RNA–Protein interactions for RNA: YPR028W

YOP1, Transcript of Membrane protein that interacts with Yip1p to mediate membrane traffic, yeastyeast

Gene YOP1, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOP1YPR028W TY1A-ER2P0CX66 440 aa6.54□□□□□ -1.36
YOP1YPR028W TY1A-GR3P0CX67 440 aa6.54□□□□□ -1.36
YOP1YPR028W TY1A-LR1P0CX68 440 aa6.54□□□□□ -1.36
YOP1YPR028W TY1A-MR2P0CX69 440 aa6.54□□□□□ -1.36
YOP1YPR028W TY1A-JR2P47099 440 aa6.54□□□□□ -1.36
YOP1YPR028W TY1A-DR1Q03856 440 aa6.54□□□□□ -1.36
YOP1YPR028W TY1A-ML1Q04706 440 aaKnown RBP6.54□□□□□ -1.36
YOP1YPR028W TY1A-BRQ12217 440 aa6.54□□□□□ -1.36
YOP1YPR028W TY1A-NL2Q12470 440 aa6.54□□□□□ -1.36
YOP1YPR028W TY1A-GR2Q12485 440 aa6.54□□□□□ -1.36
YOP1YPR028W SEC2P17065 759 aa6.53□□□□□ -1.36
YOP1YPR028W IFH1P39520 1085 aa6.52□□□□□ -1.37
YOP1YPR028W BDP1P46678 594 aa6.52□□□□□ -1.37
YOP1YPR028W HED1Q03937 162 aa6.5□□□□□ -1.37
YOP1YPR028W YDR444WQ04093 687 aa6.5□□□□□ -1.37
YOP1YPR028W PAT1P25644 796 aaKnown RBP6.48□□□□□ -1.37
YOP1YPR028W RRN7P40992 514 aa6.48□□□□□ -1.37
YOP1YPR028W ORC6P38826 435 aa6.45□□□□□ -1.38
YOP1YPR028W LCB5Q06147 687 aaKnown RBP6.43□□□□□ -1.38
YOP1YPR028W REF2P42073 533 aaPredicted RBP6.42□□□□□ -1.38
YOP1YPR028W ASH1P34233 588 aa6.41□□□□□ -1.38
YOP1YPR028W MVP1P40959 511 aaKnown RBP6.41□□□□□ -1.38
YOP1YPR028W YDL176WQ12027 708 aa6.41□□□□□ -1.38
YOP1YPR028W YPR109WQ06104 294 aa6.39□□□□□ -1.39
YOP1YPR028W MET32Q12041 191 aa6.38□□□□□ -1.39
YOP1YPR028W AFT1P22149 690 aa6.37□□□□□ -1.39
YOP1YPR028W HST3P53687 447 aa6.37□□□□□ -1.39
YOP1YPR028W RGR1P19263 1082 aa6.34□□□□□ -1.39
YOP1YPR028W RRD1P40454 393 aaKnown RBP6.34□□□□□ -1.39
YOP1YPR028W KEX2P13134 814 aa6.33□□□□□ -1.4
YOP1YPR028W COX6P00427 148 aa6.32□□□□□ -1.4
YOP1YPR028W ERF2Q06551 359 aa6.32□□□□□ -1.4
YOP1YPR028W MOD5P07884 428 aa6.31□□□□□ -1.4
YOP1YPR028W MAK21Q12176 1025 aaKnown RBP6.31□□□□□ -1.4
YOP1YPR028W PAC1P39946 494 aaKnown RBP6.3□□□□□ -1.4
YOP1YPR028W YPR148CQ06523 435 aa6.3□□□□□ -1.4
YOP1YPR028W YJR115WP47152 169 aa6.29□□□□□ -1.4
YOP1YPR028W MTC5Q03897 1148 aa6.29□□□□□ -1.4
YOP1YPR028W PUS5Q06244 254 aa6.29□□□□□ -1.4
YOP1YPR028W TUB4P53378 473 aa6.23□□□□□ -1.41
YOP1YPR028W CAF120P53836 1060 aa6.23□□□□□ -1.41
YOP1YPR028W AGE1Q04412 482 aa6.23□□□□□ -1.41
YOP1YPR028W ACO2P39533 789 aa6.21□□□□□ -1.42
YOP1YPR028W VPS70P47161 811 aa6.21□□□□□ -1.42
YOP1YPR028W MSB3P48566 633 aaPredicted RBP6.2□□□□□ -1.42
YOP1YPR028W TRK2P28584 889 aa6.18□□□□□ -1.42
YOP1YPR028W YLR346CQ06139 101 aa6.16□□□□□ -1.42
YOP1YPR028W RTF1P53064 558 aa6.15□□□□□ -1.42
YOP1YPR028W OPT2Q06593 877 aa6.15□□□□□ -1.42
YOP1YPR028W UGA3P26370 528 aa6.14□□□□□ -1.43
YOP1YPR028W CLB5P30283 435 aa6.14□□□□□ -1.43
YOP1YPR028W PSE1P32337 1089 aaKnown RBP6.14□□□□□ -1.43
YOP1YPR028W KXD1P53158 218 aa6.14□□□□□ -1.43
YOP1YPR028W YGR035CP53222 116 aa6.14□□□□□ -1.43
YOP1YPR028W YNL115CP53925 644 aa6.14□□□□□ -1.43
YOP1YPR028W SYH1Q02875 849 aaKnown RBP6.14□□□□□ -1.43
YOP1YPR028W TPD3P31383 635 aa6.13□□□□□ -1.43
YOP1YPR028W SRF1Q12516 437 aa6.13□□□□□ -1.43
YOP1YPR028W PTK2P47116 818 aaKnown RBP6.12□□□□□ -1.43
YOP1YPR028W HXT10P43581 546 aa6.11□□□□□ -1.43
YOP1YPR028W GLY1P37303 387 aaKnown RBP6.08□□□□□ -1.44
YOP1YPR028W HPF1Q05164 967 aa6.08□□□□□ -1.44
YOP1YPR028W YIR007WP40566 764 aa6.07□□□□□ -1.44
YOP1YPR028W NUP85P46673 744 aa6.06□□□□□ -1.44
YOP1YPR028W PDC1P06169 563 aaKnown RBP6.05□□□□□ -1.44
YOP1YPR028W SIT4P20604 311 aa6.05□□□□□ -1.44
YOP1YPR028W SCW11P53189 542 aa6.05□□□□□ -1.44
YOP1YPR028W TYW1Q08960 810 aaKnown RBP6.05□□□□□ -1.44
YOP1YPR028W MIP1P15801 1254 aa6.03□□□□□ -1.44
YOP1YPR028W KIP2P28743 706 aa6.03□□□□□ -1.44
YOP1YPR028W TY1A-BLQ12266 440 aa6.03□□□□□ -1.44
YOP1YPR028W PBS2P08018 668 aa6.01□□□□□ -1.45
YOP1YPR028W MRT4P33201 236 aaKnown RBP6□□□□□ -1.45
YOP1YPR028W ICP55P40051 511 aa6□□□□□ -1.45
YOP1YPR028W RTT106P40161 455 aa6□□□□□ -1.45
YOP1YPR028W IXR1P33417 597 aa5.99□□□□□ -1.45
YOP1YPR028W TEA1P47988 759 aa5.99□□□□□ -1.45
YOP1YPR028W YPR204WQ08995 1032 aa5.99□□□□□ -1.45
YOP1YPR028W ALR1Q08269 859 aa5.98□□□□□ -1.45
YOP1YPR028W NIS1P53939 407 aa5.97□□□□□ -1.45
YOP1YPR028W SLY41P22215 453 aa5.96□□□□□ -1.46
YOP1YPR028W CKB1P43639 278 aa5.96□□□□□ -1.46
YOP1YPR028W RPA14P50106 137 aa5.96□□□□□ -1.46
YOP1YPR028W PUS1Q12211 544 aaKnown RBP5.96□□□□□ -1.46
YOP1YPR028W LSB3P43603 459 aaKnown RBP5.95□□□□□ -1.46
YOP1YPR028W UBP2Q01476 1272 aa5.95□□□□□ -1.46
YOP1YPR028W MAM3Q12296 706 aa5.95□□□□□ -1.46
YOP1YPR028W LSC2P53312 427 aa5.94□□□□□ -1.46
YOP1YPR028W YPR097WQ06839 1073 aa5.94□□□□□ -1.46
YOP1YPR028W YDL206WQ12424 762 aa5.93□□□□□ -1.46
YOP1YPR028W ARG82P07250 355 aa5.92□□□□□ -1.46
YOP1YPR028W PUS6P53294 404 aa5.92□□□□□ -1.46
YOP1YPR028W TBF1Q02457 562 aa5.92□□□□□ -1.46
YOP1YPR028W DPH6Q12429 685 aa5.92□□□□□ -1.46
YOP1YPR028W AAD14P42884 376 aa5.9□□□□□ -1.46
YOP1YPR028W FPK1P53739 893 aa5.89□□□□□ -1.47
YOP1YPR028W YMR196WQ04336 1088 aa5.89□□□□□ -1.47
YOP1YPR028W PHM7Q12252 991 aa5.89□□□□□ -1.47
YOP1YPR028W IES2P40154 320 aa5.88□□□□□ -1.47
YOP1YPR028W ROG3P43602 733 aa5.88□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms