RNA–Protein interactions for RNA: YOR193W

PEX27, Transcript of Peripheral peroxisomal membrane protein, yeastyeast

Gene PEX27, Length 1,131 nt, Biotype protein coding, Subcellular localisation Peroxisome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX27YOR193W TY1A-NL2Q12470 440 aa10.6□□□□□ -0.71
PEX27YOR193W TY1A-GR2Q12485 440 aa10.6□□□□□ -0.71
PEX27YOR193W NPL4P33755 580 aa10.59□□□□□ -0.71
PEX27YOR193W SEC2P17065 759 aa10.57□□□□□ -0.72
PEX27YOR193W TRK1P12685 1235 aa10.56□□□□□ -0.72
PEX27YOR193W GCD11P32481 527 aaKnown RBP10.55□□□□□ -0.72
PEX27YOR193W SAS10Q12136 610 aaPredicted RBP10.54□□□□□ -0.72
PEX27YOR193W DMA1P38823 416 aa10.53□□□□□ -0.72
PEX27YOR193W ERG12P07277 443 aa10.51□□□□□ -0.73
PEX27YOR193W PSE1P32337 1089 aaKnown RBP10.49□□□□□ -0.73
PEX27YOR193W CST6P40535 587 aa10.48□□□□□ -0.73
PEX27YOR193W SPT16P32558 1035 aaKnown RBP10.46□□□□□ -0.73
PEX27YOR193W MAM3Q12296 706 aa10.45□□□□□ -0.74
PEX27YOR193W DSF2P38213 736 aa10.44□□□□□ -0.74
PEX27YOR193W ERF2Q06551 359 aa10.43□□□□□ -0.74
PEX27YOR193W LAM6Q08001 693 aa10.43□□□□□ -0.74
PEX27YOR193W KEX2P13134 814 aa10.42□□□□□ -0.74
PEX27YOR193W RRN7P40992 514 aa10.42□□□□□ -0.74
PEX27YOR193W IES2P40154 320 aa10.4□□□□□ -0.74
PEX27YOR193W CLA4P48562 842 aa10.4□□□□□ -0.74
PEX27YOR193W CLB5P30283 435 aa10.38□□□□□ -0.75
PEX27YOR193W AIR1P40507 360 aaKnown RBP10.38□□□□□ -0.75
PEX27YOR193W PAT1P25644 796 aaKnown RBP10.36□□□□□ -0.75
PEX27YOR193W NUP42P49686 430 aaKnown RBP10.36□□□□□ -0.75
PEX27YOR193W BDP1P46678 594 aa10.34□□□□□ -0.75
PEX27YOR193W FRK1Q03002 865 aaPredicted RBP10.34□□□□□ -0.75
PEX27YOR193W PAC1P39946 494 aaKnown RBP10.3□□□□□ -0.76
PEX27YOR193W AGE1Q04412 482 aa10.3□□□□□ -0.76
PEX27YOR193W RTF1P53064 558 aa10.29□□□□□ -0.76
PEX27YOR193W RGA1P39083 1007 aa10.28□□□□□ -0.76
PEX27YOR193W SIT4P20604 311 aa10.27□□□□□ -0.77
PEX27YOR193W MOD5P07884 428 aa10.26□□□□□ -0.77
PEX27YOR193W DIT2P21595 489 aa10.26□□□□□ -0.77
PEX27YOR193W SPB4P25808 606 aaPredicted RBP10.26□□□□□ -0.77
PEX27YOR193W BRE2P43132 505 aa10.26□□□□□ -0.77
PEX27YOR193W TUB4P53378 473 aa10.26□□□□□ -0.77
PEX27YOR193W CDC4P07834 779 aa10.25□□□□□ -0.77
PEX27YOR193W TEA1P47988 759 aa10.25□□□□□ -0.77
PEX27YOR193W YNL115CP53925 644 aa10.25□□□□□ -0.77
PEX27YOR193W HED1Q03937 162 aa10.24□□□□□ -0.77
PEX27YOR193W NIS1P53939 407 aa10.22□□□□□ -0.77
PEX27YOR193W GCR2Q01722 534 aa10.18□□□□□ -0.78
PEX27YOR193W RGA2Q06407 1009 aa10.17□□□□□ -0.78
PEX27YOR193W FPK1P53739 893 aa10.12□□□□□ -0.79
PEX27YOR193W PUS5Q06244 254 aa10.12□□□□□ -0.79
PEX27YOR193W MET32Q12041 191 aa10.11□□□□□ -0.79
PEX27YOR193W TPD3P31383 635 aa10.09□□□□□ -0.79
PEX27YOR193W KXD1P53158 218 aa10.08□□□□□ -0.8
PEX27YOR193W SLY41P22215 453 aa10.07□□□□□ -0.8
PEX27YOR193W YPL062WQ02781 134 aa10.06□□□□□ -0.8
PEX27YOR193W ASH1P34233 588 aa10.05□□□□□ -0.8
PEX27YOR193W YMR196WQ04336 1088 aa10.05□□□□□ -0.8
PEX27YOR193W PDC1P06169 563 aaKnown RBP10.04□□□□□ -0.8
PEX27YOR193W AFT1P22149 690 aa10.04□□□□□ -0.8
PEX27YOR193W HXT10P43581 546 aa10.04□□□□□ -0.8
PEX27YOR193W RRD1P40454 393 aaKnown RBP10.03□□□□□ -0.8
PEX27YOR193W GAR1P28007 205 aaKnown RBP10.02□□□□□ -0.81
PEX27YOR193W MET22P32179 357 aa10.02□□□□□ -0.81
PEX27YOR193W HST2P53686 357 aa10.01□□□□□ -0.81
PEX27YOR193W SCJ1P25303 377 aa10□□□□□ -0.81
PEX27YOR193W PUS6P53294 404 aa9.99□□□□□ -0.81
PEX27YOR193W ENV9Q08651 330 aa9.99□□□□□ -0.81
PEX27YOR193W HST3P53687 447 aa9.98□□□□□ -0.81
PEX27YOR193W RPA14P50106 137 aa9.96□□□□□ -0.82
PEX27YOR193W ATF2P53296 535 aa9.96□□□□□ -0.82
PEX27YOR193W YNR021WP53723 404 aaKnown RBP9.96□□□□□ -0.82
PEX27YOR193W YPR097WQ06839 1073 aa9.95□□□□□ -0.82
PEX27YOR193W YDL206WQ12424 762 aa9.95□□□□□ -0.82
PEX27YOR193W TRM1P15565 570 aaKnown RBP9.94□□□□□ -0.82
PEX27YOR193W BUB1P41695 1021 aaKnown RBP RIP-Chip data9.94□□□□□ -0.82not detected
PEX27YOR193W SYH1Q02875 849 aaKnown RBP9.94□□□□□ -0.82
PEX27YOR193W MMP1Q12372 583 aa9.94□□□□□ -0.82
PEX27YOR193W TBF1Q02457 562 aa9.93□□□□□ -0.82
PEX27YOR193W ALR1Q08269 859 aa9.93□□□□□ -0.82
PEX27YOR193W GBP2P25555 427 aaKnown RBP RIP-Chip data9.92□□□□□ -0.82not detected
PEX27YOR193W GLC3P32775 704 aa9.91□□□□□ -0.82
PEX27YOR193W YJR115WP47152 169 aa9.91□□□□□ -0.82
PEX27YOR193W YDR444WQ04093 687 aa9.91□□□□□ -0.82
PEX27YOR193W GLN1P32288 370 aaKnown RBP9.9□□□□□ -0.82
PEX27YOR193W LCB5Q06147 687 aaKnown RBP9.88□□□□□ -0.83
PEX27YOR193W ESS1P22696 170 aa9.87□□□□□ -0.83
PEX27YOR193W MSB3P48566 633 aaPredicted RBP9.87□□□□□ -0.83
PEX27YOR193W TYW1Q08960 810 aaKnown RBP9.84□□□□□ -0.83
PEX27YOR193W YJU3P28321 313 aa9.83□□□□□ -0.84
PEX27YOR193W KIP2P28743 706 aa9.83□□□□□ -0.84
PEX27YOR193W MRT4P33201 236 aaKnown RBP9.82□□□□□ -0.84
PEX27YOR193W IXR1P33417 597 aa9.81□□□□□ -0.84
PEX27YOR193W RSC30P38781 883 aa9.81□□□□□ -0.84
PEX27YOR193W AIM7Q12156 149 aa9.81□□□□□ -0.84
PEX27YOR193W KTR1P27810 393 aaKnown RBP9.8□□□□□ -0.84
PEX27YOR193W YDL176WQ12027 708 aa9.8□□□□□ -0.84
PEX27YOR193W UGA3P26370 528 aa9.77□□□□□ -0.85
PEX27YOR193W PTK2P47116 818 aaKnown RBP9.76□□□□□ -0.85
PEX27YOR193W VAC17P25591 423 aa9.75□□□□□ -0.85
PEX27YOR193W PKH3Q03306 898 aaPredicted RBP9.72□□□□□ -0.85
PEX27YOR193W RTT106P40161 455 aa9.7□□□□□ -0.86
PEX27YOR193W CSN12P47130 423 aa9.69□□□□□ -0.86
PEX27YOR193W OPT2Q06593 877 aa9.68□□□□□ -0.86
PEX27YOR193W SRF1Q12516 437 aa9.68□□□□□ -0.86
PEX27YOR193W ARG8P18544 423 aa9.66□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 107 ms