Protein–RNA interactions for Protein: P17536

TPM1, Tropomyosin-1, yeastyeast

Known RBP Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TPM1P17536 YML009W-BYML009W-B 477 nt23.97■■□□□ 1.43
TPM1P17536 NSR1YGR159C 1245 nt23.89■■□□□ 1.41
TPM1P17536 NOP1YDL014W 984 nt23.35■■□□□ 1.33
TPM1P17536 YKL036CYKL036C 393 nt21.39■■□□□ 1.01
TPM1P17536 MDJ1YFL016C 1536 nt21.23■□□□□ 0.99
TPM1P17536 Q0297Q0297 156 nt20.31■□□□□ 0.84
TPM1P17536 SRX1YKL086W 384 nt20.31■□□□□ 0.84
TPM1P17536 YJL027CYJL027C 417 nt19.97■□□□□ 0.79
TPM1P17536 SCS3YGL126W 1143 nt19.36■□□□□ 0.69
TPM1P17536 YCR051WYCR051W 669 nt19.3■□□□□ 0.68
TPM1P17536 DBP2YNL112W 1641 nt18.67■□□□□ 0.58
TPM1P17536 YOL085CYOL085C 342 nt18.47■□□□□ 0.55
TPM1P17536 TRN1tP(UGG)A 72 nt18.39■□□□□ 0.53
TPM1P17536 SUF9tP(UGG)F 72 nt18.39■□□□□ 0.53
TPM1P17536 SUF8tP(UGG)H 72 nt18.39■□□□□ 0.53
TPM1P17536 tP(UGG)LtP(UGG)L 72 nt18.39■□□□□ 0.53
TPM1P17536 SUF7tP(UGG)M 72 nt18.39■□□□□ 0.53
TPM1P17536 tP(UGG)N1tP(UGG)N1 72 nt18.39■□□□□ 0.53
TPM1P17536 tP(UGG)N2tP(UGG)N2 72 nt18.39■□□□□ 0.53
TPM1P17536 tP(UGG)O1tP(UGG)O1 72 nt18.39■□□□□ 0.53
TPM1P17536 SUF11tP(UGG)O2 72 nt18.39■□□□□ 0.53
TPM1P17536 RPP1BYDL130W 321 nt18.24■□□□□ 0.51
TPM1P17536 CCC1YLR220W 969 nt18.23■□□□□ 0.51
TPM1P17536 YBR190WYBR190W 312 nt18.19■□□□□ 0.5
TPM1P17536 PKP1YIL042C 1185 nt18.18■□□□□ 0.5
TPM1P17536 RTC3YHR087W 336 nt17.82■□□□□ 0.44
TPM1P17536 RVS167YDR388W 1449 nt17.77■□□□□ 0.44
TPM1P17536 SCJ1YMR214W 1134 nt17.47■□□□□ 0.39
TPM1P17536 PET122YER153C 765 nt17.39■□□□□ 0.37
TPM1P17536 tP(UGG)O3tP(UGG)O3 72 nt17.37■□□□□ 0.37
TPM1P17536 SCR1SCR1 522 nt17.32■□□□□ 0.36
TPM1P17536 ATS1YAL020C 1002 nt17.3■□□□□ 0.36
TPM1P17536 SHR5YOL110W 714 nt17.05■□□□□ 0.32
TPM1P17536 RRN5YLR141W 1092 nt16.88■□□□□ 0.29
TPM1P17536 YDJ1YNL064C 1230 nt16.83■□□□□ 0.28
TPM1P17536 URN1YPR152C 1398 nt16.61■□□□□ 0.25
TPM1P17536 RSB1YOR049C 1065 nt16.57■□□□□ 0.24
TPM1P17536 YER088W-BYER088W-B 147 nt16.55■□□□□ 0.24
TPM1P17536 DEP1YAL013W 1218 nt16.54■□□□□ 0.24
TPM1P17536 PUT4YOR348C 1884 nt16.49■□□□□ 0.23
TPM1P17536 RPN10YHR200W 807 nt16.47■□□□□ 0.23
TPM1P17536 GAR1YHR089C 618 nt16.46■□□□□ 0.23
TPM1P17536 OPI9YLR338W 858 nt16.38■□□□□ 0.21
TPM1P17536 YNL208WYNL208W 600 nt16.34■□□□□ 0.21
TPM1P17536 SAH1YER043C 1350 nt16.26■□□□□ 0.19
TPM1P17536 ARE1YCR048W 1833 nt16.17■□□□□ 0.18
TPM1P17536 YHR049C-AYHR049C-A 297 nt16.02■□□□□ 0.16
TPM1P17536 PST2YDR032C 597 nt16■□□□□ 0.15
TPM1P17536 POA1YBR022W 534 nt16■□□□□ 0.15
TPM1P17536 PUN1YLR414C 792 nt15.96■□□□□ 0.15
TPM1P17536 TIR1YER011W 765 nt15.92■□□□□ 0.14
TPM1P17536 YJR018WYJR018W 363 nt15.84■□□□□ 0.13
TPM1P17536 SSA3YBL075C 1950 nt15.8■□□□□ 0.12
TPM1P17536 PTC2YER089C 1395 nt15.72■□□□□ 0.11
TPM1P17536 BUD23YCR047C 828 nt15.68■□□□□ 0.1
TPM1P17536 SSA1YAL005C 1929 nt15.68■□□□□ 0.1
TPM1P17536 BSC6YOL137W 1494 nt15.67■□□□□ 0.1
TPM1P17536 RPP2BYDR382W 333 nt15.6■□□□□ 0.09
TPM1P17536 NAB2YGL122C 1578 nt15.56■□□□□ 0.08
TPM1P17536 YJR120WYJR120W 351 nt15.43■□□□□ 0.06
TPM1P17536 YKL097CYKL097C 411 nt15.41■□□□□ 0.06
TPM1P17536 SHU1YHL006C 453 nt15.36■□□□□ 0.05
TPM1P17536 DAL1YIR027C 1383 nt15.34■□□□□ 0.05
TPM1P17536 INM2YDR287W 879 nt15.33■□□□□ 0.04
TPM1P17536 FPR4YLR449W 1179 nt15.32■□□□□ 0.04
TPM1P17536 SRB2YHR041C 633 nt15.28■□□□□ 0.04
TPM1P17536 FIS1YIL065C 468 nt15.26■□□□□ 0.03
TPM1P17536 BDH2YAL061W 1254 nt15.19■□□□□ 0.02
TPM1P17536 PHO4YFR034C 939 nt15.17■□□□□ 0.02
TPM1P17536 YGR021WYGR021W 873 nt15.17■□□□□ 0.02
TPM1P17536 WWM1YFL010C 636 nt15.16■□□□□ 0.02
TPM1P17536 YBL100CYBL100C 315 nt15.15■□□□□ 0.02
TPM1P17536 YAL037C-BYAL037C-B 975 nt15.14■□□□□ 0.01
TPM1P17536 HOM6YJR139C 1080 nt15□□□□□ -0.01
TPM1P17536 LSM3YLR438C-A 270 nt15□□□□□ -0.01
TPM1P17536 YFL021C-AYFL021C-A 855 nt14.99□□□□□ -0.01
TPM1P17536 TRM9YML014W 840 nt14.95□□□□□ -0.02
TPM1P17536 FUN26YAL022C 1554 nt14.94□□□□□ -0.02
TPM1P17536 SPT5YML010W 3192 nt14.91□□□□□ -0.02
TPM1P17536 MNP1YGL068W 585 nt14.9□□□□□ -0.02
TPM1P17536 YPS1YLR120C 1710 nt14.87□□□□□ -0.03
TPM1P17536 ALF1YNL148C 765 nt14.84□□□□□ -0.03
TPM1P17536 RKM5YLR137W 1104 nt14.8□□□□□ -0.04
TPM1P17536 YHR165W-AYHR165W-A 312 nt14.78□□□□□ -0.04
TPM1P17536 YDR095CYDR095C 411 nt14.77□□□□□ -0.05
TPM1P17536 CCT6YDR188W 1641 nt14.76□□□□□ -0.05
TPM1P17536 SUF2tP(AGG)C 72 nt14.74□□□□□ -0.05
TPM1P17536 SUF10tP(AGG)N 72 nt14.74□□□□□ -0.05
TPM1P17536 NPL3YDR432W 1245 nt14.73□□□□□ -0.05
TPM1P17536 MEP2YNL142W 1500 nt14.72□□□□□ -0.05
TPM1P17536 YOL037CYOL037C 354 nt14.72□□□□□ -0.05
TPM1P17536 YOR139CYOR139C 393 nt14.68□□□□□ -0.06
TPM1P17536 SSA4YER103W 1929 nt14.56□□□□□ -0.08
TPM1P17536 RPP2AYOL039W 321 nt14.53□□□□□ -0.08
TPM1P17536 SIS1YNL007C 1059 nt14.49□□□□□ -0.09
TPM1P17536 DCW1YKL046C 1350 nt14.43□□□□□ -0.1
TPM1P17536 PTP1YDL230W 1008 nt14.36□□□□□ -0.11
TPM1P17536 YMR090WYMR090W 684 nt14.35□□□□□ -0.11
TPM1P17536 YLR154C-GYLR154C-G 150 nt14.32□□□□□ -0.12
TPM1P17536 EMI2YDR516C 1503 nt14.31□□□□□ -0.12
Retrieved 100 of 7,029 protein–RNA pairs in 15.5 ms