Protein–RNA interactions for Protein: P38756

TCD1, tRNA threonylcarbamoyladenosine dehydratase 1, yeastyeast

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TCD1P38756 NSR1YGR159C 1245 nt21.62■■□□□ 1.05
TCD1P38756 YML009W-BYML009W-B 477 nt21.52■■□□□ 1.04
TCD1P38756 NOP1YDL014W 984 nt20.72■□□□□ 0.91
TCD1P38756 MDJ1YFL016C 1536 nt19.6■□□□□ 0.73
TCD1P38756 YKL036CYKL036C 393 nt18.82■□□□□ 0.6
TCD1P38756 SRX1YKL086W 384 nt18.12■□□□□ 0.49
TCD1P38756 Q0297Q0297 156 nt18.04■□□□□ 0.48
TCD1P38756 YJL027CYJL027C 417 nt18.01■□□□□ 0.47
TCD1P38756 DBP2YNL112W 1641 nt17.19■□□□□ 0.34
TCD1P38756 YCR051WYCR051W 669 nt17.19■□□□□ 0.34
TCD1P38756 SCS3YGL126W 1143 nt16.99■□□□□ 0.31
TCD1P38756 SSA3YBL075C 1950 nt16.98■□□□□ 0.31
TCD1P38756 YBR190WYBR190W 312 nt16.91■□□□□ 0.3
TCD1P38756 TRN1tP(UGG)A 72 nt16.6■□□□□ 0.25
TCD1P38756 SUF9tP(UGG)F 72 nt16.6■□□□□ 0.25
TCD1P38756 SUF8tP(UGG)H 72 nt16.6■□□□□ 0.25
TCD1P38756 tP(UGG)LtP(UGG)L 72 nt16.6■□□□□ 0.25
TCD1P38756 SUF7tP(UGG)M 72 nt16.6■□□□□ 0.25
TCD1P38756 tP(UGG)N1tP(UGG)N1 72 nt16.6■□□□□ 0.25
TCD1P38756 tP(UGG)N2tP(UGG)N2 72 nt16.6■□□□□ 0.25
TCD1P38756 tP(UGG)O1tP(UGG)O1 72 nt16.6■□□□□ 0.25
TCD1P38756 SUF11tP(UGG)O2 72 nt16.6■□□□□ 0.25
TCD1P38756 RTC3YHR087W 336 nt16.53■□□□□ 0.24
TCD1P38756 CCC1YLR220W 969 nt16.46■□□□□ 0.23
TCD1P38756 YOL085CYOL085C 342 nt16.34■□□□□ 0.21
TCD1P38756 RPP1BYDL130W 321 nt16.19■□□□□ 0.18
TCD1P38756 PKP1YIL042C 1185 nt16.17■□□□□ 0.18
TCD1P38756 RVS167YDR388W 1449 nt16.02■□□□□ 0.16
TCD1P38756 PUT4YOR348C 1884 nt15.97■□□□□ 0.15
TCD1P38756 SCJ1YMR214W 1134 nt15.95■□□□□ 0.14
TCD1P38756 tP(UGG)O3tP(UGG)O3 72 nt15.6■□□□□ 0.09
TCD1P38756 PET122YER153C 765 nt15.55■□□□□ 0.08
TCD1P38756 ARE1YCR048W 1833 nt15.43■□□□□ 0.06
TCD1P38756 POA1YBR022W 534 nt15.42■□□□□ 0.06
TCD1P38756 SHR5YOL110W 714 nt15.4■□□□□ 0.06
TCD1P38756 YHR049C-AYHR049C-A 297 nt15.27■□□□□ 0.04
TCD1P38756 BSC6YOL137W 1494 nt15.25■□□□□ 0.03
TCD1P38756 SCR1SCR1 522 nt15.23■□□□□ 0.03
TCD1P38756 URN1YPR152C 1398 nt15.21■□□□□ 0.02
TCD1P38756 SAH1YER043C 1350 nt15.2■□□□□ 0.02
TCD1P38756 DEP1YAL013W 1218 nt15.14■□□□□ 0.01
TCD1P38756 SPT5YML010W 3192 nt15.1■□□□□ 0.01
TCD1P38756 ATS1YAL020C 1002 nt15.08■□□□□ 0
TCD1P38756 OPI9YLR338W 858 nt15.07■□□□□ 0
TCD1P38756 RRN5YLR141W 1092 nt15.06■□□□□ 0
TCD1P38756 YDJ1YNL064C 1230 nt15.06■□□□□ 0
TCD1P38756 SSA4YER103W 1929 nt15.04■□□□□ -0
TCD1P38756 BUD23YCR047C 828 nt14.87□□□□□ -0.03
TCD1P38756 RPN10YHR200W 807 nt14.86□□□□□ -0.03
TCD1P38756 GAR1YHR089C 618 nt14.83□□□□□ -0.04
TCD1P38756 YNL208WYNL208W 600 nt14.81□□□□□ -0.04
TCD1P38756 YER088W-BYER088W-B 147 nt14.75□□□□□ -0.05
TCD1P38756 PUN1YLR414C 792 nt14.65□□□□□ -0.06
TCD1P38756 RSB1YOR049C 1065 nt14.64□□□□□ -0.07
TCD1P38756 PTC2YER089C 1395 nt14.6□□□□□ -0.07
TCD1P38756 NAB2YGL122C 1578 nt14.54□□□□□ -0.08
TCD1P38756 BDF1YLR399C 2061 nt14.52□□□□□ -0.09
TCD1P38756 YJR018WYJR018W 363 nt14.48□□□□□ -0.09
TCD1P38756 MEP2YNL142W 1500 nt14.41□□□□□ -0.1
TCD1P38756 TIR1YER011W 765 nt14.33□□□□□ -0.12
TCD1P38756 TAT1YBR069C 1860 nt14.31□□□□□ -0.12
TCD1P38756 SSA1YAL005C 1929 nt14.25□□□□□ -0.13
TCD1P38756 FIS1YIL065C 468 nt14.23□□□□□ -0.13
TCD1P38756 YJR120WYJR120W 351 nt14.23□□□□□ -0.13
TCD1P38756 DAL1YIR027C 1383 nt14.19□□□□□ -0.14
TCD1P38756 FPR4YLR449W 1179 nt14.16□□□□□ -0.14
TCD1P38756 DCW1YKL046C 1350 nt14.14□□□□□ -0.15
TCD1P38756 PAC11YDR488C 1602 nt14.1□□□□□ -0.15
TCD1P38756 YPS1YLR120C 1710 nt14.07□□□□□ -0.16
TCD1P38756 RPP2BYDR382W 333 nt14.06□□□□□ -0.16
TCD1P38756 PHO4YFR034C 939 nt14.05□□□□□ -0.16
TCD1P38756 PST2YDR032C 597 nt14.03□□□□□ -0.16
TCD1P38756 SRB2YHR041C 633 nt14□□□□□ -0.17
TCD1P38756 YHR165W-AYHR165W-A 312 nt14□□□□□ -0.17
TCD1P38756 INM2YDR287W 879 nt13.98□□□□□ -0.17
TCD1P38756 YMR090WYMR090W 684 nt13.98□□□□□ -0.17
TCD1P38756 YBR220CYBR220C 1683 nt13.95□□□□□ -0.18
TCD1P38756 EMI2YDR516C 1503 nt13.95□□□□□ -0.18
TCD1P38756 YDR095CYDR095C 411 nt13.83□□□□□ -0.2
TCD1P38756 YBL100CYBL100C 315 nt13.82□□□□□ -0.2
TCD1P38756 YDL221WYDL221W 552 nt13.77□□□□□ -0.21
TCD1P38756 SDH1YKL148C 1923 nt13.76□□□□□ -0.21
TCD1P38756 BDH2YAL061W 1254 nt13.74□□□□□ -0.21
TCD1P38756 WWM1YFL010C 636 nt13.67□□□□□ -0.22
TCD1P38756 PCH2YBR186W 1695 nt13.66□□□□□ -0.22
TCD1P38756 FUN26YAL022C 1554 nt13.65□□□□□ -0.22
TCD1P38756 CAC2YML102W 1407 nt13.64□□□□□ -0.23
TCD1P38756 SEC11YIR022W 504 nt13.62□□□□□ -0.23
TCD1P38756 GUT2YIL155C 1950 nt13.6□□□□□ -0.23
TCD1P38756 RPP2AYOL039W 321 nt13.6□□□□□ -0.23
TCD1P38756 NVJ2YPR091C 2313 nt13.6□□□□□ -0.23
TCD1P38756 PTP1YDL230W 1008 nt13.57□□□□□ -0.24
TCD1P38756 SCC4YER147C 1875 nt13.57□□□□□ -0.24
TCD1P38756 SHU1YHL006C 453 nt13.56□□□□□ -0.24
TCD1P38756 TRM9YML014W 840 nt13.54□□□□□ -0.24
TCD1P38756 ALF1YNL148C 765 nt13.54□□□□□ -0.24
TCD1P38756 YAL037C-BYAL037C-B 975 nt13.5□□□□□ -0.25
TCD1P38756 LSM3YLR438C-A 270 nt13.48□□□□□ -0.25
TCD1P38756 IRC15YPL017C 1500 nt13.44□□□□□ -0.26
TCD1P38756 YGR021WYGR021W 873 nt13.42□□□□□ -0.26
Retrieved 100 of 7,029 protein–RNA pairs in 469.4 ms