RNA–Protein interactions for RNA: YCR084C

TUP1, Transcript of General repressor of transcription, yeastyeast

Gene TUP1, Length 2,142 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TUP1YCR084C RQC2Q12532 1038 aaKnown RBP8.92□□□□□ -0.98
TUP1YCR084C TAF7Q05021 590 aa8.3□□□□□ -1.08
TUP1YCR084C TFA1P36100 482 aa8.21□□□□□ -1.1
TUP1YCR084C DRS1P32892 752 aaKnown RBP8.2□□□□□ -1.1
TUP1YCR084C BFR2Q06631 534 aaKnown RBP8.1□□□□□ -1.11
TUP1YCR084C URN1Q06525 465 aaKnown RBP7.69□□□□□ -1.18
TUP1YCR084C LEO1P38439 464 aa7.31□□□□□ -1.24
TUP1YCR084C IOC4Q04213 475 aa7.26□□□□□ -1.25
TUP1YCR084C NAP1P25293 417 aaKnown RBP7.25□□□□□ -1.25
TUP1YCR084C DMA1P38823 416 aa7.23□□□□□ -1.25
TUP1YCR084C SIS2P36024 562 aa7.15□□□□□ -1.26
TUP1YCR084C YFR016CP43597 1233 aaKnown RBP7.12□□□□□ -1.27
TUP1YCR084C IFH1P39520 1085 aa7.07□□□□□ -1.28
TUP1YCR084C YRB30P53107 440 aaPredicted RBP7.06□□□□□ -1.28
TUP1YCR084C SPA2P23201 1466 aaKnown RBP7.05□□□□□ -1.28
TUP1YCR084C AVT3P36062 692 aa7.04□□□□□ -1.28
TUP1YCR084C NOP2P40991 618 aaKnown RBP7.02□□□□□ -1.29
TUP1YCR084C ORC1P54784 914 aaPredicted RBP7□□□□□ -1.29
TUP1YCR084C DIP2Q12220 943 aaPredicted RBP7□□□□□ -1.29
TUP1YCR084C KRI1P42846 591 aaKnown RBP6.98□□□□□ -1.29
TUP1YCR084C EBP2P36049 427 aaKnown RBP6.97□□□□□ -1.29
TUP1YCR084C SGS1P35187 1447 aa6.96□□□□□ -1.3
TUP1YCR084C SSN2P38931 1420 aa6.93□□□□□ -1.3
TUP1YCR084C AIM44Q99299 758 aa6.92□□□□□ -1.3
TUP1YCR084C MTC1P47018 478 aaKnown RBP6.92□□□□□ -1.3
TUP1YCR084C CAB3P36076 571 aa6.89□□□□□ -1.31
TUP1YCR084C ABP1P15891 592 aaKnown RBP6.86□□□□□ -1.31
TUP1YCR084C SKI3P17883 1432 aaKnown RBP6.86□□□□□ -1.31
TUP1YCR084C RPS0BP46654 252 aaKnown RBP6.85□□□□□ -1.31
TUP1YCR084C SNU71P53207 620 aaKnown RBP6.85□□□□□ -1.31
TUP1YCR084C NSR1P27476 414 aaKnown RBP RIP-Chip data6.83□□□□□ -1.32not detected
TUP1YCR084C TOP1P04786 769 aa6.82□□□□□ -1.32
TUP1YCR084C CWC22P53333 577 aaKnown RBP6.79□□□□□ -1.32
TUP1YCR084C LEU3P08638 886 aa6.74□□□□□ -1.33
TUP1YCR084C DMA2P53924 522 aa6.7□□□□□ -1.34
TUP1YCR084C MNN4P36044 1178 aa6.68□□□□□ -1.34
TUP1YCR084C MDG1P53885 366 aa6.68□□□□□ -1.34
TUP1YCR084C RLP24Q07915 199 aaKnown RBP6.67□□□□□ -1.34
TUP1YCR084C SWE1P32944 819 aa6.65□□□□□ -1.35
TUP1YCR084C PSH1Q12161 406 aa6.64□□□□□ -1.35
TUP1YCR084C ATG36P46983 293 aa6.61□□□□□ -1.35
TUP1YCR084C INO80P53115 1489 aa6.6□□□□□ -1.35
TUP1YCR084C RLF2Q12495 606 aa6.58□□□□□ -1.36
TUP1YCR084C GIN4Q12263 1142 aa6.57□□□□□ -1.36
TUP1YCR084C SAS10Q12136 610 aaPredicted RBP6.53□□□□□ -1.36
TUP1YCR084C TPO2P53283 614 aa6.52□□□□□ -1.37
TUP1YCR084C DEF1P35732 738 aaKnown RBP6.51□□□□□ -1.37
TUP1YCR084C BRL1P38770 471 aa6.51□□□□□ -1.37
TUP1YCR084C NUG1P40010 520 aaKnown RBP6.5□□□□□ -1.37
TUP1YCR084C MMS22Q06164 1454 aa6.5□□□□□ -1.37
TUP1YCR084C TOA1P32773 286 aa6.49□□□□□ -1.37
TUP1YCR084C ENP1P38333 483 aaKnown RBP6.49□□□□□ -1.37
TUP1YCR084C SUB1P54000 292 aaKnown RBP6.48□□□□□ -1.37
TUP1YCR084C LAM6Q08001 693 aa6.48□□□□□ -1.37
TUP1YCR084C YPR148CQ06523 435 aa6.47□□□□□ -1.37
TUP1YCR084C CHD1P32657 1468 aa6.46□□□□□ -1.37
TUP1YCR084C NOP8Q08287 484 aaPredicted RBP6.46□□□□□ -1.37
TUP1YCR084C HIF1Q12373 385 aa6.46□□□□□ -1.37
TUP1YCR084C RPN1P38764 993 aaKnown RBP6.46□□□□□ -1.38
TUP1YCR084C TCB3Q03640 1545 aaKnown RBP6.45□□□□□ -1.38
TUP1YCR084C RSE1Q04693 1361 aaKnown RBP6.45□□□□□ -1.38
TUP1YCR084C ISW1P38144 1129 aa6.43□□□□□ -1.38
TUP1YCR084C UFD4P33202 1483 aa6.42□□□□□ -1.38
TUP1YCR084C JSN1P47135 1091 aaKnown RBP RIP-Chip data6.41□□□□□ -1.38not detected
TUP1YCR084C ENV11P53246 860 aa6.41□□□□□ -1.38
TUP1YCR084C YML020WQ03722 664 aa6.41□□□□□ -1.38
TUP1YCR084C SSA1P10591 642 aaKnown RBP6.39□□□□□ -1.39
TUP1YCR084C SSA2P10592 639 aaKnown RBP6.39□□□□□ -1.39
TUP1YCR084C VPS72Q03388 795 aa6.39□□□□□ -1.39
TUP1YCR084C FAR11P53917 953 aa6.38□□□□□ -1.39
TUP1YCR084C XRN1P22147 1528 aaKnown RBP6.38□□□□□ -1.39
TUP1YCR084C ASF1P32447 279 aa6.37□□□□□ -1.39
TUP1YCR084C OSW7P43611 510 aa6.35□□□□□ -1.39
TUP1YCR084C NHA1Q99271 985 aa6.35□□□□□ -1.39
TUP1YCR084C POL5P39985 1022 aaKnown RBP6.35□□□□□ -1.39
TUP1YCR084C TIF4632P39936 914 aaKnown RBP6.34□□□□□ -1.39
TUP1YCR084C BRN1P38170 754 aa6.34□□□□□ -1.4
TUP1YCR084C SSP1P38871 571 aa6.33□□□□□ -1.4
TUP1YCR084C SPP41P38904 1435 aa6.33□□□□□ -1.4
TUP1YCR084C BUD21Q08492 214 aaPredicted RBP6.32□□□□□ -1.4
TUP1YCR084C STH1P32597 1359 aa6.32□□□□□ -1.4
TUP1YCR084C SPT7P35177 1332 aa6.32□□□□□ -1.4
TUP1YCR084C TRM732Q03496 1420 aa6.31□□□□□ -1.4
TUP1YCR084C DAL5P15365 543 aa6.31□□□□□ -1.4
TUP1YCR084C RPS0AP32905 252 aaKnown RBP6.31□□□□□ -1.4
TUP1YCR084C RTS3P53289 263 aa6.31□□□□□ -1.4
TUP1YCR084C SPC42P36094 363 aa6.31□□□□□ -1.4
TUP1YCR084C IKI3Q06706 1349 aaKnown RBP6.3□□□□□ -1.4
TUP1YCR084C SPT2P06843 333 aaPredicted RBP6.29□□□□□ -1.4
TUP1YCR084C SSF1P38789 453 aaPredicted RBP6.29□□□□□ -1.4
TUP1YCR084C YJR008WP47085 338 aa6.29□□□□□ -1.4
TUP1YCR084C DOS2P54858 310 aa6.29□□□□□ -1.4
TUP1YCR084C QCR6P00127 147 aa6.28□□□□□ -1.4
TUP1YCR084C MON2P48563 1636 aaPredicted RBP6.28□□□□□ -1.4
TUP1YCR084C TAF13P11747 167 aa6.28□□□□□ -1.4
TUP1YCR084C PDR1P12383 1068 aa6.28□□□□□ -1.4
TUP1YCR084C SEC3P33332 1336 aaKnown RBP6.28□□□□□ -1.4
TUP1YCR084C GEF1P37020 779 aa6.27□□□□□ -1.41
TUP1YCR084C TLG1Q03322 224 aa6.27□□□□□ -1.41
TUP1YCR084C ZDS1P50111 915 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms