RNA–Protein interactions for RNA: YLL039C

UBI4, Transcript of Ubiquitin, yeastyeast

Gene UBI4, Length 1,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBI4YLL039C TYS1P36421 394 aaKnown RBP6.46□□□□□ -1.38
UBI4YLL039C VMR1P38735 1592 aa6.46□□□□□ -1.38
UBI4YLL039C KXD1P53158 218 aa6.46□□□□□ -1.38
UBI4YLL039C HST3P53687 447 aa6.46□□□□□ -1.38
UBI4YLL039C YDR444WQ04093 687 aa6.46□□□□□ -1.38
UBI4YLL039C GCN2P15442 1659 aa6.45□□□□□ -1.38
UBI4YLL039C HXT10P43581 546 aa6.45□□□□□ -1.38
UBI4YLL039C FPK1P53739 893 aa6.45□□□□□ -1.38
UBI4YLL039C PDC1P06169 563 aaKnown RBP6.44□□□□□ -1.38
UBI4YLL039C RRD1P40454 393 aaKnown RBP6.44□□□□□ -1.38
UBI4YLL039C HAP1P0CE41 1502 aa6.44□□□□□ -1.38
UBI4YLL039C SLY41P22215 453 aa6.43□□□□□ -1.38
UBI4YLL039C LCB5Q06147 687 aaKnown RBP6.43□□□□□ -1.38
UBI4YLL039C IML1P47170 1584 aa6.43□□□□□ -1.38
UBI4YLL039C PDR5P33302 1511 aaKnown RBP6.42□□□□□ -1.38
UBI4YLL039C YJR115WP47152 169 aa6.42□□□□□ -1.38
UBI4YLL039C YDL176WQ12027 708 aa6.41□□□□□ -1.38
UBI4YLL039C YMR196WQ04336 1088 aa6.4□□□□□ -1.38
UBI4YLL039C PDR11P40550 1411 aa6.4□□□□□ -1.39
UBI4YLL039C USO1P25386 1790 aa6.39□□□□□ -1.39
UBI4YLL039C SCJ1P25303 377 aa6.39□□□□□ -1.39
UBI4YLL039C SYH1Q02875 849 aaKnown RBP6.39□□□□□ -1.39
UBI4YLL039C MSB3P48566 633 aaPredicted RBP6.38□□□□□ -1.39
UBI4YLL039C RPA14P50106 137 aa6.38□□□□□ -1.39
UBI4YLL039C PUS6P53294 404 aa6.38□□□□□ -1.39
UBI4YLL039C PAF1P38351 445 aa6.37□□□□□ -1.39
UBI4YLL039C HST2P53686 357 aa6.37□□□□□ -1.39
UBI4YLL039C YPR097WQ06839 1073 aa6.37□□□□□ -1.39
UBI4YLL039C YDL206WQ12424 762 aa6.37□□□□□ -1.39
UBI4YLL039C TRM1P15565 570 aaKnown RBP6.35□□□□□ -1.39
UBI4YLL039C ALR1Q08269 859 aa6.35□□□□□ -1.39
UBI4YLL039C RAV1P47104 1357 aa6.34□□□□□ -1.39
UBI4YLL039C TY1B-NL2Q99337 1749 aaKnown RBP6.34□□□□□ -1.39
UBI4YLL039C TBF1Q02457 562 aa6.34□□□□□ -1.39
UBI4YLL039C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.33□□□□□ -1.4not detected
UBI4YLL039C KIP2P28743 706 aa6.32□□□□□ -1.4
UBI4YLL039C MMP1Q12372 583 aa6.32□□□□□ -1.4
UBI4YLL039C RTC1Q08281 1341 aa6.31□□□□□ -1.4
UBI4YLL039C UGA3P26370 528 aa6.31□□□□□ -1.4
UBI4YLL039C MRT4P33201 236 aaKnown RBP6.31□□□□□ -1.4
UBI4YLL039C IXR1P33417 597 aa6.31□□□□□ -1.4
UBI4YLL039C NOP7P53261 605 aaKnown RBP6.31□□□□□ -1.4
UBI4YLL039C THI12P42883 340 aa6.3□□□□□ -1.4
UBI4YLL039C THI5P43534 340 aa6.3□□□□□ -1.4
UBI4YLL039C PTK2P47116 818 aaKnown RBP6.3□□□□□ -1.4
UBI4YLL039C THI11P47183 340 aa6.3□□□□□ -1.4
UBI4YLL039C THI13Q07748 340 aa6.3□□□□□ -1.4
UBI4YLL039C GLN1P32288 370 aaKnown RBP6.29□□□□□ -1.4
UBI4YLL039C ATF2P53296 535 aa6.29□□□□□ -1.4
UBI4YLL039C ESS1P22696 170 aa6.28□□□□□ -1.4
UBI4YLL039C MRX12P47084 519 aa6.28□□□□□ -1.4
UBI4YLL039C OPT2Q06593 877 aa6.28□□□□□ -1.4
UBI4YLL039C KRE5P22023 1365 aa6.28□□□□□ -1.4
UBI4YLL039C CFT1Q06632 1357 aaKnown RBP6.28□□□□□ -1.4
UBI4YLL039C BCK1Q01389 1478 aa6.28□□□□□ -1.4
UBI4YLL039C YJU3P28321 313 aa6.27□□□□□ -1.41
UBI4YLL039C ACO2P39533 789 aa6.27□□□□□ -1.41
UBI4YLL039C ALD4P46367 519 aaKnown RBP6.27□□□□□ -1.41
UBI4YLL039C YNR021WP53723 404 aaKnown RBP6.27□□□□□ -1.41
UBI4YLL039C RIA1P53893 1110 aa6.27□□□□□ -1.41
UBI4YLL039C NUP192P47054 1683 aa6.26□□□□□ -1.41
UBI4YLL039C GLC3P32775 704 aa6.26□□□□□ -1.41
UBI4YLL039C RAD9P14737 1309 aa6.25□□□□□ -1.41
UBI4YLL039C RSC30P38781 883 aa6.25□□□□□ -1.41
UBI4YLL039C CAF120P53836 1060 aa6.25□□□□□ -1.41
UBI4YLL039C TYW1Q08960 810 aaKnown RBP6.25□□□□□ -1.41
UBI4YLL039C SRF1Q12516 437 aa6.25□□□□□ -1.41
UBI4YLL039C VAC17P25591 423 aa6.24□□□□□ -1.41
UBI4YLL039C NUP85P46673 744 aa6.24□□□□□ -1.41
UBI4YLL039C YNR029CP53729 429 aaKnown RBP6.24□□□□□ -1.41
UBI4YLL039C CAB1Q04430 367 aa6.24□□□□□ -1.41
UBI4YLL039C ESL2P36168 1195 aa6.23□□□□□ -1.41
UBI4YLL039C KTR1P27810 393 aaKnown RBP6.22□□□□□ -1.41
UBI4YLL039C GLY1P37303 387 aaKnown RBP6.22□□□□□ -1.41
UBI4YLL039C YLR346CQ06139 101 aa6.22□□□□□ -1.41
UBI4YLL039C TAF5P38129 798 aa6.21□□□□□ -1.42
UBI4YLL039C YBL086CP38177 466 aa6.19□□□□□ -1.42
UBI4YLL039C NAP1P25293 417 aaKnown RBP6.18□□□□□ -1.42
UBI4YLL039C TAF8Q03750 510 aa6.18□□□□□ -1.42
UBI4YLL039C TY1A-BLQ12266 440 aa6.18□□□□□ -1.42
UBI4YLL039C MIP1P15801 1254 aa6.17□□□□□ -1.42
UBI4YLL039C YIR007WP40566 764 aa6.17□□□□□ -1.42
UBI4YLL039C AAD14P42884 376 aa6.17□□□□□ -1.42
UBI4YLL039C PKH3Q03306 898 aaPredicted RBP6.17□□□□□ -1.42
UBI4YLL039C ARG82P07250 355 aa6.16□□□□□ -1.42
UBI4YLL039C SCW11P53189 542 aa6.16□□□□□ -1.42
UBI4YLL039C AIM7Q12156 149 aa6.16□□□□□ -1.42
UBI4YLL039C EMW1P42842 904 aaKnown RBP6.15□□□□□ -1.42
UBI4YLL039C APP1P53933 587 aa6.15□□□□□ -1.42
UBI4YLL039C TY3B-IQ7LHG5 1498 aaKnown RBP6.15□□□□□ -1.43
UBI4YLL039C KIP3P53086 805 aaKnown RBP6.14□□□□□ -1.43
UBI4YLL039C LSC2P53312 427 aa6.14□□□□□ -1.43
UBI4YLL039C ARG8P18544 423 aa6.13□□□□□ -1.43
UBI4YLL039C SPE2P21182 396 aa6.13□□□□□ -1.43
UBI4YLL039C CPS1P27614 576 aa6.13□□□□□ -1.43
UBI4YLL039C FIG4P42837 879 aa6.13□□□□□ -1.43
UBI4YLL039C CSN12P47130 423 aa6.13□□□□□ -1.43
UBI4YLL039C RCM1P53972 490 aa6.13□□□□□ -1.43
UBI4YLL039C TRK2P28584 889 aa6.12□□□□□ -1.43
UBI4YLL039C YJR098CP47139 656 aa6.12□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms