RNA–Protein interactions for RNA: YPL230W

USV1, Transcript of Putative transcription factor containing a C2H2 zinc finger, yeastyeast

Gene USV1, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USV1YPL230W TY1A-GR3P0CX67 440 aa8.37□□□□□ -1.07
USV1YPL230W TY1A-LR1P0CX68 440 aa8.37□□□□□ -1.07
USV1YPL230W TY1A-MR2P0CX69 440 aa8.37□□□□□ -1.07
USV1YPL230W AIR1P40507 360 aaKnown RBP8.37□□□□□ -1.07
USV1YPL230W TY1A-JR2P47099 440 aa8.37□□□□□ -1.07
USV1YPL230W TY1A-DR1Q03856 440 aa8.37□□□□□ -1.07
USV1YPL230W TY1A-ML1Q04706 440 aaKnown RBP8.37□□□□□ -1.07
USV1YPL230W TY1A-BRQ12217 440 aa8.37□□□□□ -1.07
USV1YPL230W TY1A-NL2Q12470 440 aa8.37□□□□□ -1.07
USV1YPL230W TY1A-GR2Q12485 440 aa8.37□□□□□ -1.07
USV1YPL230W RQC2Q12532 1038 aaKnown RBP8.37□□□□□ -1.07
USV1YPL230W SEC2P17065 759 aa8.36□□□□□ -1.07
USV1YPL230W RRN7P40992 514 aa8.36□□□□□ -1.07
USV1YPL230W FRK1Q03002 865 aaPredicted RBP8.36□□□□□ -1.07
USV1YPL230W YPR109WQ06104 294 aa8.36□□□□□ -1.07
USV1YPL230W LAM6Q08001 693 aa8.35□□□□□ -1.07
USV1YPL230W RGR1P19263 1082 aa8.34□□□□□ -1.07
USV1YPL230W CLA4P48562 842 aa8.33□□□□□ -1.08
USV1YPL230W GBP2P25555 427 aaKnown RBP RIP-Chip data8.3□□□□□ -1.08not detected
USV1YPL230W BDP1P46678 594 aa8.3□□□□□ -1.08
USV1YPL230W YPL062WQ02781 134 aa8.29□□□□□ -1.08
USV1YPL230W GAR1P28007 205 aaKnown RBP8.28□□□□□ -1.08
USV1YPL230W CDC4P07834 779 aa8.27□□□□□ -1.09
USV1YPL230W KEX2P13134 814 aa8.25□□□□□ -1.09
USV1YPL230W CKB1P43639 278 aa8.25□□□□□ -1.09
USV1YPL230W PBS2P08018 668 aa8.23□□□□□ -1.09
USV1YPL230W HED1Q03937 162 aa8.23□□□□□ -1.09
USV1YPL230W PSE1P32337 1089 aaKnown RBP8.21□□□□□ -1.1
USV1YPL230W ERF2Q06551 359 aa8.21□□□□□ -1.1
USV1YPL230W CLB5P30283 435 aa8.19□□□□□ -1.1
USV1YPL230W MAM3Q12296 706 aa8.16□□□□□ -1.1
USV1YPL230W PAC1P39946 494 aaKnown RBP8.15□□□□□ -1.1
USV1YPL230W TUB4P53378 473 aa8.13□□□□□ -1.11
USV1YPL230W MET22P32179 357 aa8.12□□□□□ -1.11
USV1YPL230W RTF1P53064 558 aa8.11□□□□□ -1.11
USV1YPL230W HST3P53687 447 aa8.11□□□□□ -1.11
USV1YPL230W ENV9Q08651 330 aa8.11□□□□□ -1.11
USV1YPL230W MOD5P07884 428 aa8.1□□□□□ -1.11
USV1YPL230W ASH1P34233 588 aa8.1□□□□□ -1.11
USV1YPL230W YDR444WQ04093 687 aa8.09□□□□□ -1.11
USV1YPL230W AGE1Q04412 482 aa8.09□□□□□ -1.11
USV1YPL230W YNL115CP53925 644 aa8.08□□□□□ -1.12
USV1YPL230W PUS5Q06244 254 aa8.08□□□□□ -1.12
USV1YPL230W MET32Q12041 191 aa8.08□□□□□ -1.12
USV1YPL230W AFT1P22149 690 aa8.07□□□□□ -1.12
USV1YPL230W IES2P40154 320 aa8.06□□□□□ -1.12
USV1YPL230W TEA1P47988 759 aa8.06□□□□□ -1.12
USV1YPL230W DSF2P38213 736 aa8.04□□□□□ -1.12
USV1YPL230W KXD1P53158 218 aa8.04□□□□□ -1.12
USV1YPL230W SIT4P20604 311 aa8.01□□□□□ -1.13
USV1YPL230W LCB5Q06147 687 aaKnown RBP8□□□□□ -1.13
USV1YPL230W NIS1P53939 407 aa7.99□□□□□ -1.13
USV1YPL230W SYH1Q02875 849 aaKnown RBP7.97□□□□□ -1.13
USV1YPL230W SPB4P25808 606 aaPredicted RBP7.96□□□□□ -1.14
USV1YPL230W HXT10P43581 546 aa7.96□□□□□ -1.14
USV1YPL230W YJR115WP47152 169 aa7.96□□□□□ -1.14
USV1YPL230W NUP42P49686 430 aaKnown RBP7.96□□□□□ -1.14
USV1YPL230W SLY41P22215 453 aa7.95□□□□□ -1.14
USV1YPL230W DMA1P38823 416 aa7.95□□□□□ -1.14
USV1YPL230W RRD1P40454 393 aaKnown RBP7.95□□□□□ -1.14
USV1YPL230W YMR196WQ04336 1088 aa7.95□□□□□ -1.14
USV1YPL230W TPD3P31383 635 aa7.94□□□□□ -1.14
USV1YPL230W SAS10Q12136 610 aaPredicted RBP7.94□□□□□ -1.14
USV1YPL230W MSB3P48566 633 aaPredicted RBP7.92□□□□□ -1.14
USV1YPL230W TBF1Q02457 562 aa7.92□□□□□ -1.14
USV1YPL230W PDC1P06169 563 aaKnown RBP7.91□□□□□ -1.14
USV1YPL230W FPK1P53739 893 aa7.91□□□□□ -1.14
USV1YPL230W DIT2P21595 489 aa7.9□□□□□ -1.14
USV1YPL230W UGA3P26370 528 aa7.9□□□□□ -1.14
USV1YPL230W ALR1Q08269 859 aa7.9□□□□□ -1.14
USV1YPL230W KIP2P28743 706 aa7.89□□□□□ -1.15
USV1YPL230W YDL176WQ12027 708 aa7.89□□□□□ -1.15
USV1YPL230W SRF1Q12516 437 aa7.88□□□□□ -1.15
USV1YPL230W PUS6P53294 404 aa7.86□□□□□ -1.15
USV1YPL230W YDL206WQ12424 762 aa7.86□□□□□ -1.15
USV1YPL230W RPA14P50106 137 aa7.85□□□□□ -1.15
USV1YPL230W YLR346CQ06139 101 aa7.84□□□□□ -1.15
USV1YPL230W IXR1P33417 597 aa7.83□□□□□ -1.16
USV1YPL230W PTK2P47116 818 aaKnown RBP7.83□□□□□ -1.16
USV1YPL230W YPR097WQ06839 1073 aa7.83□□□□□ -1.16
USV1YPL230W CAF120P53836 1060 aa7.8□□□□□ -1.16
USV1YPL230W TRM1P15565 570 aaKnown RBP7.79□□□□□ -1.16
USV1YPL230W HST2P53686 357 aa7.79□□□□□ -1.16
USV1YPL230W OPT2Q06593 877 aa7.79□□□□□ -1.16
USV1YPL230W SCJ1P25303 377 aa7.78□□□□□ -1.16
USV1YPL230W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.78□□□□□ -1.16not detected
USV1YPL230W TYW1Q08960 810 aaKnown RBP7.78□□□□□ -1.16
USV1YPL230W ATF2P53296 535 aa7.77□□□□□ -1.17
USV1YPL230W MMP1Q12372 583 aa7.77□□□□□ -1.17
USV1YPL230W RTT106P40161 455 aa7.76□□□□□ -1.17
USV1YPL230W MRT4P33201 236 aaKnown RBP7.75□□□□□ -1.17
USV1YPL230W GLN1P32288 370 aaKnown RBP7.74□□□□□ -1.17
USV1YPL230W ACO2P39533 789 aa7.74□□□□□ -1.17
USV1YPL230W NUP85P46673 744 aa7.73□□□□□ -1.17
USV1YPL230W SCW11P53189 542 aa7.71□□□□□ -1.18
USV1YPL230W MIP1P15801 1254 aa7.7□□□□□ -1.18
USV1YPL230W GLY1P37303 387 aaKnown RBP7.7□□□□□ -1.18
USV1YPL230W ESS1P22696 170 aa7.69□□□□□ -1.18
USV1YPL230W YGR035CP53222 116 aa7.67□□□□□ -1.18
USV1YPL230W ARG82P07250 355 aa7.66□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms