RNA–Protein interactions for RNA: YDR008C

YDR008C, Transcript of Dubious open reading frame, yeastyeast

Gene YDR008C, Length 351 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR008CYDR008C TY1A-NL2Q12470 440 aa9.71□□□□□ -0.86
YDR008CYDR008C TY1A-GR2Q12485 440 aa9.71□□□□□ -0.86
YDR008CYDR008C SEC2P17065 759 aa9.7□□□□□ -0.86
YDR008CYDR008C CDC4P07834 779 aa9.68□□□□□ -0.86
YDR008CYDR008C GCD11P32481 527 aaKnown RBP9.66□□□□□ -0.86
YDR008CYDR008C ENV9Q08651 330 aa9.66□□□□□ -0.86
YDR008CYDR008C SPT16P32558 1035 aaKnown RBP9.64□□□□□ -0.87
YDR008CYDR008C BDP1P46678 594 aa9.64□□□□□ -0.87
YDR008CYDR008C TFB4Q12004 338 aa9.64□□□□□ -0.87
YDR008CYDR008C CSC1Q06538 782 aa9.62□□□□□ -0.87
YDR008CYDR008C NPL4P33755 580 aa9.61□□□□□ -0.87
YDR008CYDR008C KIC1P38692 1080 aa9.58□□□□□ -0.88
YDR008CYDR008C YDR444WQ04093 687 aa9.58□□□□□ -0.88
YDR008CYDR008C RRN7P40992 514 aa9.56□□□□□ -0.88
YDR008CYDR008C YDL176WQ12027 708 aa9.56□□□□□ -0.88
YDR008CYDR008C HED1Q03937 162 aa9.53□□□□□ -0.88
YDR008CYDR008C ORC6P38826 435 aa9.51□□□□□ -0.89
YDR008CYDR008C LCB5Q06147 687 aaKnown RBP9.47□□□□□ -0.89
YDR008CYDR008C MET32Q12041 191 aa9.46□□□□□ -0.9
YDR008CYDR008C ASH1P34233 588 aa9.45□□□□□ -0.9
YDR008CYDR008C MVP1P40959 511 aaKnown RBP9.42□□□□□ -0.9
YDR008CYDR008C ERF2Q06551 359 aa9.4□□□□□ -0.9
YDR008CYDR008C PAT1P25644 796 aaKnown RBP9.39□□□□□ -0.91
YDR008CYDR008C YPR109WQ06104 294 aa9.37□□□□□ -0.91
YDR008CYDR008C AFT1P22149 690 aa9.36□□□□□ -0.91
YDR008CYDR008C RRD1P40454 393 aaKnown RBP9.36□□□□□ -0.91
YDR008CYDR008C KEX2P13134 814 aa9.35□□□□□ -0.91
YDR008CYDR008C IFH1P39520 1085 aa9.35□□□□□ -0.91
YDR008CYDR008C REF2P42073 533 aaPredicted RBP9.35□□□□□ -0.91
YDR008CYDR008C PAC1P39946 494 aaKnown RBP9.33□□□□□ -0.92
YDR008CYDR008C PUS5Q06244 254 aa9.33□□□□□ -0.92
YDR008CYDR008C MOD5P07884 428 aa9.32□□□□□ -0.92
YDR008CYDR008C RGR1P19263 1082 aa9.32□□□□□ -0.92
YDR008CYDR008C HST3P53687 447 aa9.32□□□□□ -0.92
YDR008CYDR008C YJR115WP47152 169 aa9.29□□□□□ -0.92
YDR008CYDR008C MTC5Q03897 1148 aa9.25□□□□□ -0.93
YDR008CYDR008C CAF120P53836 1060 aa9.21□□□□□ -0.94
YDR008CYDR008C AGE1Q04412 482 aa9.21□□□□□ -0.94
YDR008CYDR008C COX6P00427 148 aa9.2□□□□□ -0.94
YDR008CYDR008C YPR148CQ06523 435 aa9.18□□□□□ -0.94
YDR008CYDR008C TUB4P53378 473 aa9.17□□□□□ -0.94
YDR008CYDR008C ACO2P39533 789 aa9.15□□□□□ -0.94
YDR008CYDR008C MAK21Q12176 1025 aaKnown RBP9.1□□□□□ -0.95
YDR008CYDR008C TRK2P28584 889 aa9.08□□□□□ -0.96
YDR008CYDR008C OPT2Q06593 877 aa9.08□□□□□ -0.96
YDR008CYDR008C VPS70P47161 811 aa9.06□□□□□ -0.96
YDR008CYDR008C MSB3P48566 633 aaPredicted RBP9.06□□□□□ -0.96
YDR008CYDR008C YGR035CP53222 116 aa9.02□□□□□ -0.97
YDR008CYDR008C PTK2P47116 818 aaKnown RBP9.01□□□□□ -0.97
YDR008CYDR008C YIR007WP40566 764 aa8.99□□□□□ -0.97
YDR008CYDR008C HPF1Q05164 967 aa8.99□□□□□ -0.97
YDR008CYDR008C UGA3P26370 528 aa8.97□□□□□ -0.97
YDR008CYDR008C SYH1Q02875 849 aaKnown RBP8.95□□□□□ -0.98
YDR008CYDR008C TPD3P31383 635 aa8.94□□□□□ -0.98
YDR008CYDR008C RTF1P53064 558 aa8.94□□□□□ -0.98
YDR008CYDR008C YNL115CP53925 644 aa8.94□□□□□ -0.98
YDR008CYDR008C HXT10P43581 546 aa8.93□□□□□ -0.98
YDR008CYDR008C KXD1P53158 218 aa8.93□□□□□ -0.98
YDR008CYDR008C YLR346CQ06139 101 aa8.93□□□□□ -0.98
YDR008CYDR008C SRF1Q12516 437 aa8.92□□□□□ -0.98
YDR008CYDR008C PSE1P32337 1089 aaKnown RBP8.9□□□□□ -0.98
YDR008CYDR008C GLY1P37303 387 aaKnown RBP8.9□□□□□ -0.98
YDR008CYDR008C PDC1P06169 563 aaKnown RBP8.89□□□□□ -0.99
YDR008CYDR008C TY1A-BLQ12266 440 aa8.88□□□□□ -0.99
YDR008CYDR008C SCW11P53189 542 aa8.86□□□□□ -0.99
YDR008CYDR008C SIT4P20604 311 aa8.85□□□□□ -0.99
YDR008CYDR008C NUP85P46673 744 aa8.85□□□□□ -0.99
YDR008CYDR008C TYW1Q08960 810 aaKnown RBP8.85□□□□□ -0.99
YDR008CYDR008C CLB5P30283 435 aa8.84□□□□□ -0.99
YDR008CYDR008C MIP1P15801 1254 aa8.82□□□□□ -1
YDR008CYDR008C ICP55P40051 511 aa8.79□□□□□ -1
YDR008CYDR008C LSB3P43603 459 aaKnown RBP8.79□□□□□ -1
YDR008CYDR008C KIP2P28743 706 aa8.78□□□□□ -1
YDR008CYDR008C MRT4P33201 236 aaKnown RBP8.77□□□□□ -1.01
YDR008CYDR008C NIS1P53939 407 aa8.76□□□□□ -1.01
YDR008CYDR008C IXR1P33417 597 aa8.75□□□□□ -1.01
YDR008CYDR008C PBS2P08018 668 aa8.73□□□□□ -1.01
YDR008CYDR008C PUS1Q12211 544 aaKnown RBP8.72□□□□□ -1.01
YDR008CYDR008C YPR204WQ08995 1032 aa8.71□□□□□ -1.02
YDR008CYDR008C SLY41P22215 453 aa8.7□□□□□ -1.02
YDR008CYDR008C MDJ1P35191 511 aa8.69□□□□□ -1.02
YDR008CYDR008C YDL206WQ12424 762 aa8.69□□□□□ -1.02
YDR008CYDR008C TEA1P47988 759 aa8.68□□□□□ -1.02
YDR008CYDR008C ALR1Q08269 859 aa8.68□□□□□ -1.02
YDR008CYDR008C RPA14P50106 137 aa8.67□□□□□ -1.02
YDR008CYDR008C YPR097WQ06839 1073 aa8.67□□□□□ -1.02
YDR008CYDR008C LSC2P53312 427 aa8.66□□□□□ -1.02
YDR008CYDR008C AAD14P42884 376 aa8.65□□□□□ -1.02
YDR008CYDR008C UBP2Q01476 1272 aa8.65□□□□□ -1.02
YDR008CYDR008C DLD1P32891 587 aa8.64□□□□□ -1.03
YDR008CYDR008C ROG3P43602 733 aa8.64□□□□□ -1.03
YDR008CYDR008C CCP1P00431 361 aa8.63□□□□□ -1.03
YDR008CYDR008C YJR098CP47139 656 aa8.62□□□□□ -1.03
YDR008CYDR008C TY1A-MR1Q04215 440 aa8.62□□□□□ -1.03
YDR008CYDR008C TCB1Q12466 1186 aa8.62□□□□□ -1.03
YDR008CYDR008C ARG82P07250 355 aa8.61□□□□□ -1.03
YDR008CYDR008C FPK1P53739 893 aa8.61□□□□□ -1.03
YDR008CYDR008C DPH6Q12429 685 aa8.61□□□□□ -1.03
YDR008CYDR008C PUS6P53294 404 aa8.6□□□□□ -1.03
YDR008CYDR008C NRD1P53617 575 aaKnown RBP RIP-Chip data8.6□□□□□ -1.03not detected
Retrieved 100 of 5,963 RNA–protein pairs in 54 ms