RNA–Protein interactions for RNA: YER161C

SPT2, Transcript of Protein involved in negative regulation of transcription, yeastyeast

Gene SPT2, Length 1,002 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT2YER161C TY1A-DR1Q03856 440 aa6.73□□□□□ -1.33
SPT2YER161C TY1A-ML1Q04706 440 aaKnown RBP6.73□□□□□ -1.33
SPT2YER161C TY1A-BRQ12217 440 aa6.73□□□□□ -1.33
SPT2YER161C TY1A-NL2Q12470 440 aa6.73□□□□□ -1.33
SPT2YER161C TY1A-GR2Q12485 440 aa6.73□□□□□ -1.33
SPT2YER161C GCD11P32481 527 aaKnown RBP6.72□□□□□ -1.33
SPT2YER161C MVP1P40959 511 aaKnown RBP6.72□□□□□ -1.33
SPT2YER161C SEC2P17065 759 aa6.71□□□□□ -1.34
SPT2YER161C SPT16P32558 1035 aaKnown RBP6.71□□□□□ -1.34
SPT2YER161C BRE2P43132 505 aa6.71□□□□□ -1.34
SPT2YER161C LAM6Q08001 693 aa6.71□□□□□ -1.34
SPT2YER161C PBS2P08018 668 aa6.7□□□□□ -1.34
SPT2YER161C AIR1P40507 360 aaKnown RBP6.7□□□□□ -1.34
SPT2YER161C RGR1P19263 1082 aa6.68□□□□□ -1.34
SPT2YER161C YPL062WQ02781 134 aa6.68□□□□□ -1.34
SPT2YER161C CLA4P48562 842 aa6.67□□□□□ -1.34
SPT2YER161C GCR2Q01722 534 aa6.67□□□□□ -1.34
SPT2YER161C YPR109WQ06104 294 aa6.67□□□□□ -1.34
SPT2YER161C SAS10Q12136 610 aaPredicted RBP6.67□□□□□ -1.34
SPT2YER161C RRN7P40992 514 aa6.65□□□□□ -1.34
SPT2YER161C CDC4P07834 779 aa6.64□□□□□ -1.35
SPT2YER161C PAT1P25644 796 aaKnown RBP6.64□□□□□ -1.35
SPT2YER161C FRK1Q03002 865 aaPredicted RBP6.64□□□□□ -1.35
SPT2YER161C ERF2Q06551 359 aa6.64□□□□□ -1.35
SPT2YER161C CKB1P43639 278 aa6.63□□□□□ -1.35
SPT2YER161C GAR1P28007 205 aaKnown RBP6.62□□□□□ -1.35
SPT2YER161C BDP1P46678 594 aa6.62□□□□□ -1.35
SPT2YER161C IES2P40154 320 aa6.61□□□□□ -1.35
SPT2YER161C MAM3Q12296 706 aa6.6□□□□□ -1.35
SPT2YER161C KEX2P13134 814 aa6.59□□□□□ -1.35
SPT2YER161C GBP2P25555 427 aaKnown RBP RIP-Chip data6.59□□□□□ -1.35not detected
SPT2YER161C HED1Q03937 162 aa6.59□□□□□ -1.35
SPT2YER161C DSF2P38213 736 aa6.57□□□□□ -1.36
SPT2YER161C NUP42P49686 430 aaKnown RBP6.57□□□□□ -1.36
SPT2YER161C PSE1P32337 1089 aaKnown RBP6.56□□□□□ -1.36
SPT2YER161C DIT2P21595 489 aa6.55□□□□□ -1.36
SPT2YER161C SPB4P25808 606 aaPredicted RBP6.54□□□□□ -1.36
SPT2YER161C CLB5P30283 435 aa6.54□□□□□ -1.36
SPT2YER161C MOD5P07884 428 aa6.52□□□□□ -1.37
SPT2YER161C PAC1P39946 494 aaKnown RBP6.52□□□□□ -1.37
SPT2YER161C MET22P32179 357 aa6.51□□□□□ -1.37
SPT2YER161C ENV9Q08651 330 aa6.51□□□□□ -1.37
SPT2YER161C RTF1P53064 558 aa6.5□□□□□ -1.37
SPT2YER161C AGE1Q04412 482 aa6.5□□□□□ -1.37
SPT2YER161C TUB4P53378 473 aa6.48□□□□□ -1.37
SPT2YER161C MET32Q12041 191 aa6.48□□□□□ -1.37
SPT2YER161C AFT1P22149 690 aa6.47□□□□□ -1.37
SPT2YER161C ASH1P34233 588 aa6.47□□□□□ -1.37
SPT2YER161C NIS1P53939 407 aa6.46□□□□□ -1.38
SPT2YER161C YNL115CP53925 644 aa6.45□□□□□ -1.38
SPT2YER161C YDR444WQ04093 687 aa6.45□□□□□ -1.38
SPT2YER161C HST3P53687 447 aa6.44□□□□□ -1.38
SPT2YER161C PUS5Q06244 254 aa6.44□□□□□ -1.38
SPT2YER161C SIT4P20604 311 aa6.43□□□□□ -1.38
SPT2YER161C TEA1P47988 759 aa6.43□□□□□ -1.38
SPT2YER161C TAF7Q05021 590 aa6.42□□□□□ -1.38
SPT2YER161C LCB5Q06147 687 aaKnown RBP6.42□□□□□ -1.38
SPT2YER161C SCJ1P25303 377 aa6.4□□□□□ -1.38
SPT2YER161C TPD3P31383 635 aa6.4□□□□□ -1.38
SPT2YER161C KXD1P53158 218 aa6.39□□□□□ -1.39
SPT2YER161C FPK1P53739 893 aa6.39□□□□□ -1.39
SPT2YER161C RRD1P40454 393 aaKnown RBP6.37□□□□□ -1.39
SPT2YER161C YJR115WP47152 169 aa6.37□□□□□ -1.39
SPT2YER161C YDL176WQ12027 708 aa6.37□□□□□ -1.39
SPT2YER161C GLC3P32775 704 aa6.36□□□□□ -1.39
SPT2YER161C HXT10P43581 546 aa6.36□□□□□ -1.39
SPT2YER161C SLY41P22215 453 aa6.35□□□□□ -1.39
SPT2YER161C PDC1P06169 563 aaKnown RBP6.34□□□□□ -1.39
SPT2YER161C MSB3P48566 633 aaPredicted RBP6.34□□□□□ -1.39
SPT2YER161C SYH1Q02875 849 aaKnown RBP6.34□□□□□ -1.39
SPT2YER161C YMR196WQ04336 1088 aa6.33□□□□□ -1.4
SPT2YER161C TYW1Q08960 810 aaKnown RBP6.31□□□□□ -1.4
SPT2YER161C ESS1P22696 170 aa6.29□□□□□ -1.4
SPT2YER161C RPA14P50106 137 aa6.28□□□□□ -1.4
SPT2YER161C ATF2P53296 535 aa6.28□□□□□ -1.4
SPT2YER161C ALR1Q08269 859 aa6.28□□□□□ -1.4
SPT2YER161C TRM1P15565 570 aaKnown RBP6.27□□□□□ -1.41
SPT2YER161C UGA3P26370 528 aa6.27□□□□□ -1.41
SPT2YER161C KTR1P27810 393 aaKnown RBP6.27□□□□□ -1.41
SPT2YER161C YJU3P28321 313 aa6.27□□□□□ -1.41
SPT2YER161C HST2P53686 357 aa6.27□□□□□ -1.41
SPT2YER161C YDL206WQ12424 762 aa6.27□□□□□ -1.41
SPT2YER161C PUS6P53294 404 aa6.26□□□□□ -1.41
SPT2YER161C YNR021WP53723 404 aaKnown RBP6.26□□□□□ -1.41
SPT2YER161C TBF1Q02457 562 aa6.26□□□□□ -1.41
SPT2YER161C YPR097WQ06839 1073 aa6.26□□□□□ -1.41
SPT2YER161C PTK2P47116 818 aaKnown RBP6.25□□□□□ -1.41
SPT2YER161C MMP1Q12372 583 aa6.25□□□□□ -1.41
SPT2YER161C KIP2P28743 706 aa6.24□□□□□ -1.41
SPT2YER161C MRT4P33201 236 aaKnown RBP6.24□□□□□ -1.41
SPT2YER161C ACO2P39533 789 aa6.24□□□□□ -1.41
SPT2YER161C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.23□□□□□ -1.41not detected
SPT2YER161C YLR346CQ06139 101 aa6.23□□□□□ -1.41
SPT2YER161C SRF1Q12516 437 aa6.23□□□□□ -1.41
SPT2YER161C IXR1P33417 597 aa6.22□□□□□ -1.41
SPT2YER161C RTT106P40161 455 aa6.22□□□□□ -1.41
SPT2YER161C CAF120P53836 1060 aa6.22□□□□□ -1.41
SPT2YER161C OPT2Q06593 877 aa6.22□□□□□ -1.41
SPT2YER161C GLN1P32288 370 aaKnown RBP6.21□□□□□ -1.42
SPT2YER161C ITT1Q04638 464 aa6.21□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms