RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W TY1A-PR1P0CX58 440 aa7.59□□□□□ -1.19
PEP8YJL053W TY1A-ORP0CX59 440 aa7.59□□□□□ -1.19
PEP8YJL053W TY1A-PR2P0CX60 440 aa7.59□□□□□ -1.19
PEP8YJL053W TY1A-DR5P0CX65 440 aa7.59□□□□□ -1.19
PEP8YJL053W TY1A-ER2P0CX66 440 aa7.59□□□□□ -1.19
PEP8YJL053W TY1A-GR3P0CX67 440 aa7.59□□□□□ -1.19
PEP8YJL053W TY1A-LR1P0CX68 440 aa7.59□□□□□ -1.19
PEP8YJL053W TY1A-MR2P0CX69 440 aa7.59□□□□□ -1.19
PEP8YJL053W TY1A-JR2P47099 440 aa7.59□□□□□ -1.19
PEP8YJL053W TY1A-DR1Q03856 440 aa7.59□□□□□ -1.19
PEP8YJL053W TY1A-ML1Q04706 440 aaKnown RBP7.59□□□□□ -1.19
PEP8YJL053W TY1A-BRQ12217 440 aa7.59□□□□□ -1.19
PEP8YJL053W TY1A-NL2Q12470 440 aa7.59□□□□□ -1.19
PEP8YJL053W TY1A-GR2Q12485 440 aa7.59□□□□□ -1.19
PEP8YJL053W MET22P32179 357 aa7.57□□□□□ -1.2
PEP8YJL053W ORC6P38826 435 aa7.56□□□□□ -1.2
PEP8YJL053W HED1Q03937 162 aa7.56□□□□□ -1.2
PEP8YJL053W MVP1P40959 511 aaKnown RBP7.55□□□□□ -1.2
PEP8YJL053W ENV9Q08651 330 aa7.54□□□□□ -1.2
PEP8YJL053W YDR444WQ04093 687 aa7.53□□□□□ -1.2
PEP8YJL053W YPR109WQ06104 294 aa7.53□□□□□ -1.2
PEP8YJL053W MAK21Q12176 1025 aaKnown RBP7.51□□□□□ -1.21
PEP8YJL053W COX6P00427 148 aa7.49□□□□□ -1.21
PEP8YJL053W RGR1P19263 1082 aa7.47□□□□□ -1.21
PEP8YJL053W HST3P53687 447 aa7.47□□□□□ -1.21
PEP8YJL053W YPR148CQ06523 435 aa7.46□□□□□ -1.22
PEP8YJL053W KEX2P13134 814 aa7.45□□□□□ -1.22
PEP8YJL053W ASH1P34233 588 aa7.45□□□□□ -1.22
PEP8YJL053W VPS70P47161 811 aa7.45□□□□□ -1.22
PEP8YJL053W LCB5Q06147 687 aaKnown RBP7.41□□□□□ -1.22
PEP8YJL053W AFT1P22149 690 aa7.4□□□□□ -1.22
PEP8YJL053W ERF2Q06551 359 aa7.39□□□□□ -1.23
PEP8YJL053W MET32Q12041 191 aa7.39□□□□□ -1.23
PEP8YJL053W PAC1P39946 494 aaKnown RBP7.37□□□□□ -1.23
PEP8YJL053W PUS5Q06244 254 aa7.37□□□□□ -1.23
PEP8YJL053W MOD5P07884 428 aa7.33□□□□□ -1.24
PEP8YJL053W RRD1P40454 393 aaKnown RBP7.33□□□□□ -1.24
PEP8YJL053W YDL176WQ12027 708 aa7.33□□□□□ -1.24
PEP8YJL053W TUB4P53378 473 aa7.32□□□□□ -1.24
PEP8YJL053W YJR115WP47152 169 aa7.31□□□□□ -1.24
PEP8YJL053W CLB5P30283 435 aa7.28□□□□□ -1.24
PEP8YJL053W PSE1P32337 1089 aaKnown RBP7.27□□□□□ -1.25
PEP8YJL053W AGE1Q04412 482 aa7.27□□□□□ -1.25
PEP8YJL053W KXD1P53158 218 aa7.26□□□□□ -1.25
PEP8YJL053W RTF1P53064 558 aa7.24□□□□□ -1.25
PEP8YJL053W YNL115CP53925 644 aa7.24□□□□□ -1.25
PEP8YJL053W SRF1Q12516 437 aa7.24□□□□□ -1.25
PEP8YJL053W PBS2P08018 668 aa7.23□□□□□ -1.25
PEP8YJL053W UGA3P26370 528 aa7.23□□□□□ -1.25
PEP8YJL053W MSB3P48566 633 aaPredicted RBP7.23□□□□□ -1.25
PEP8YJL053W CAF120P53836 1060 aa7.23□□□□□ -1.25
PEP8YJL053W SYH1Q02875 849 aaKnown RBP7.23□□□□□ -1.25
PEP8YJL053W YLR346CQ06139 101 aa7.22□□□□□ -1.25
PEP8YJL053W MTC5Q03897 1148 aa7.21□□□□□ -1.26
PEP8YJL053W HXT10P43581 546 aa7.18□□□□□ -1.26
PEP8YJL053W CKB1P43639 278 aa7.18□□□□□ -1.26
PEP8YJL053W OPT2Q06593 877 aa7.16□□□□□ -1.26
PEP8YJL053W KIP2P28743 706 aa7.15□□□□□ -1.26
PEP8YJL053W TPD3P31383 635 aa7.15□□□□□ -1.26
PEP8YJL053W ACO2P39533 789 aa7.15□□□□□ -1.26
PEP8YJL053W TEA1P47988 759 aa7.15□□□□□ -1.26
PEP8YJL053W PTK2P47116 818 aaKnown RBP7.14□□□□□ -1.27
PEP8YJL053W MAM3Q12296 706 aa7.14□□□□□ -1.27
PEP8YJL053W TRK2P28584 889 aa7.13□□□□□ -1.27
PEP8YJL053W SIT4P20604 311 aa7.12□□□□□ -1.27
PEP8YJL053W YGR035CP53222 116 aa7.12□□□□□ -1.27
PEP8YJL053W TYW1Q08960 810 aaKnown RBP7.12□□□□□ -1.27
PEP8YJL053W PDC1P06169 563 aaKnown RBP7.1□□□□□ -1.27
PEP8YJL053W SLY41P22215 453 aa7.1□□□□□ -1.27
PEP8YJL053W TBF1Q02457 562 aa7.09□□□□□ -1.27
PEP8YJL053W SCW11P53189 542 aa7.08□□□□□ -1.28
PEP8YJL053W NIS1P53939 407 aa7.08□□□□□ -1.28
PEP8YJL053W ALR1Q08269 859 aa7.08□□□□□ -1.28
PEP8YJL053W IXR1P33417 597 aa7.07□□□□□ -1.28
PEP8YJL053W YMR196WQ04336 1088 aa7.07□□□□□ -1.28
PEP8YJL053W GLY1P37303 387 aaKnown RBP7.06□□□□□ -1.28
PEP8YJL053W IES2P40154 320 aa7.06□□□□□ -1.28
PEP8YJL053W NUP85P46673 744 aa7.06□□□□□ -1.28
PEP8YJL053W MIP1P15801 1254 aa7.05□□□□□ -1.28
PEP8YJL053W YIR007WP40566 764 aa7.04□□□□□ -1.28
PEP8YJL053W HPF1Q05164 967 aa7.03□□□□□ -1.28
PEP8YJL053W YDL206WQ12424 762 aa7.03□□□□□ -1.28
PEP8YJL053W RTT106P40161 455 aa7.02□□□□□ -1.29
PEP8YJL053W RPA14P50106 137 aa7.02□□□□□ -1.29
PEP8YJL053W PUS6P53294 404 aa7.02□□□□□ -1.29
PEP8YJL053W FPK1P53739 893 aa7□□□□□ -1.29
PEP8YJL053W MRT4P33201 236 aaKnown RBP6.99□□□□□ -1.29
PEP8YJL053W YPR097WQ06839 1073 aa6.99□□□□□ -1.29
PEP8YJL053W TY1A-BLQ12266 440 aa6.99□□□□□ -1.29
PEP8YJL053W UBP2Q01476 1272 aa6.98□□□□□ -1.29
PEP8YJL053W ARG82P07250 355 aa6.97□□□□□ -1.29
PEP8YJL053W DSF2P38213 736 aa6.97□□□□□ -1.29
PEP8YJL053W LSC2P53312 427 aa6.97□□□□□ -1.29
PEP8YJL053W YPR204WQ08995 1032 aa6.97□□□□□ -1.29
PEP8YJL053W NUP42P49686 430 aaKnown RBP6.95□□□□□ -1.3
PEP8YJL053W TRM1P15565 570 aaKnown RBP6.92□□□□□ -1.3
PEP8YJL053W ICP55P40051 511 aa6.92□□□□□ -1.3
PEP8YJL053W PUS1Q12211 544 aaKnown RBP6.92□□□□□ -1.3
PEP8YJL053W AAD14P42884 376 aa6.91□□□□□ -1.3
PEP8YJL053W SPB4P25808 606 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms