RNA–Protein interactions for RNA: YCR084C

TUP1, Transcript of General repressor of transcription, yeast

Gene TUP1, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TUP1	YCR084C	TFG1	P41895	735 aa	Predicted RBP	5.78	□□□□□ -1.48
TUP1	YCR084C	ALG12	P53730	551 aa		5.78	□□□□□ -1.48
TUP1	YCR084C	PUF6	Q04373	656 aa	Known RBP	5.78	□□□□□ -1.48
TUP1	YCR084C	YOL098C	Q12496	1037 aa		5.78	□□□□□ -1.48
TUP1	YCR084C	SIT4	P20604	311 aa		5.78	□□□□□ -1.48
TUP1	YCR084C	MSH3	P25336	1018 aa		5.78	□□□□□ -1.48
TUP1	YCR084C	HPC2	Q01448	625 aa		5.78	□□□□□ -1.48
TUP1	YCR084C	ATG2	P53855	1592 aa		5.78	□□□□□ -1.48
TUP1	YCR084C	GEA2	P39993	1459 aa	Known RBP	5.77	□□□□□ -1.49
TUP1	YCR084C	UGA3	P26370	528 aa		5.77	□□□□□ -1.49
TUP1	YCR084C	TPS3	P38426	1054 aa	Known RBP	5.77	□□□□□ -1.49
TUP1	YCR084C	VID30	P53076	958 aa		5.77	□□□□□ -1.49
TUP1	YCR084C	SPO71	Q03868	1245 aa		5.77	□□□□□ -1.49
TUP1	YCR084C	VTI1	Q04338	217 aa		5.77	□□□□□ -1.49
TUP1	YCR084C	SMD2	Q06217	110 aa	Known RBP	5.77	□□□□□ -1.49
TUP1	YCR084C	MTC5	Q03897	1148 aa		5.77	□□□□□ -1.49
TUP1	YCR084C	MAG2	Q06436	670 aa	Known RBP	5.77	□□□□□ -1.49
TUP1	YCR084C	ANP1	P32629	500 aa		5.76	□□□□□ -1.49
TUP1	YCR084C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	5.76	□□□□□ -1.49	not detected
TUP1	YCR084C	BDP1	P46678	594 aa		5.76	□□□□□ -1.49
TUP1	YCR084C	ITT1	Q04638	464 aa		5.76	□□□□□ -1.49
TUP1	YCR084C	SVF1	Q05515	481 aa		5.76	□□□□□ -1.49
TUP1	YCR084C	GGA1	Q06336	557 aa		5.76	□□□□□ -1.49
TUP1	YCR084C	RPO31	P04051	1460 aa		5.76	□□□□□ -1.49
TUP1	YCR084C	POL4	P25615	582 aa		5.75	□□□□□ -1.49
TUP1	YCR084C	LTV1	P34078	463 aa		5.75	□□□□□ -1.49
TUP1	YCR084C	MSH4	P40965	878 aa	Predicted RBP	5.75	□□□□□ -1.49
TUP1	YCR084C	REX2	P54964	269 aa	Known RBP	5.75	□□□□□ -1.49
TUP1	YCR084C	RUD3	Q12234	484 aa	Known RBP	5.75	□□□□□ -1.49
TUP1	YCR084C	PDR5	P33302	1511 aa	Known RBP	5.75	□□□□□ -1.49
TUP1	YCR084C	TRM3	Q07527	1436 aa		5.75	□□□□□ -1.49
TUP1	YCR084C	ARC19	P33204	171 aa	Known RBP	5.75	□□□□□ -1.49
TUP1	YCR084C	IOC3	P43596	787 aa		5.75	□□□□□ -1.49
TUP1	YCR084C	ALD3	P54114	506 aa		5.75	□□□□□ -1.49
TUP1	YCR084C	NOP14	Q99207	810 aa	Known RBP	5.75	□□□□□ -1.49
TUP1	YCR084C	TPM1	P17536	199 aa	Known RBP	5.74	□□□□□ -1.49
TUP1	YCR084C	PET123	P17558	318 aa		5.74	□□□□□ -1.49
TUP1	YCR084C	MSM1	P22438	575 aa		5.74	□□□□□ -1.49
TUP1	YCR084C	GLN1	P32288	370 aa	Known RBP	5.74	□□□□□ -1.49
TUP1	YCR084C	GLC3	P32775	704 aa		5.74	□□□□□ -1.49
TUP1	YCR084C	PPG1	P32838	368 aa		5.74	□□□□□ -1.49
TUP1	YCR084C	TEA1	P47988	759 aa		5.74	□□□□□ -1.49
TUP1	YCR084C	RIA1	P53893	1110 aa		5.74	□□□□□ -1.49
TUP1	YCR084C	NUP157	P40064	1391 aa	Known RBP	5.74	□□□□□ -1.49
TUP1	YCR084C	SEC23	P15303	768 aa	Known RBP	5.74	□□□□□ -1.49
TUP1	YCR084C	IPL1	P38991	367 aa		5.74	□□□□□ -1.49
TUP1	YCR084C	RRB1	Q04225	511 aa	Known RBP	5.74	□□□□□ -1.49
TUP1	YCR084C	ESC2	Q06340	456 aa		5.74	□□□□□ -1.49
TUP1	YCR084C	YDL144C	Q07589	356 aa		5.74	□□□□□ -1.49
TUP1	YCR084C	LSP1	Q12230	341 aa	Known RBP	5.74	□□□□□ -1.49
TUP1	YCR084C	YBT1	P32386	1661 aa		5.73	□□□□□ -1.49
TUP1	YCR084C	FOB1	O13329	566 aa		5.73	□□□□□ -1.49
TUP1	YCR084C	CLB5	P30283	435 aa		5.73	□□□□□ -1.49
TUP1	YCR084C	RPC82	P32349	654 aa		5.73	□□□□□ -1.49
TUP1	YCR084C	CDC3	P32457	520 aa	Known RBP	5.73	□□□□□ -1.49
TUP1	YCR084C	NOB1	Q08444	459 aa	Known RBP	5.73	□□□□□ -1.49
TUP1	YCR084C	TY1B-DR3	Q99231	1755 aa		5.73	□□□□□ -1.49
TUP1	YCR084C	SAC3	P46674	1301 aa		5.73	□□□□□ -1.49
TUP1	YCR084C	CDC31	P06704	161 aa	Known RBP	5.72	□□□□□ -1.49
TUP1	YCR084C	RIM101	P33400	625 aa		5.72	□□□□□ -1.49
TUP1	YCR084C	ATG19	P35193	415 aa		5.72	□□□□□ -1.49
TUP1	YCR084C	DSN1	P40568	576 aa		5.72	□□□□□ -1.49
TUP1	YCR084C	ITC1	P53125	1264 aa		5.72	□□□□□ -1.49
TUP1	YCR084C	TFB3	Q03290	321 aa		5.72	□□□□□ -1.49
TUP1	YCR084C	NFI1	Q12216	726 aa		5.72	□□□□□ -1.49
TUP1	YCR084C	GDB1	Q06625	1536 aa		5.72	□□□□□ -1.49
TUP1	YCR084C	MPH2	P0CD99	609 aa		5.72	□□□□□ -1.49
TUP1	YCR084C	PRY3	P47033	881 aa		5.72	□□□□□ -1.49
TUP1	YCR084C	SUI2	P20459	304 aa	Known RBP	5.71	□□□□□ -1.5
TUP1	YCR084C	RTT105	P40063	208 aa		5.71	□□□□□ -1.5
TUP1	YCR084C	TAN1	P53072	289 aa	Predicted RBP	5.71	□□□□□ -1.5
TUP1	YCR084C	ATG1	P53104	897 aa		5.71	□□□□□ -1.5
TUP1	YCR084C	BMS1	Q08965	1183 aa	Known RBP	5.71	□□□□□ -1.5
TUP1	YCR084C	DPS1	P04802	557 aa	Known RBP	5.71	□□□□□ -1.5
TUP1	YCR084C	NIP100	P33420	868 aa		5.71	□□□□□ -1.5
TUP1	YCR084C	STO1	P34160	861 aa	Known RBP	5.71	□□□□□ -1.5
TUP1	YCR084C	RXT2	P38255	430 aa		5.71	□□□□□ -1.5
TUP1	YCR084C	SIC1	P38634	284 aa		5.71	□□□□□ -1.5
TUP1	YCR084C	TCD1	P38756	429 aa		5.71	□□□□□ -1.5
TUP1	YCR084C	APE4	P38821	490 aa		5.71	□□□□□ -1.5
TUP1	YCR084C	LAM1	P38851	1228 aa		5.71	□□□□□ -1.5
TUP1	YCR084C	IES5	P40060	125 aa		5.71	□□□□□ -1.5
TUP1	YCR084C	BUD6	P41697	788 aa		5.71	□□□□□ -1.5
TUP1	YCR084C	VPS70	P47161	811 aa		5.71	□□□□□ -1.5
TUP1	YCR084C	GYP7	P48365	746 aa		5.71	□□□□□ -1.5
TUP1	YCR084C	HOL1	P53389	586 aa		5.71	□□□□□ -1.5
TUP1	YCR084C	LCD1	Q04377	747 aa		5.71	□□□□□ -1.5
TUP1	YCR084C	GRC3	Q07845	632 aa		5.71	□□□□□ -1.5
TUP1	YCR084C	ATE1	P16639	503 aa		5.7	□□□□□ -1.5
TUP1	YCR084C	ACP1	P32463	125 aa		5.7	□□□□□ -1.5
TUP1	YCR084C	ECM32	P32644	1121 aa	Known RBP	5.7	□□□□□ -1.5
TUP1	YCR084C	ABZ1	P37254	787 aa	Predicted RBP	5.7	□□□□□ -1.5
TUP1	YCR084C	VPS41	P38959	992 aa		5.7	□□□□□ -1.5
TUP1	YCR084C	UBP12	P39538	1254 aa		5.7	□□□□□ -1.5
TUP1	YCR084C	ARB1	P40024	610 aa	Known RBP	5.7	□□□□□ -1.5
TUP1	YCR084C	MAM1	P40065	302 aa		5.7	□□□□□ -1.5
TUP1	YCR084C	PEX21	P50091	288 aa		5.7	□□□□□ -1.5
TUP1	YCR084C	TY3B-I	Q7LHG5	1498 aa	Known RBP	5.69	□□□□□ -1.5
TUP1	YCR084C	CLN1	P20437	546 aa		5.69	□□□□□ -1.5
TUP1	YCR084C	PKC1	P24583	1151 aa		5.69	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms