Protein–RNA interactions for Protein: P33420

NIP100, Protein NIP100, yeastyeast

Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NIP100P33420 NSR1YGR159C 1245 nt21.99■■□□□ 1.11
NIP100P33420 YML009W-BYML009W-B 477 nt21.92■■□□□ 1.1
NIP100P33420 NOP1YDL014W 984 nt21.27■■□□□ 1
NIP100P33420 MDJ1YFL016C 1536 nt19.65■□□□□ 0.74
NIP100P33420 YKL036CYKL036C 393 nt19.46■□□□□ 0.71
NIP100P33420 SRX1YKL086W 384 nt18.6■□□□□ 0.57
NIP100P33420 Q0297Q0297 156 nt18.59■□□□□ 0.57
NIP100P33420 YJL027CYJL027C 417 nt18.13■□□□□ 0.49
NIP100P33420 SCS3YGL126W 1143 nt17.62■□□□□ 0.41
NIP100P33420 YCR051WYCR051W 669 nt17.58■□□□□ 0.4
NIP100P33420 DBP2YNL112W 1641 nt17.36■□□□□ 0.37
NIP100P33420 TRN1tP(UGG)A 72 nt16.92■□□□□ 0.3
NIP100P33420 SUF9tP(UGG)F 72 nt16.92■□□□□ 0.3
NIP100P33420 SUF8tP(UGG)H 72 nt16.92■□□□□ 0.3
NIP100P33420 tP(UGG)LtP(UGG)L 72 nt16.92■□□□□ 0.3
NIP100P33420 SUF7tP(UGG)M 72 nt16.92■□□□□ 0.3
NIP100P33420 tP(UGG)N1tP(UGG)N1 72 nt16.92■□□□□ 0.3
NIP100P33420 tP(UGG)N2tP(UGG)N2 72 nt16.92■□□□□ 0.3
NIP100P33420 tP(UGG)O1tP(UGG)O1 72 nt16.92■□□□□ 0.3
NIP100P33420 SUF11tP(UGG)O2 72 nt16.92■□□□□ 0.3
NIP100P33420 YOL085CYOL085C 342 nt16.87■□□□□ 0.29
NIP100P33420 YBR190WYBR190W 312 nt16.84■□□□□ 0.29
NIP100P33420 CCC1YLR220W 969 nt16.69■□□□□ 0.26
NIP100P33420 RPP1BYDL130W 321 nt16.66■□□□□ 0.26
NIP100P33420 PKP1YIL042C 1185 nt16.59■□□□□ 0.25
NIP100P33420 RTC3YHR087W 336 nt16.4■□□□□ 0.22
NIP100P33420 RVS167YDR388W 1449 nt16.25■□□□□ 0.19
NIP100P33420 SCJ1YMR214W 1134 nt16.14■□□□□ 0.17
NIP100P33420 tP(UGG)O3tP(UGG)O3 72 nt15.94■□□□□ 0.14
NIP100P33420 PET122YER153C 765 nt15.93■□□□□ 0.14
NIP100P33420 ATS1YAL020C 1002 nt15.71■□□□□ 0.11
NIP100P33420 SCR1SCR1 522 nt15.7■□□□□ 0.1
NIP100P33420 SHR5YOL110W 714 nt15.66■□□□□ 0.1
NIP100P33420 YDJ1YNL064C 1230 nt15.45■□□□□ 0.06
NIP100P33420 RRN5YLR141W 1092 nt15.44■□□□□ 0.06
NIP100P33420 PUT4YOR348C 1884 nt15.42■□□□□ 0.06
NIP100P33420 URN1YPR152C 1398 nt15.31■□□□□ 0.04
NIP100P33420 DEP1YAL013W 1218 nt15.22■□□□□ 0.03
NIP100P33420 OPI9YLR338W 858 nt15.16■□□□□ 0.02
NIP100P33420 YER088W-BYER088W-B 147 nt15.14■□□□□ 0.01
NIP100P33420 ARE1YCR048W 1833 nt15.08■□□□□ 0.01
NIP100P33420 SSA3YBL075C 1950 nt15.08■□□□□ 0
NIP100P33420 GAR1YHR089C 618 nt15.07■□□□□ 0
NIP100P33420 SAH1YER043C 1350 nt15.07■□□□□ 0
NIP100P33420 RPN10YHR200W 807 nt15.06■□□□□ 0
NIP100P33420 RSB1YOR049C 1065 nt15.05■□□□□ -0
NIP100P33420 YNL208WYNL208W 600 nt15.01□□□□□ -0.01
NIP100P33420 POA1YBR022W 534 nt14.89□□□□□ -0.03
NIP100P33420 YHR049C-AYHR049C-A 297 nt14.87□□□□□ -0.03
NIP100P33420 PUN1YLR414C 792 nt14.71□□□□□ -0.05
NIP100P33420 BSC6YOL137W 1494 nt14.62□□□□□ -0.07
NIP100P33420 TIR1YER011W 765 nt14.61□□□□□ -0.07
NIP100P33420 YJR018WYJR018W 363 nt14.61□□□□□ -0.07
NIP100P33420 PST2YDR032C 597 nt14.59□□□□□ -0.07
NIP100P33420 PTC2YER089C 1395 nt14.53□□□□□ -0.08
NIP100P33420 BUD23YCR047C 828 nt14.48□□□□□ -0.09
NIP100P33420 SSA1YAL005C 1929 nt14.47□□□□□ -0.09
NIP100P33420 NAB2YGL122C 1578 nt14.39□□□□□ -0.11
NIP100P33420 YJR120WYJR120W 351 nt14.38□□□□□ -0.11
NIP100P33420 RPP2BYDR382W 333 nt14.25□□□□□ -0.13
NIP100P33420 SRB2YHR041C 633 nt14.19□□□□□ -0.14
NIP100P33420 FIS1YIL065C 468 nt14.18□□□□□ -0.14
NIP100P33420 DAL1YIR027C 1383 nt14.16□□□□□ -0.14
NIP100P33420 INM2YDR287W 879 nt14.12□□□□□ -0.15
NIP100P33420 SPT5YML010W 3192 nt14.11□□□□□ -0.15
NIP100P33420 FPR4YLR449W 1179 nt14.07□□□□□ -0.16
NIP100P33420 PHO4YFR034C 939 nt14.03□□□□□ -0.16
NIP100P33420 SHU1YHL006C 453 nt14.03□□□□□ -0.16
NIP100P33420 BDH2YAL061W 1254 nt13.96□□□□□ -0.17
NIP100P33420 YBL100CYBL100C 315 nt13.94□□□□□ -0.18
NIP100P33420 WWM1YFL010C 636 nt13.92□□□□□ -0.18
NIP100P33420 YKL097CYKL097C 411 nt13.9□□□□□ -0.18
NIP100P33420 YAL037C-BYAL037C-B 975 nt13.83□□□□□ -0.2
NIP100P33420 YPS1YLR120C 1710 nt13.83□□□□□ -0.2
NIP100P33420 YGR021WYGR021W 873 nt13.81□□□□□ -0.2
NIP100P33420 FUN26YAL022C 1554 nt13.78□□□□□ -0.2
NIP100P33420 LSM3YLR438C-A 270 nt13.76□□□□□ -0.21
NIP100P33420 MEP2YNL142W 1500 nt13.75□□□□□ -0.21
NIP100P33420 HOM6YJR139C 1080 nt13.75□□□□□ -0.21
NIP100P33420 YDR095CYDR095C 411 nt13.73□□□□□ -0.21
NIP100P33420 YFL021C-AYFL021C-A 855 nt13.73□□□□□ -0.21
NIP100P33420 TRM9YML014W 840 nt13.71□□□□□ -0.21
NIP100P33420 YHR165W-AYHR165W-A 312 nt13.65□□□□□ -0.22
NIP100P33420 SSA4YER103W 1929 nt13.63□□□□□ -0.23
NIP100P33420 MNP1YGL068W 585 nt13.63□□□□□ -0.23
NIP100P33420 CCT6YDR188W 1641 nt13.61□□□□□ -0.23
NIP100P33420 ALF1YNL148C 765 nt13.59□□□□□ -0.23
NIP100P33420 RKM5YLR137W 1104 nt13.55□□□□□ -0.24
NIP100P33420 DCW1YKL046C 1350 nt13.52□□□□□ -0.25
NIP100P33420 SUF2tP(AGG)C 72 nt13.49□□□□□ -0.25
NIP100P33420 SUF10tP(AGG)N 72 nt13.49□□□□□ -0.25
NIP100P33420 RPP2AYOL039W 321 nt13.45□□□□□ -0.26
NIP100P33420 SIS1YNL007C 1059 nt13.44□□□□□ -0.26
NIP100P33420 PTP1YDL230W 1008 nt13.43□□□□□ -0.26
NIP100P33420 YOR139CYOR139C 393 nt13.39□□□□□ -0.27
NIP100P33420 YOL037CYOL037C 354 nt13.37□□□□□ -0.27
NIP100P33420 EMI2YDR516C 1503 nt13.35□□□□□ -0.27
NIP100P33420 CAC2YML102W 1407 nt13.33□□□□□ -0.28
NIP100P33420 NPL3YDR432W 1245 nt13.29□□□□□ -0.28
NIP100P33420 YMR090WYMR090W 684 nt13.27□□□□□ -0.29
Retrieved 100 of 7,029 protein–RNA pairs in 15.4 ms