CP35995 SUF9tP(UGG)F 72 nt19.17■□□□□ 0.66
YKL222CP35995 SUF8tP(UGG)H 72 nt19.17■□□□□ 0.66
YKL222CP35995 tP(UGG)LtP(UGG)L 72 nt19.17■□□□□ 0.66
YKL222CP35995 SUF7tP(UGG)M 72 nt19.17■□□□□ 0.66
YKL222CP35995 tP(UGG)N1tP(UGG)N1 72 nt19.17■□□□□ 0.66
YKL222CP35995 tP(UGG)N2tP(UGG)N2 72 nt19.17■□□□□ 0.66
YKL222CP35995 tP(UGG)O1tP(UGG)O1 72 nt19.17■□□□□ 0.66
YKL222CP35995 SUF11tP(UGG)O2 72 nt19.17■□□□□ 0.66
YKL222CP35995 CCC1YLR220W 969 nt19.07■□□□□ 0.64
YKL222CP35995 DBP2YNL112W 1641 nt18.85■□□□□ 0.61
YKL222CP35995 SCR1SCR1 522 nt18.82■□□□□ 0.6
YKL222CP35995 PET122YER153C 765 nt18.75■□□□□ 0.59
YKL222CP35995 RTC3YHR087W 336 nt18.43■□□□□ 0.54
YKL222CP35995 tP(UGG)O3tP(UGG)O3 72 nt18.41■□□□□ 0.54
YKL222CP35995 RRN5YLR141W 1092 nt18.31■□□□□ 0.52
YKL222CP35995 RSB1YOR049C 1065 nt18.17■□□□□ 0.5
YKL222CP35995 PST2YDR032C 597 nt18.13■□□□□ 0.49
YKL222CP35995 RVS167YDR388W 1449 nt18.01■□□□□ 0.47
YKL222CP35995 YER088W-BYER088W-B 147 nt17.94■□□□□ 0.46
YKL222CP35995 YKL097CYKL097C 411 nt17.84■□□□□ 0.45
YKL222CP35995 YDJ1YNL064C 1230 nt17.78■□□□□ 0.44
YKL222CP35995 YBR190WYBR190W 312 nt17.76■□□□□ 0.43
YKL222CP35995 SHR5YOL110W 714 nt17.5■□□□□ 0.39
YKL222CP35995 GAR1YHR089C 618 nt17.32■□□□□ 0.36
YKL222CP35995 SHU1YHL006C 453 nt17.23■□□□□ 0.35
YKL222CP35995 YOR139CYOR139C 393 nt16.94■□□□□ 0.3
YKL222CP35995 DEP1YAL013W 1218 nt16.79■□□□□ 0.28
YKL222CP35995 YAL037C-BYAL037C-B 975 nt16.78■□□□□ 0.28
YKL222CP35995 NPL3YDR432W 1245 nt16.71■□□□□ 0.27
YKL222CP35995 TIR1YER011W 765 nt16.69■□□□□ 0.26
YKL222CP35995 YNL208WYNL208W 600 nt16.6■□□□□ 0.25
YKL222CP35995 URN1YPR152C 1398 nt16.58■□□□□ 0.24
YKL222CP35995 RPN10YHR200W 807 nt16.53■□□□□ 0.24
YKL222CP35995 SSA1YAL005C 1929 nt16.3■□□□□ 0.2
YKL222CP35995 tM(CAU)CtM(CAU)C 72 nt16.24■□□□□ 0.19
YKL222CP35995 IMT4tM(CAU)E 72 nt16.24■□□□□ 0.19
YKL222CP35995 IMT3tM(CAU)J3 72 nt16.24■□□□□ 0.19
YKL222CP35995 IMT1tM(CAU)O1 72 nt16.24■□□□□ 0.19
YKL222CP35995 IMT2tM(CAU)P 72 nt16.24■□□□□ 0.19
YKL222CP35995 YGR021WYGR021W 873 nt16.22■□□□□ 0.19
YKL222CP35995 YOL037CYOL037C 354 nt16.22■□□□□ 0.19
YKL222CP35995 MNP1YGL068W 585 nt16.19■□□□□ 0.18
YKL222CP35995 OPI9YLR338W 858 nt16.16■□□□□ 0.18
YKL222CP35995 HOM6YJR139C 1080 nt16.15■□□□□ 0.18
YKL222CP35995 SRB2YHR041C 633 nt16.11■□□□□ 0.17
YKL222CP35995 WWM1YFL010C 636 nt16.07■□□□□ 0.16
YKL222CP35995 BSC6YOL137W 1494 nt15.93■□□□□ 0.14
YKL222CP35995 RKM5YLR137W 1104 nt15.93■□□□□ 0.14
YKL222CP35995 MOT3YMR070W 1473 nt15.91■□□□□ 0.14
YKL222CP35995 PUS2YGL063W 1113 nt15.9■□□□□ 0.14
YKL222CP35995 SAH1YER043C 1350 nt15.88■□□□□ 0.13
YKL222CP35995 YJR018WYJR018W 363 nt15.86■□□□□ 0.13
YKL222CP35995 YFL021C-AYFL021C-A 855 nt15.8■□□□□ 0.12
YKL222CP35995 RPP2BYDR382W 333 nt15.79■□□□□ 0.12
YKL222CP35995 YLR281CYLR281C 468 nt15.78■□□□□ 0.12
YKL222CP35995 PUN1YLR414C 792 nt15.72■□□□□ 0.11
YKL222CP35995 YJR120WYJR120W 351 nt15.67■□□□□ 0.1
YKL222CP35995 WHI5YOR083W 888 nt15.64■□□□□ 0.09
YKL222CP35995 MRPL8YJL063C 717 nt15.54■□□□□ 0.08
YKL222CP35995 BDH2YAL061W 1254 nt15.54■□□□□ 0.08
YKL222CP35995 PUT4YOR348C 1884 nt15.52■□□□□ 0.07
YKL222CP35995 FMP45YDL222C 930 nt15.5■□□□□ 0.07
YKL222CP35995 SSA3YBL075C 1950 nt15.48■□□□□ 0.07
YKL222CP35995 LSM3YLR438C-A 270 nt15.48■□□□□ 0.07
YKL222CP35995 ARE1YCR048W 1833 nt15.47■□□□□ 0.07
YKL222CP35995 PTC2YER089C 1395 nt15.41■□□□□ 0.06
YKL222CP35995 DSK2YMR276W 1122 nt15.39■□□□□ 0.05
YKL222CP35995 YCH1YGR203W 447 nt15.38■□□□□ 0.05
YKL222CP35995 YPR011CYPR011C 981 nt15.35■□□□□ 0.05
YKL222CP35995 IMP2'YIL154C 1041 nt15.31■□□□□ 0.04
YKL222CP35995 YHR049C-AYHR049C-A 297 nt15.3■□□□□ 0.04
YKL222CP35995 ADO1YJR105W 1023 nt15.3■□□□□ 0.04
YKL222CP35995 YLR236CYLR236C 324 nt15.27■□□□□ 0.04
YKL222CP35995 UBX6YJL048C 1191 nt15.26■□□□□ 0.03
YKL222CP35995 INM2YDR287W 879 nt15.22■□□□□ 0.03
YKL222CP35995 YBL100CYBL100C 315 nt15.18■□□□□ 0.02
YKL222CP35995 TRM9YML014W 840 nt15.17■□□□□ 0.02
YKL222CP35995 YEL076C-AYEL076C-A 651 nt15.16■□□□□ 0.02
YKL222CP35995 YEL076CYEL076C 651 nt15.16■□□□□ 0.02
YKL222CP35995 YLR464WYLR464W 651 nt15.16■□□□□ 0.02
YKL222CP35995 POA1YBR022W 534 nt15.15■□□□□ 0.02
YKL222CP35995 YLR154C-GYLR154C-G 150 nt15.13■□□□□ 0.01
YKL222CP35995 NAB2YGL122C 1578 nt15.11■□□□□ 0.01
YKL222CP35995 FPR4YLR449W 1179 nt15.09■□□□□ 0.01
Retrieved 100 of 7,029 protein–RNA pairs in 9.2 ms