Protein–RNA interactions for Protein: Q04338

VTI1, t-SNARE VTI1, yeastyeast

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTI1Q04338 NSR1YGR159C 1245 nt21.3■■□□□ 1
VTI1Q04338 YML009W-BYML009W-B 477 nt21.1■□□□□ 0.97
VTI1Q04338 NOP1YDL014W 984 nt20.3■□□□□ 0.84
VTI1Q04338 MDJ1YFL016C 1536 nt19.35■□□□□ 0.69
VTI1Q04338 YKL036CYKL036C 393 nt18.36■□□□□ 0.53
VTI1Q04338 YJL027CYJL027C 417 nt17.8■□□□□ 0.44
VTI1Q04338 SRX1YKL086W 384 nt17.74■□□□□ 0.43
VTI1Q04338 Q0297Q0297 156 nt17.63■□□□□ 0.41
VTI1Q04338 DBP2YNL112W 1641 nt16.93■□□□□ 0.3
VTI1Q04338 YCR051WYCR051W 669 nt16.83■□□□□ 0.28
VTI1Q04338 YBR190WYBR190W 312 nt16.56■□□□□ 0.24
VTI1Q04338 SCS3YGL126W 1143 nt16.5■□□□□ 0.23
VTI1Q04338 TRN1tP(UGG)A 72 nt16.3■□□□□ 0.2
VTI1Q04338 SUF9tP(UGG)F 72 nt16.3■□□□□ 0.2
VTI1Q04338 SUF8tP(UGG)H 72 nt16.3■□□□□ 0.2
VTI1Q04338 tP(UGG)LtP(UGG)L 72 nt16.3■□□□□ 0.2
VTI1Q04338 SUF7tP(UGG)M 72 nt16.3■□□□□ 0.2
VTI1Q04338 tP(UGG)N1tP(UGG)N1 72 nt16.3■□□□□ 0.2
VTI1Q04338 tP(UGG)N2tP(UGG)N2 72 nt16.3■□□□□ 0.2
VTI1Q04338 tP(UGG)O1tP(UGG)O1 72 nt16.3■□□□□ 0.2
VTI1Q04338 SUF11tP(UGG)O2 72 nt16.3■□□□□ 0.2
VTI1Q04338 RTC3YHR087W 336 nt16.22■□□□□ 0.19
VTI1Q04338 CCC1YLR220W 969 nt16.18■□□□□ 0.18
VTI1Q04338 YOL085CYOL085C 342 nt15.92■□□□□ 0.14
VTI1Q04338 RPP1BYDL130W 321 nt15.82■□□□□ 0.12
VTI1Q04338 RVS167YDR388W 1449 nt15.81■□□□□ 0.12
VTI1Q04338 PKP1YIL042C 1185 nt15.77■□□□□ 0.12
VTI1Q04338 SCJ1YMR214W 1134 nt15.67■□□□□ 0.1
VTI1Q04338 PUT4YOR348C 1884 nt15.38■□□□□ 0.05
VTI1Q04338 SSA3YBL075C 1950 nt15.36■□□□□ 0.05
VTI1Q04338 tP(UGG)O3tP(UGG)O3 72 nt15.29■□□□□ 0.04
VTI1Q04338 PET122YER153C 765 nt15.2■□□□□ 0.02
VTI1Q04338 SHR5YOL110W 714 nt15.15■□□□□ 0.02
VTI1Q04338 URN1YPR152C 1398 nt15.02■□□□□ -0
VTI1Q04338 ARE1YCR048W 1833 nt14.99□□□□□ -0.01
VTI1Q04338 DEP1YAL013W 1218 nt14.93□□□□□ -0.02
VTI1Q04338 SAH1YER043C 1350 nt14.91□□□□□ -0.02
VTI1Q04338 SCR1SCR1 522 nt14.9□□□□□ -0.02
VTI1Q04338 POA1YBR022W 534 nt14.9□□□□□ -0.02
VTI1Q04338 OPI9YLR338W 858 nt14.86□□□□□ -0.03
VTI1Q04338 YHR049C-AYHR049C-A 297 nt14.8□□□□□ -0.04
VTI1Q04338 YDJ1YNL064C 1230 nt14.76□□□□□ -0.05
VTI1Q04338 RRN5YLR141W 1092 nt14.73□□□□□ -0.05
VTI1Q04338 RPN10YHR200W 807 nt14.66□□□□□ -0.06
VTI1Q04338 BSC6YOL137W 1494 nt14.63□□□□□ -0.07
VTI1Q04338 ATS1YAL020C 1002 nt14.63□□□□□ -0.07
VTI1Q04338 YNL208WYNL208W 600 nt14.59□□□□□ -0.07
VTI1Q04338 GAR1YHR089C 618 nt14.56□□□□□ -0.08
VTI1Q04338 BUD23YCR047C 828 nt14.44□□□□□ -0.1
VTI1Q04338 PUN1YLR414C 792 nt14.42□□□□□ -0.1
VTI1Q04338 YER088W-BYER088W-B 147 nt14.41□□□□□ -0.1
VTI1Q04338 PTC2YER089C 1395 nt14.35□□□□□ -0.11
VTI1Q04338 YJR018WYJR018W 363 nt14.29□□□□□ -0.12
VTI1Q04338 RSB1YOR049C 1065 nt14.29□□□□□ -0.12
VTI1Q04338 SPT5YML010W 3192 nt14.23□□□□□ -0.13
VTI1Q04338 NAB2YGL122C 1578 nt14.19□□□□□ -0.14
VTI1Q04338 TIR1YER011W 765 nt14.07□□□□□ -0.16
VTI1Q04338 SSA1YAL005C 1929 nt14□□□□□ -0.17
VTI1Q04338 YJR120WYJR120W 351 nt13.99□□□□□ -0.17
VTI1Q04338 FIS1YIL065C 468 nt13.96□□□□□ -0.17
VTI1Q04338 FPR4YLR449W 1179 nt13.94□□□□□ -0.18
VTI1Q04338 SSA4YER103W 1929 nt13.93□□□□□ -0.18
VTI1Q04338 DAL1YIR027C 1383 nt13.93□□□□□ -0.18
VTI1Q04338 RPP2BYDR382W 333 nt13.88□□□□□ -0.19
VTI1Q04338 INM2YDR287W 879 nt13.82□□□□□ -0.2
VTI1Q04338 PHO4YFR034C 939 nt13.81□□□□□ -0.2
VTI1Q04338 MEP2YNL142W 1500 nt13.76□□□□□ -0.21
VTI1Q04338 SRB2YHR041C 633 nt13.71□□□□□ -0.21
VTI1Q04338 YPS1YLR120C 1710 nt13.69□□□□□ -0.22
VTI1Q04338 YBL100CYBL100C 315 nt13.64□□□□□ -0.23
VTI1Q04338 PST2YDR032C 597 nt13.62□□□□□ -0.23
VTI1Q04338 YHR165W-AYHR165W-A 312 nt13.58□□□□□ -0.24
VTI1Q04338 DCW1YKL046C 1350 nt13.58□□□□□ -0.24
VTI1Q04338 YDR095CYDR095C 411 nt13.53□□□□□ -0.24
VTI1Q04338 BDH2YAL061W 1254 nt13.53□□□□□ -0.24
VTI1Q04338 FUN26YAL022C 1554 nt13.46□□□□□ -0.25
VTI1Q04338 BDF1YLR399C 2061 nt13.43□□□□□ -0.26
VTI1Q04338 WWM1YFL010C 636 nt13.39□□□□□ -0.27
VTI1Q04338 EMI2YDR516C 1503 nt13.37□□□□□ -0.27
VTI1Q04338 TRM9YML014W 840 nt13.36□□□□□ -0.27
VTI1Q04338 ALF1YNL148C 765 nt13.36□□□□□ -0.27
VTI1Q04338 YMR090WYMR090W 684 nt13.29□□□□□ -0.28
VTI1Q04338 PTP1YDL230W 1008 nt13.28□□□□□ -0.28
VTI1Q04338 RPP2AYOL039W 321 nt13.28□□□□□ -0.28
VTI1Q04338 CAC2YML102W 1407 nt13.27□□□□□ -0.29
VTI1Q04338 LSM3YLR438C-A 270 nt13.26□□□□□ -0.29
VTI1Q04338 YBR220CYBR220C 1683 nt13.25□□□□□ -0.29
VTI1Q04338 TAT1YBR069C 1860 nt13.23□□□□□ -0.29
VTI1Q04338 CCT6YDR188W 1641 nt13.22□□□□□ -0.29
VTI1Q04338 YDL221WYDL221W 552 nt13.22□□□□□ -0.29
VTI1Q04338 SHU1YHL006C 453 nt13.18□□□□□ -0.3
VTI1Q04338 YAL037C-BYAL037C-B 975 nt13.15□□□□□ -0.3
VTI1Q04338 SIS1YNL007C 1059 nt13.15□□□□□ -0.3
VTI1Q04338 SDH1YKL148C 1923 nt13.15□□□□□ -0.3
VTI1Q04338 YFL021C-AYFL021C-A 855 nt13.14□□□□□ -0.31
VTI1Q04338 SUF2tP(AGG)C 72 nt13.14□□□□□ -0.31
VTI1Q04338 SUF10tP(AGG)N 72 nt13.14□□□□□ -0.31
VTI1Q04338 YGR021WYGR021W 873 nt13.13□□□□□ -0.31
VTI1Q04338 HOM6YJR139C 1080 nt13.1□□□□□ -0.31
VTI1Q04338 IRC15YPL017C 1500 nt13.06□□□□□ -0.32
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms