Protein–RNA interactions for Protein: Q04225

RRB1, Ribosome assembly protein RRB1, yeastyeast

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRB1Q04225 NSR1YGR159C 1245 nt21.33■■□□□ 1.01
RRB1Q04225 YML009W-BYML009W-B 477 nt20.95■□□□□ 0.94
RRB1Q04225 NOP1YDL014W 984 nt20.09■□□□□ 0.81
RRB1Q04225 MDJ1YFL016C 1536 nt19.52■□□□□ 0.72
RRB1Q04225 YKL036CYKL036C 393 nt18.05■□□□□ 0.48
RRB1Q04225 YJL027CYJL027C 417 nt17.89■□□□□ 0.45
RRB1Q04225 SRX1YKL086W 384 nt17.61■□□□□ 0.41
RRB1Q04225 Q0297Q0297 156 nt17.48■□□□□ 0.39
RRB1Q04225 DBP2YNL112W 1641 nt17.11■□□□□ 0.33
RRB1Q04225 YBR190WYBR190W 312 nt16.76■□□□□ 0.27
RRB1Q04225 YCR051WYCR051W 669 nt16.62■□□□□ 0.25
RRB1Q04225 TRN1tP(UGG)A 72 nt16.3■□□□□ 0.2
RRB1Q04225 SUF9tP(UGG)F 72 nt16.3■□□□□ 0.2
RRB1Q04225 SUF8tP(UGG)H 72 nt16.3■□□□□ 0.2
RRB1Q04225 tP(UGG)LtP(UGG)L 72 nt16.3■□□□□ 0.2
RRB1Q04225 SUF7tP(UGG)M 72 nt16.3■□□□□ 0.2
RRB1Q04225 tP(UGG)N1tP(UGG)N1 72 nt16.3■□□□□ 0.2
RRB1Q04225 tP(UGG)N2tP(UGG)N2 72 nt16.3■□□□□ 0.2
RRB1Q04225 tP(UGG)O1tP(UGG)O1 72 nt16.3■□□□□ 0.2
RRB1Q04225 SUF11tP(UGG)O2 72 nt16.3■□□□□ 0.2
RRB1Q04225 RTC3YHR087W 336 nt16.29■□□□□ 0.2
RRB1Q04225 SCS3YGL126W 1143 nt16.19■□□□□ 0.18
RRB1Q04225 SSA3YBL075C 1950 nt16.1■□□□□ 0.17
RRB1Q04225 CCC1YLR220W 969 nt16.05■□□□□ 0.16
RRB1Q04225 RVS167YDR388W 1449 nt15.78■□□□□ 0.12
RRB1Q04225 SCJ1YMR214W 1134 nt15.75■□□□□ 0.11
RRB1Q04225 PUT4YOR348C 1884 nt15.74■□□□□ 0.11
RRB1Q04225 YOL085CYOL085C 342 nt15.7■□□□□ 0.1
RRB1Q04225 RPP1BYDL130W 321 nt15.67■□□□□ 0.1
RRB1Q04225 PKP1YIL042C 1185 nt15.51■□□□□ 0.07
RRB1Q04225 ARE1YCR048W 1833 nt15.27■□□□□ 0.04
RRB1Q04225 tP(UGG)O3tP(UGG)O3 72 nt15.21■□□□□ 0.03
RRB1Q04225 SHR5YOL110W 714 nt15.17■□□□□ 0.02
RRB1Q04225 POA1YBR022W 534 nt15.13■□□□□ 0.01
RRB1Q04225 URN1YPR152C 1398 nt15.1■□□□□ 0.01
RRB1Q04225 SAH1YER043C 1350 nt15.08■□□□□ 0
RRB1Q04225 PET122YER153C 765 nt15.07■□□□□ 0
RRB1Q04225 YHR049C-AYHR049C-A 297 nt15.02■□□□□ -0
RRB1Q04225 OPI9YLR338W 858 nt15.01□□□□□ -0.01
RRB1Q04225 BSC6YOL137W 1494 nt14.94□□□□□ -0.02
RRB1Q04225 DEP1YAL013W 1218 nt14.93□□□□□ -0.02
RRB1Q04225 SPT5YML010W 3192 nt14.81□□□□□ -0.04
RRB1Q04225 YDJ1YNL064C 1230 nt14.72□□□□□ -0.05
RRB1Q04225 RPN10YHR200W 807 nt14.66□□□□□ -0.06
RRB1Q04225 SCR1SCR1 522 nt14.64□□□□□ -0.07
RRB1Q04225 YNL208WYNL208W 600 nt14.61□□□□□ -0.07
RRB1Q04225 BUD23YCR047C 828 nt14.57□□□□□ -0.08
RRB1Q04225 RRN5YLR141W 1092 nt14.55□□□□□ -0.08
RRB1Q04225 PUN1YLR414C 792 nt14.53□□□□□ -0.08
RRB1Q04225 PTC2YER089C 1395 nt14.47□□□□□ -0.09
RRB1Q04225 SSA4YER103W 1929 nt14.46□□□□□ -0.09
RRB1Q04225 GAR1YHR089C 618 nt14.45□□□□□ -0.1
RRB1Q04225 YJR018WYJR018W 363 nt14.35□□□□□ -0.11
RRB1Q04225 NAB2YGL122C 1578 nt14.34□□□□□ -0.11
RRB1Q04225 ATS1YAL020C 1002 nt14.3□□□□□ -0.12
RRB1Q04225 YER088W-BYER088W-B 147 nt14.29□□□□□ -0.12
RRB1Q04225 FIS1YIL065C 468 nt14.18□□□□□ -0.14
RRB1Q04225 YJR120WYJR120W 351 nt14.17□□□□□ -0.14
RRB1Q04225 MEP2YNL142W 1500 nt14.09□□□□□ -0.15
RRB1Q04225 DAL1YIR027C 1383 nt14.07□□□□□ -0.16
RRB1Q04225 RSB1YOR049C 1065 nt14.04□□□□□ -0.16
RRB1Q04225 BDF1YLR399C 2061 nt14.02□□□□□ -0.17
RRB1Q04225 SSA1YAL005C 1929 nt14.02□□□□□ -0.17
RRB1Q04225 TIR1YER011W 765 nt14.01□□□□□ -0.17
RRB1Q04225 PHO4YFR034C 939 nt13.96□□□□□ -0.17
RRB1Q04225 FPR4YLR449W 1179 nt13.96□□□□□ -0.17
RRB1Q04225 YPS1YLR120C 1710 nt13.9□□□□□ -0.18
RRB1Q04225 INM2YDR287W 879 nt13.89□□□□□ -0.19
RRB1Q04225 DCW1YKL046C 1350 nt13.88□□□□□ -0.19
RRB1Q04225 RPP2BYDR382W 333 nt13.84□□□□□ -0.19
RRB1Q04225 TAT1YBR069C 1860 nt13.8□□□□□ -0.2
RRB1Q04225 SRB2YHR041C 633 nt13.78□□□□□ -0.2
RRB1Q04225 YDR095CYDR095C 411 nt13.74□□□□□ -0.21
RRB1Q04225 YHR165W-AYHR165W-A 312 nt13.72□□□□□ -0.21
RRB1Q04225 YBL100CYBL100C 315 nt13.69□□□□□ -0.22
RRB1Q04225 EMI2YDR516C 1503 nt13.64□□□□□ -0.23
RRB1Q04225 YBR220CYBR220C 1683 nt13.63□□□□□ -0.23
RRB1Q04225 PTP1YDL230W 1008 nt13.55□□□□□ -0.24
RRB1Q04225 BDH2YAL061W 1254 nt13.54□□□□□ -0.24
RRB1Q04225 FUN26YAL022C 1554 nt13.53□□□□□ -0.24
RRB1Q04225 YDL221WYDL221W 552 nt13.52□□□□□ -0.25
RRB1Q04225 CAC2YML102W 1407 nt13.52□□□□□ -0.25
RRB1Q04225 YMR090WYMR090W 684 nt13.49□□□□□ -0.25
RRB1Q04225 SDH1YKL148C 1923 nt13.45□□□□□ -0.26
RRB1Q04225 RPP2AYOL039W 321 nt13.44□□□□□ -0.26
RRB1Q04225 PST2YDR032C 597 nt13.38□□□□□ -0.27
RRB1Q04225 ALF1YNL148C 765 nt13.37□□□□□ -0.27
RRB1Q04225 TRM9YML014W 840 nt13.34□□□□□ -0.27
RRB1Q04225 IRC15YPL017C 1500 nt13.34□□□□□ -0.27
RRB1Q04225 WWM1YFL010C 636 nt13.32□□□□□ -0.28
RRB1Q04225 CCT6YDR188W 1641 nt13.31□□□□□ -0.28
RRB1Q04225 SIS1YNL007C 1059 nt13.29□□□□□ -0.28
RRB1Q04225 SCC4YER147C 1875 nt13.27□□□□□ -0.28
RRB1Q04225 LSM3YLR438C-A 270 nt13.25□□□□□ -0.29
RRB1Q04225 GIS3YLR094C 1509 nt13.23□□□□□ -0.29
RRB1Q04225 PCH2YBR186W 1695 nt13.21□□□□□ -0.3
RRB1Q04225 GUT2YIL155C 1950 nt13.18□□□□□ -0.3
RRB1Q04225 NVJ2YPR091C 2313 nt13.17□□□□□ -0.3
RRB1Q04225 GFD2YCL036W 1701 nt13.16□□□□□ -0.3
RRB1Q04225 PAC11YDR488C 1602 nt13.16□□□□□ -0.3
Retrieved 100 of 7,029 protein–RNA pairs in 12.9 ms