Protein–RNA interactions for Protein: Q7LHG5

TY3B-I, Transposon Ty3-I Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY3B-IQ7LHG5 YML009W-BYML009W-B 477 nt28.24■■■□□ 2.11
TY3B-IQ7LHG5 NSR1YGR159C 1245 nt27.56■■■□□ 2
TY3B-IQ7LHG5 NOP1YDL014W 984 nt27.25■■□□□ 1.95
TY3B-IQ7LHG5 YKL036CYKL036C 393 nt25.87■■□□□ 1.73
TY3B-IQ7LHG5 MDJ1YFL016C 1536 nt24.82■■□□□ 1.56
TY3B-IQ7LHG5 YJL027CYJL027C 417 nt24.27■■□□□ 1.48
TY3B-IQ7LHG5 Q0297Q0297 156 nt24.18■■□□□ 1.46
TY3B-IQ7LHG5 SCS3YGL126W 1143 nt24.01■■□□□ 1.43
TY3B-IQ7LHG5 SRX1YKL086W 384 nt23.97■■□□□ 1.43
TY3B-IQ7LHG5 YCR051WYCR051W 669 nt22.83■■□□□ 1.25
TY3B-IQ7LHG5 YOL085CYOL085C 342 nt22.4■■□□□ 1.18
TY3B-IQ7LHG5 PKP1YIL042C 1185 nt22.15■■□□□ 1.14
TY3B-IQ7LHG5 DBP2YNL112W 1641 nt21.83■■□□□ 1.09
TY3B-IQ7LHG5 SCJ1YMR214W 1134 nt21.77■■□□□ 1.07
TY3B-IQ7LHG5 RPP1BYDL130W 321 nt21.7■■□□□ 1.06
TY3B-IQ7LHG5 TRN1tP(UGG)A 72 nt21.56■■□□□ 1.04
TY3B-IQ7LHG5 SUF9tP(UGG)F 72 nt21.56■■□□□ 1.04
TY3B-IQ7LHG5 SUF8tP(UGG)H 72 nt21.56■■□□□ 1.04
TY3B-IQ7LHG5 tP(UGG)LtP(UGG)L 72 nt21.56■■□□□ 1.04
TY3B-IQ7LHG5 SUF7tP(UGG)M 72 nt21.56■■□□□ 1.04
TY3B-IQ7LHG5 tP(UGG)N1tP(UGG)N1 72 nt21.56■■□□□ 1.04
TY3B-IQ7LHG5 tP(UGG)N2tP(UGG)N2 72 nt21.56■■□□□ 1.04
TY3B-IQ7LHG5 tP(UGG)O1tP(UGG)O1 72 nt21.56■■□□□ 1.04
TY3B-IQ7LHG5 SUF11tP(UGG)O2 72 nt21.56■■□□□ 1.04
TY3B-IQ7LHG5 ATS1YAL020C 1002 nt21.52■■□□□ 1.03
TY3B-IQ7LHG5 CCC1YLR220W 969 nt21.45■■□□□ 1.03
TY3B-IQ7LHG5 PET122YER153C 765 nt20.81■□□□□ 0.92
TY3B-IQ7LHG5 YBR190WYBR190W 312 nt20.78■□□□□ 0.92
TY3B-IQ7LHG5 SCR1SCR1 522 nt20.55■□□□□ 0.88
TY3B-IQ7LHG5 RTC3YHR087W 336 nt20.52■□□□□ 0.88
TY3B-IQ7LHG5 RVS167YDR388W 1449 nt20.45■□□□□ 0.86
TY3B-IQ7LHG5 tP(UGG)O3tP(UGG)O3 72 nt20.4■□□□□ 0.86
TY3B-IQ7LHG5 RRN5YLR141W 1092 nt20.17■□□□□ 0.82
TY3B-IQ7LHG5 RSB1YOR049C 1065 nt19.99■□□□□ 0.79
TY3B-IQ7LHG5 PST2YDR032C 597 nt19.82■□□□□ 0.76
TY3B-IQ7LHG5 YER088W-BYER088W-B 147 nt19.8■□□□□ 0.76
TY3B-IQ7LHG5 SHR5YOL110W 714 nt19.79■□□□□ 0.76
TY3B-IQ7LHG5 YDJ1YNL064C 1230 nt19.62■□□□□ 0.73
TY3B-IQ7LHG5 DEP1YAL013W 1218 nt19.46■□□□□ 0.71
TY3B-IQ7LHG5 YKL097CYKL097C 411 nt19.39■□□□□ 0.69
TY3B-IQ7LHG5 GAR1YHR089C 618 nt19.35■□□□□ 0.69
TY3B-IQ7LHG5 URN1YPR152C 1398 nt19.29■□□□□ 0.68
TY3B-IQ7LHG5 SHU1YHL006C 453 nt18.99■□□□□ 0.63
TY3B-IQ7LHG5 PUT4YOR348C 1884 nt18.87■□□□□ 0.61
TY3B-IQ7LHG5 YNL208WYNL208W 600 nt18.86■□□□□ 0.61
TY3B-IQ7LHG5 RPN10YHR200W 807 nt18.85■□□□□ 0.61
TY3B-IQ7LHG5 SAH1YER043C 1350 nt18.85■□□□□ 0.61
TY3B-IQ7LHG5 OPI9YLR338W 858 nt18.83■□□□□ 0.6
TY3B-IQ7LHG5 ARE1YCR048W 1833 nt18.63■□□□□ 0.57
TY3B-IQ7LHG5 TIR1YER011W 765 nt18.63■□□□□ 0.57
TY3B-IQ7LHG5 YOR139CYOR139C 393 nt18.63■□□□□ 0.57
TY3B-IQ7LHG5 YAL037C-BYAL037C-B 975 nt18.58■□□□□ 0.56
TY3B-IQ7LHG5 YHR049C-AYHR049C-A 297 nt18.56■□□□□ 0.56
TY3B-IQ7LHG5 SSA1YAL005C 1929 nt18.44■□□□□ 0.54
TY3B-IQ7LHG5 POA1YBR022W 534 nt18.38■□□□□ 0.53
TY3B-IQ7LHG5 SRB2YHR041C 633 nt18.34■□□□□ 0.53
TY3B-IQ7LHG5 YJR018WYJR018W 363 nt18.32■□□□□ 0.52
TY3B-IQ7LHG5 PUN1YLR414C 792 nt18.26■□□□□ 0.51
TY3B-IQ7LHG5 YJR120WYJR120W 351 nt18.22■□□□□ 0.51
TY3B-IQ7LHG5 NPL3YDR432W 1245 nt18.2■□□□□ 0.5
TY3B-IQ7LHG5 BUD23YCR047C 828 nt18.14■□□□□ 0.49
TY3B-IQ7LHG5 PTC2YER089C 1395 nt18.11■□□□□ 0.49
TY3B-IQ7LHG5 MNP1YGL068W 585 nt18.09■□□□□ 0.49
TY3B-IQ7LHG5 BSC6YOL137W 1494 nt17.99■□□□□ 0.47
TY3B-IQ7LHG5 WWM1YFL010C 636 nt17.95■□□□□ 0.46
TY3B-IQ7LHG5 RPP2BYDR382W 333 nt17.92■□□□□ 0.46
TY3B-IQ7LHG5 HOM6YJR139C 1080 nt17.91■□□□□ 0.46
TY3B-IQ7LHG5 YGR021WYGR021W 873 nt17.81■□□□□ 0.44
TY3B-IQ7LHG5 YOL037CYOL037C 354 nt17.8■□□□□ 0.44
TY3B-IQ7LHG5 NAB2YGL122C 1578 nt17.77■□□□□ 0.43
TY3B-IQ7LHG5 FIS1YIL065C 468 nt17.75■□□□□ 0.43
TY3B-IQ7LHG5 FPR4YLR449W 1179 nt17.75■□□□□ 0.43
TY3B-IQ7LHG5 tM(CAU)CtM(CAU)C 72 nt17.72■□□□□ 0.43
TY3B-IQ7LHG5 IMT4tM(CAU)E 72 nt17.72■□□□□ 0.43
TY3B-IQ7LHG5 IMT3tM(CAU)J3 72 nt17.72■□□□□ 0.43
TY3B-IQ7LHG5 IMT1tM(CAU)O1 72 nt17.72■□□□□ 0.43
TY3B-IQ7LHG5 IMT2tM(CAU)P 72 nt17.72■□□□□ 0.43
TY3B-IQ7LHG5 RKM5YLR137W 1104 nt17.63■□□□□ 0.41
TY3B-IQ7LHG5 BDH2YAL061W 1254 nt17.61■□□□□ 0.41
TY3B-IQ7LHG5 DAL1YIR027C 1383 nt17.59■□□□□ 0.41
TY3B-IQ7LHG5 PHO4YFR034C 939 nt17.57■□□□□ 0.4
TY3B-IQ7LHG5 YBL100CYBL100C 315 nt17.57■□□□□ 0.4
TY3B-IQ7LHG5 SSA3YBL075C 1950 nt17.54■□□□□ 0.4
TY3B-IQ7LHG5 YFL021C-AYFL021C-A 855 nt17.48■□□□□ 0.39
TY3B-IQ7LHG5 INM2YDR287W 879 nt17.45■□□□□ 0.38
TY3B-IQ7LHG5 PUS2YGL063W 1113 nt17.4■□□□□ 0.38
TY3B-IQ7LHG5 MOT3YMR070W 1473 nt17.36■□□□□ 0.37
TY3B-IQ7LHG5 YLR281CYLR281C 468 nt17.34■□□□□ 0.37
TY3B-IQ7LHG5 FUN26YAL022C 1554 nt17.3■□□□□ 0.36
TY3B-IQ7LHG5 LSM3YLR438C-A 270 nt17.21■□□□□ 0.35
TY3B-IQ7LHG5 WHI5YOR083W 888 nt17.21■□□□□ 0.35
TY3B-IQ7LHG5 TRM9YML014W 840 nt17.18■□□□□ 0.34
TY3B-IQ7LHG5 YLR236CYLR236C 324 nt17.07■□□□□ 0.32
TY3B-IQ7LHG5 YPR011CYPR011C 981 nt17.07■□□□□ 0.32
TY3B-IQ7LHG5 YPS1YLR120C 1710 nt17.07■□□□□ 0.32
TY3B-IQ7LHG5 ALF1YNL148C 765 nt17.05■□□□□ 0.32
TY3B-IQ7LHG5 FMP45YDL222C 930 nt17.03■□□□□ 0.32
TY3B-IQ7LHG5 CCT6YDR188W 1641 nt17.02■□□□□ 0.32
TY3B-IQ7LHG5 YDR095CYDR095C 411 nt17.01■□□□□ 0.31
TY3B-IQ7LHG5 YHR165W-AYHR165W-A 312 nt16.98■□□□□ 0.31
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms